RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 TPRNQ4KMQ1 711 aa6.4□□□□□ -1.38
ZNF561-216ENST00000483768 TYW1BQ6NUM6 668 aa6.4□□□□□ -1.38
ZNF561-216ENST00000483768 FBXW7Q969H0 707 aa6.4□□□□□ -1.38
ZNF561-216ENST00000483768 SLC4A5Q9BY07 1137 aa6.4□□□□□ -1.38
ZNF561-216ENST00000483768 PHF14O94880 888 aa6.39□□□□□ -1.39
ZNF561-216ENST00000483768 MRPL50Q8N5N7 158 aaKnown RBP6.39□□□□□ -1.39
ZNF561-216ENST00000483768 DDX12PQ92771 950 aa6.39□□□□□ -1.39
ZNF561-216ENST00000483768 RBM33Q96EV2 1170 aaKnown RBP6.39□□□□□ -1.39
ZNF561-216ENST00000483768 PPP1R3GB7ZBB8 358 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 COL9A1P20849 921 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 PROX2Q3B8N5 592 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 WNT2BQ93097 391 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 NBPF3Q9H094 633 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 WDR70Q9NW82 654 aa6.38□□□□□ -1.39
ZNF561-216ENST00000483768 BHMG1C9JSJ3 638 aaPredicted RBP6.37□□□□□ -1.39
ZNF561-216ENST00000483768 EPAS1Q99814 870 aa6.36□□□□□ -1.39
ZNF561-216ENST00000483768 E2F4Q16254 413 aa6.35□□□□□ -1.39
ZNF561-216ENST00000483768 C6orf132Q5T0Z8 1188 aa6.35□□□□□ -1.39
ZNF561-216ENST00000483768 THSD4Q6ZMP0 1018 aa6.35□□□□□ -1.39
ZNF561-216ENST00000483768 NBR1Q14596 966 aa6.34□□□□□ -1.39
ZNF561-216ENST00000483768 KIAA1468Q9P260 1216 aa6.34□□□□□ -1.39
ZNF561-216ENST00000483768 RABGEF1Q9UJ41 708 aa6.34□□□□□ -1.39
ZNF561-216ENST00000483768 MAP3K7O43318 606 aa6.33□□□□□ -1.4
ZNF561-216ENST00000483768 SPDYE16A6NNV3 312 aaPredicted RBP6.32□□□□□ -1.4
ZNF561-216ENST00000483768 PDIA6Q15084 440 aa6.32□□□□□ -1.4
ZNF561-216ENST00000483768 ANKK1Q8NFD2 765 aa6.32□□□□□ -1.4
ZNF561-216ENST00000483768 DAXXQ9UER7 740 aaPredicted RBP6.32□□□□□ -1.4
ZNF561-216ENST00000483768 GRXCR2A6NFK2 248 aa6.31□□□□□ -1.4
ZNF561-216ENST00000483768 VSIG10Q8N0Z9 540 aa6.31□□□□□ -1.4
ZNF561-216ENST00000483768 SEPT9Q9UHD8 586 aaPredicted RBP6.31□□□□□ -1.4
ZNF561-216ENST00000483768 BCAMP50895 628 aa6.3□□□□□ -1.4
ZNF561-216ENST00000483768 EN1Q05925 392 aaPredicted RBP6.3□□□□□ -1.4
ZNF561-216ENST00000483768 TSR1Q2NL82 804 aaKnown RBP6.3□□□□□ -1.4
ZNF561-216ENST00000483768 TIMELESSQ9UNS1 1208 aa6.3□□□□□ -1.4
ZNF561-216ENST00000483768 TRIM6-TRIM34B2RNG4 842 aa6.29□□□□□ -1.4
ZNF561-216ENST00000483768 LAPTM4BQ86VI4 370 aa6.28□□□□□ -1.4
ZNF561-216ENST00000483768 ZFRQ96KR1 1074 aaKnown RBP6.28□□□□□ -1.4
ZNF561-216ENST00000483768 TSHZ2Q9NRE2 1034 aa6.28□□□□□ -1.4
ZNF561-216ENST00000483768 PACS2Q86VP3 889 aa6.27□□□□□ -1.41
ZNF561-216ENST00000483768 NISCHQ9Y2I1 1504 aa6.26□□□□□ -1.41
ZNF561-216ENST00000483768 TULP1O00294 542 aaPredicted RBP6.26□□□□□ -1.41
ZNF561-216ENST00000483768 ONECUT3O60422 494 aaPredicted RBP6.26□□□□□ -1.41
ZNF561-216ENST00000483768 PRIM1P49642 420 aaKnown RBP6.26□□□□□ -1.41
ZNF561-216ENST00000483768 TSKSQ9UJT2 592 aa6.26□□□□□ -1.41
ZNF561-216ENST00000483768 SOWAHBA6NEL2 793 aa6.25□□□□□ -1.41
ZNF561-216ENST00000483768 FAM98CQ17RN3 349 aaKnown RBP6.25□□□□□ -1.41
ZNF561-216ENST00000483768 ARIH1Q9Y4X5 557 aaPredicted RBP6.25□□□□□ -1.41
ZNF561-216ENST00000483768 SMAPO00193 183 aa6.24□□□□□ -1.41
ZNF561-216ENST00000483768 CDCA7LQ96GN5 454 aa6.24□□□□□ -1.41
ZNF561-216ENST00000483768 LRCH3Q96II8 777 aa6.24□□□□□ -1.41
ZNF561-216ENST00000483768 WBP1LQ9NX94 342 aa6.24□□□□□ -1.41
ZNF561-216ENST00000483768 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.24□□□□□ -1.41
ZNF561-216ENST00000483768 PRSS12P56730 875 aa6.23□□□□□ -1.41
ZNF561-216ENST00000483768 CDHR5Q9HBB8 845 aa6.23□□□□□ -1.41
ZNF561-216ENST00000483768 HPS5Q9UPZ3 1129 aa6.23□□□□□ -1.41
ZNF561-216ENST00000483768 KDM2AQ9Y2K7 1162 aa6.23□□□□□ -1.41
ZNF561-216ENST00000483768 OSBPP22059 807 aa6.22□□□□□ -1.41
ZNF561-216ENST00000483768 CERKQ8TCT0 537 aa6.21□□□□□ -1.42
ZNF561-216ENST00000483768 FAM198AQ9UFP1 575 aa6.21□□□□□ -1.42
ZNF561-216ENST00000483768 TSR3Q9UJK0 312 aaKnown RBP6.21□□□□□ -1.42
ZNF561-216ENST00000483768 PNMA3Q9UL41 463 aa6.21□□□□□ -1.42
ZNF561-216ENST00000483768 NBPF26B4DH59 902 aa6.2□□□□□ -1.42
ZNF561-216ENST00000483768 TATDN2Q93075 761 aa6.2□□□□□ -1.42
ZNF561-216ENST00000483768 ARXQ96QS3 562 aa6.2□□□□□ -1.42
ZNF561-216ENST00000483768 A0A0G2JS52 829 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 C3orf80F5H4A9 247 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 RNF40O75150 1001 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 PPP4CP60510 307 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 IFFO2Q5TF58 517 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 NYAP1Q6ZVC0 841 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 SAMD7Q7Z3H4 446 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 KCNV2Q8TDN2 545 aa6.19□□□□□ -1.42
ZNF561-216ENST00000483768 MLLT3P42568 568 aaPredicted RBP6.18□□□□□ -1.42
ZNF561-216ENST00000483768 NUDT18Q6ZVK8 323 aa6.18□□□□□ -1.42
ZNF561-216ENST00000483768 ARHGEF1Q92888 912 aaKnown RBP6.18□□□□□ -1.42
ZNF561-216ENST00000483768 ITGBL1O95965 494 aaPredicted RBP6.17□□□□□ -1.42
ZNF561-216ENST00000483768 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
ZNF561-216ENST00000483768 KCNC4Q03721 635 aa6.17□□□□□ -1.42
ZNF561-216ENST00000483768 PADI6Q6TGC4 694 aa6.17□□□□□ -1.42
ZNF561-216ENST00000483768 NPDC1Q9NQX5 325 aaPredicted RBP6.15□□□□□ -1.42
ZNF561-216ENST00000483768 GTF3C3Q9Y5Q9 886 aa6.15□□□□□ -1.42
ZNF561-216ENST00000483768 RGS20O76081 388 aa6.14□□□□□ -1.43
ZNF561-216ENST00000483768 ABCC9O60706 1549 aa6.14□□□□□ -1.43
ZNF561-216ENST00000483768 NUTM2FA1L443 756 aa6.13□□□□□ -1.43
ZNF561-216ENST00000483768 RBM27Q9P2N5 1060 aaKnown RBP6.13□□□□□ -1.43
ZNF561-216ENST00000483768 SWT1Q5T5J6 900 aaKnown RBP6.12□□□□□ -1.43
ZNF561-216ENST00000483768 P3H3Q8IVL6 736 aa6.12□□□□□ -1.43
ZNF561-216ENST00000483768 IRX2Q9BZI1 471 aaPredicted RBP6.12□□□□□ -1.43
ZNF561-216ENST00000483768 TTC13Q8NBP0 860 aa6.11□□□□□ -1.43
ZNF561-216ENST00000483768 SEMA3EO15041 775 aa6.1□□□□□ -1.43
ZNF561-216ENST00000483768 SLC4A3P48751 1232 aa6.1□□□□□ -1.43
ZNF561-216ENST00000483768 APLP1P51693 650 aa6.1□□□□□ -1.43
ZNF561-216ENST00000483768 MTRQ99707 1265 aa6.1□□□□□ -1.43
ZNF561-216ENST00000483768 PTGDRQ13258 359 aa6.09□□□□□ -1.43
ZNF561-216ENST00000483768 TJAP1Q5JTD0 557 aa6.09□□□□□ -1.43
ZNF561-216ENST00000483768 SLF2Q8IX21 1173 aa6.09□□□□□ -1.43
ZNF561-216ENST00000483768 IL21Q9HBE4 155 aa6.09□□□□□ -1.43
ZNF561-216ENST00000483768 FAM161AQ3B820 660 aa6.08□□□□□ -1.44
ZNF561-216ENST00000483768 HOMEZQ8IX15 550 aa6.08□□□□□ -1.44
ZNF561-216ENST00000483768 ZNF516Q92618 1163 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms