RNA–Protein interactions for RNA: ENST00000483773.1

FBXO28-203, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-203ENST00000483773 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
FBXO28-203ENST00000483773 KANK1Q14678 1352 aa19.04■□□□□ 0.64
FBXO28-203ENST00000483773 NUP155O75694 1391 aa19.01■□□□□ 0.63
FBXO28-203ENST00000483773 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
FBXO28-203ENST00000483773 UNC13BO14795 1591 aa19■□□□□ 0.63
FBXO28-203ENST00000483773 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
FBXO28-203ENST00000483773 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
FBXO28-203ENST00000483773 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
FBXO28-203ENST00000483773 FAM135AQ9P2D6 1515 aa18.98■□□□□ 0.63
FBXO28-203ENST00000483773 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
FBXO28-203ENST00000483773 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
FBXO28-203ENST00000483773 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
FBXO28-203ENST00000483773 GGT6Q6P531 493 aa18.95■□□□□ 0.62
FBXO28-203ENST00000483773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.62
FBXO28-203ENST00000483773 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
FBXO28-203ENST00000483773 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
FBXO28-203ENST00000483773 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
FBXO28-203ENST00000483773 ARID4BQ4LE39 1312 aaPredicted RBP18.93■□□□□ 0.62
FBXO28-203ENST00000483773 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
FBXO28-203ENST00000483773 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
FBXO28-203ENST00000483773 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
FBXO28-203ENST00000483773 PZPP20742 1482 aa18.9■□□□□ 0.62
FBXO28-203ENST00000483773 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
FBXO28-203ENST00000483773 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
FBXO28-203ENST00000483773 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
FBXO28-203ENST00000483773 PKD2Q13563 968 aa18.88■□□□□ 0.61
FBXO28-203ENST00000483773 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
FBXO28-203ENST00000483773 TET3O43151 1660 aa18.85■□□□□ 0.61
FBXO28-203ENST00000483773 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
FBXO28-203ENST00000483773 ABCC3O15438 1527 aa18.84■□□□□ 0.61
FBXO28-203ENST00000483773 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
FBXO28-203ENST00000483773 SIGLEC1Q9BZZ2 1709 aa18.81■□□□□ 0.6
FBXO28-203ENST00000483773 MLECQ14165 292 aa18.81■□□□□ 0.6
FBXO28-203ENST00000483773 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
FBXO28-203ENST00000483773 ANKRD30BQ9BXX2 1392 aa18.8■□□□□ 0.6
FBXO28-203ENST00000483773 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
FBXO28-203ENST00000483773 TIMELESSQ9UNS1 1208 aa18.78■□□□□ 0.6
FBXO28-203ENST00000483773 CEP152O94986 1710 aa18.77■□□□□ 0.59
FBXO28-203ENST00000483773 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
FBXO28-203ENST00000483773 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
FBXO28-203ENST00000483773 PTPRTO14522 1441 aa18.75■□□□□ 0.59
FBXO28-203ENST00000483773 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
FBXO28-203ENST00000483773 E9PCH4 1651 aa18.75■□□□□ 0.59
FBXO28-203ENST00000483773 NPATQ14207 1427 aa18.74■□□□□ 0.59
FBXO28-203ENST00000483773 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
FBXO28-203ENST00000483773 FOXD1Q16676 465 aa18.72■□□□□ 0.59
FBXO28-203ENST00000483773 SLC52A1Q9NWF4 448 aa18.71■□□□□ 0.59
FBXO28-203ENST00000483773 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
FBXO28-203ENST00000483773 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
FBXO28-203ENST00000483773 NOS1P29475 1434 aa18.7■□□□□ 0.58
FBXO28-203ENST00000483773 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
FBXO28-203ENST00000483773 TRPM2O94759 1503 aa18.69■□□□□ 0.58
FBXO28-203ENST00000483773 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
FBXO28-203ENST00000483773 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
FBXO28-203ENST00000483773 STAC3Q96MF2 364 aa18.66■□□□□ 0.58
FBXO28-203ENST00000483773 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
FBXO28-203ENST00000483773 SPATA31D1Q6ZQQ2 1576 aa18.65■□□□□ 0.58
FBXO28-203ENST00000483773 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
FBXO28-203ENST00000483773 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
FBXO28-203ENST00000483773 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
FBXO28-203ENST00000483773 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
FBXO28-203ENST00000483773 MADDQ8WXG6 1647 aa18.63■□□□□ 0.57
FBXO28-203ENST00000483773 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
FBXO28-203ENST00000483773 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
FBXO28-203ENST00000483773 CFAP65Q6ZU64 1925 aaKnown RBP18.61■□□□□ 0.57
FBXO28-203ENST00000483773 TNRQ92752 1358 aa18.6■□□□□ 0.57
FBXO28-203ENST00000483773 C3P01024 1663 aa18.6■□□□□ 0.57
FBXO28-203ENST00000483773 RIMS1Q86UR5 1692 aaKnown RBP18.59■□□□□ 0.57
FBXO28-203ENST00000483773 NLRP1Q9C000 1473 aa18.58■□□□□ 0.57
FBXO28-203ENST00000483773 IDI1Q13907 227 aa18.58■□□□□ 0.56
FBXO28-203ENST00000483773 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
FBXO28-203ENST00000483773 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
FBXO28-203ENST00000483773 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
FBXO28-203ENST00000483773 SYNMO15061 1565 aa18.57■□□□□ 0.56
FBXO28-203ENST00000483773 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
FBXO28-203ENST00000483773 KIF1BO60333 1816 aa18.56■□□□□ 0.56
FBXO28-203ENST00000483773 PTPRMP28827 1452 aa18.56■□□□□ 0.56
FBXO28-203ENST00000483773 CEBPAP49715 358 aaPredicted RBP18.55■□□□□ 0.56
FBXO28-203ENST00000483773 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
FBXO28-203ENST00000483773 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
FBXO28-203ENST00000483773 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
FBXO28-203ENST00000483773 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
FBXO28-203ENST00000483773 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
FBXO28-203ENST00000483773 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
FBXO28-203ENST00000483773 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
FBXO28-203ENST00000483773 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
FBXO28-203ENST00000483773 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
FBXO28-203ENST00000483773 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
FBXO28-203ENST00000483773 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
FBXO28-203ENST00000483773 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
FBXO28-203ENST00000483773 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
FBXO28-203ENST00000483773 ZNF326Q5BKZ1 582 aaKnown RBP18.48■□□□□ 0.55
FBXO28-203ENST00000483773 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
FBXO28-203ENST00000483773 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
FBXO28-203ENST00000483773 TMEM131LA2VDJ0 1609 aa18.47■□□□□ 0.55
FBXO28-203ENST00000483773 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
FBXO28-203ENST00000483773 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
FBXO28-203ENST00000483773 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
FBXO28-203ENST00000483773 UHRF1BP1Q6BDS2 1440 aa18.43■□□□□ 0.54
FBXO28-203ENST00000483773 MYO3AQ8NEV4 1616 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms