RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
FXR1-217ENST00000484042 BHMG1C9JSJ3 638 aaPredicted RBP12.24□□□□□ -0.45
FXR1-217ENST00000484042 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
FXR1-217ENST00000484042 ZBED2Q9BTP6 218 aa12.23□□□□□ -0.45
FXR1-217ENST00000484042 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
FXR1-217ENST00000484042 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
FXR1-217ENST00000484042 PTPN5P54829 565 aa12.21□□□□□ -0.45
FXR1-217ENST00000484042 NBR1Q14596 966 aa12.2□□□□□ -0.46
FXR1-217ENST00000484042 DPYSL4O14531 572 aa12.15□□□□□ -0.46
FXR1-217ENST00000484042 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
FXR1-217ENST00000484042 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
FXR1-217ENST00000484042 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
FXR1-217ENST00000484042 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
FXR1-217ENST00000484042 PDIA6Q15084 440 aa12.13□□□□□ -0.47
FXR1-217ENST00000484042 WNT2BQ93097 391 aa12.13□□□□□ -0.47
FXR1-217ENST00000484042 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
FXR1-217ENST00000484042 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
FXR1-217ENST00000484042 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
FXR1-217ENST00000484042 COL9A1P20849 921 aa12.08□□□□□ -0.48
FXR1-217ENST00000484042 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
FXR1-217ENST00000484042 SEMA3EO15041 775 aa12.07□□□□□ -0.48
FXR1-217ENST00000484042 PHF14O94880 888 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 PROX2Q3B8N5 592 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 RABGEF1Q9UJ41 708 aa12.06□□□□□ -0.48
FXR1-217ENST00000484042 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
FXR1-217ENST00000484042 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
FXR1-217ENST00000484042 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
FXR1-217ENST00000484042 EPAS1Q99814 870 aa11.98□□□□□ -0.49
FXR1-217ENST00000484042 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
FXR1-217ENST00000484042 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
FXR1-217ENST00000484042 A0A0G2JS52 829 aa11.96□□□□□ -0.49
FXR1-217ENST00000484042 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
FXR1-217ENST00000484042 RGS20O76081 388 aa11.96□□□□□ -0.49
FXR1-217ENST00000484042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
FXR1-217ENST00000484042 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
FXR1-217ENST00000484042 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
FXR1-217ENST00000484042 BCAMP50895 628 aa11.95□□□□□ -0.5
FXR1-217ENST00000484042 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
FXR1-217ENST00000484042 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
FXR1-217ENST00000484042 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
FXR1-217ENST00000484042 DDX12PQ92771 950 aa11.92□□□□□ -0.5
FXR1-217ENST00000484042 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
FXR1-217ENST00000484042 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
FXR1-217ENST00000484042 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
FXR1-217ENST00000484042 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
FXR1-217ENST00000484042 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
FXR1-217ENST00000484042 OSBPP22059 807 aa11.89□□□□□ -0.51
FXR1-217ENST00000484042 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
FXR1-217ENST00000484042 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
FXR1-217ENST00000484042 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
FXR1-217ENST00000484042 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
FXR1-217ENST00000484042 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
FXR1-217ENST00000484042 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
FXR1-217ENST00000484042 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
FXR1-217ENST00000484042 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
FXR1-217ENST00000484042 MAP3K7O43318 606 aa11.81□□□□□ -0.52
FXR1-217ENST00000484042 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
FXR1-217ENST00000484042 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.8□□□□□ -0.52
FXR1-217ENST00000484042 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
FXR1-217ENST00000484042 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
FXR1-217ENST00000484042 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
FXR1-217ENST00000484042 KCNC4Q03721 635 aa11.78□□□□□ -0.52
FXR1-217ENST00000484042 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
FXR1-217ENST00000484042 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
FXR1-217ENST00000484042 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
FXR1-217ENST00000484042 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
FXR1-217ENST00000484042 GPR37O15354 613 aa11.75□□□□□ -0.53
FXR1-217ENST00000484042 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
FXR1-217ENST00000484042 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
FXR1-217ENST00000484042 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
FXR1-217ENST00000484042 SMAPO00193 183 aa11.72□□□□□ -0.53
FXR1-217ENST00000484042 PRSS12P56730 875 aa11.72□□□□□ -0.53
FXR1-217ENST00000484042 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
FXR1-217ENST00000484042 ZMYND10O75800 440 aa11.7□□□□□ -0.54
FXR1-217ENST00000484042 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
FXR1-217ENST00000484042 PPP4CP60510 307 aa11.7□□□□□ -0.54
FXR1-217ENST00000484042 PTGDRQ13258 359 aa11.7□□□□□ -0.54
FXR1-217ENST00000484042 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
FXR1-217ENST00000484042 FCHSD2O94868 740 aa11.69□□□□□ -0.54
FXR1-217ENST00000484042 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
FXR1-217ENST00000484042 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
FXR1-217ENST00000484042 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
FXR1-217ENST00000484042 HIC1Q14526 733 aa11.67□□□□□ -0.54
FXR1-217ENST00000484042 TATDN2Q93075 761 aa11.67□□□□□ -0.54
FXR1-217ENST00000484042 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
FXR1-217ENST00000484042 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
FXR1-217ENST00000484042 GNPATO15228 680 aa11.64□□□□□ -0.55
FXR1-217ENST00000484042 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
FXR1-217ENST00000484042 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
FXR1-217ENST00000484042 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
FXR1-217ENST00000484042 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
FXR1-217ENST00000484042 Q6ZNB5 142 aa11.59□□□□□ -0.55
FXR1-217ENST00000484042 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
FXR1-217ENST00000484042 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
FXR1-217ENST00000484042 MTRQ99707 1265 aa11.58□□□□□ -0.56
FXR1-217ENST00000484042 FECHP22830 423 aa11.57□□□□□ -0.56
FXR1-217ENST00000484042 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms