RNA–Protein interactions for RNA: ENST00000481761.1

UBP1-209, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-209ENST00000481761 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
UBP1-209ENST00000481761 UGGT1Q9NYU2 1555 aa13.02□□□□□ -0.33
UBP1-209ENST00000481761 PZPP20742 1482 aa13.01□□□□□ -0.33
UBP1-209ENST00000481761 TNRQ92752 1358 aa13□□□□□ -0.33
UBP1-209ENST00000481761 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
UBP1-209ENST00000481761 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
UBP1-209ENST00000481761 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
UBP1-209ENST00000481761 PHLPP1O60346 1717 aa12.97□□□□□ -0.33
UBP1-209ENST00000481761 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
UBP1-209ENST00000481761 FAM135AQ9P2D6 1515 aa12.97□□□□□ -0.33
UBP1-209ENST00000481761 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.33
UBP1-209ENST00000481761 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
UBP1-209ENST00000481761 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
UBP1-209ENST00000481761 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.34
UBP1-209ENST00000481761 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
UBP1-209ENST00000481761 GGT6Q6P531 493 aa12.95□□□□□ -0.34
UBP1-209ENST00000481761 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
UBP1-209ENST00000481761 LRP6O75581 1613 aa12.95□□□□□ -0.34
UBP1-209ENST00000481761 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
UBP1-209ENST00000481761 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
UBP1-209ENST00000481761 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
UBP1-209ENST00000481761 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
UBP1-209ENST00000481761 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
UBP1-209ENST00000481761 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
UBP1-209ENST00000481761 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
UBP1-209ENST00000481761 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
UBP1-209ENST00000481761 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
UBP1-209ENST00000481761 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
UBP1-209ENST00000481761 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
UBP1-209ENST00000481761 TIAM1Q13009 1591 aa12.87□□□□□ -0.35
UBP1-209ENST00000481761 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
UBP1-209ENST00000481761 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBP1-209ENST00000481761 LRRC9Q6ZRR7 1453 aa12.86□□□□□ -0.35
UBP1-209ENST00000481761 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
UBP1-209ENST00000481761 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
UBP1-209ENST00000481761 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
UBP1-209ENST00000481761 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
UBP1-209ENST00000481761 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
UBP1-209ENST00000481761 SLIT1O75093 1534 aa12.85□□□□□ -0.35
UBP1-209ENST00000481761 EEA1Q15075 1411 aa12.85□□□□□ -0.35
UBP1-209ENST00000481761 JCADQ9P266 1359 aa12.84□□□□□ -0.35
UBP1-209ENST00000481761 TRIM52Q96A61 297 aa12.84□□□□□ -0.35
UBP1-209ENST00000481761 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
UBP1-209ENST00000481761 CEP152O94986 1710 aa12.83□□□□□ -0.36
UBP1-209ENST00000481761 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
UBP1-209ENST00000481761 MBD5Q9P267 1494 aa12.83□□□□□ -0.36
UBP1-209ENST00000481761 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
UBP1-209ENST00000481761 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
UBP1-209ENST00000481761 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
UBP1-209ENST00000481761 KDM5AP29375 1690 aaKnown RBP12.81□□□□□ -0.36
UBP1-209ENST00000481761 ABCC3O15438 1527 aa12.81□□□□□ -0.36
UBP1-209ENST00000481761 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
UBP1-209ENST00000481761 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
UBP1-209ENST00000481761 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
UBP1-209ENST00000481761 EP400Q96L91 3159 aa12.8□□□□□ -0.36
UBP1-209ENST00000481761 RGS12O14924 1447 aa12.79□□□□□ -0.36
UBP1-209ENST00000481761 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
UBP1-209ENST00000481761 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
UBP1-209ENST00000481761 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
UBP1-209ENST00000481761 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
UBP1-209ENST00000481761 AHDC1Q5TGY3 1603 aaPredicted RBP12.78□□□□□ -0.36
UBP1-209ENST00000481761 PIK3C2BO00750 1634 aa12.77□□□□□ -0.36
UBP1-209ENST00000481761 LTKP29376 864 aa12.77□□□□□ -0.37
UBP1-209ENST00000481761 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
UBP1-209ENST00000481761 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
UBP1-209ENST00000481761 TET3O43151 1660 aa12.77□□□□□ -0.37
UBP1-209ENST00000481761 CHD2O14647 1828 aaKnown RBP12.75□□□□□ -0.37
UBP1-209ENST00000481761 KIF3BO15066 747 aa12.75□□□□□ -0.37
UBP1-209ENST00000481761 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
UBP1-209ENST00000481761 LRP5O75197 1615 aa12.74□□□□□ -0.37
UBP1-209ENST00000481761 FYCO1Q9BQS8 1478 aa12.74□□□□□ -0.37
UBP1-209ENST00000481761 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
UBP1-209ENST00000481761 RXRBP28702 533 aa12.73□□□□□ -0.37
UBP1-209ENST00000481761 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
UBP1-209ENST00000481761 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
UBP1-209ENST00000481761 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
UBP1-209ENST00000481761 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
UBP1-209ENST00000481761 MAST1Q9Y2H9 1570 aa12.71□□□□□ -0.37
UBP1-209ENST00000481761 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
UBP1-209ENST00000481761 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
UBP1-209ENST00000481761 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
UBP1-209ENST00000481761 KCNA6P17658 529 aa12.68□□□□□ -0.38
UBP1-209ENST00000481761 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
UBP1-209ENST00000481761 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
UBP1-209ENST00000481761 MSH6P52701 1360 aa12.68□□□□□ -0.38
UBP1-209ENST00000481761 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
UBP1-209ENST00000481761 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
UBP1-209ENST00000481761 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
UBP1-209ENST00000481761 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
UBP1-209ENST00000481761 AFF2P51816 1311 aa12.65□□□□□ -0.38
UBP1-209ENST00000481761 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
UBP1-209ENST00000481761 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.38
UBP1-209ENST00000481761 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
UBP1-209ENST00000481761 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
UBP1-209ENST00000481761 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
UBP1-209ENST00000481761 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
UBP1-209ENST00000481761 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
UBP1-209ENST00000481761 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
UBP1-209ENST00000481761 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
UBP1-209ENST00000481761 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms