RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 CGNL1Q0VF96 1302 aa14.61□□□□□ -0.07
DDX39B-219ENST00000481456 E9PSI1 815 aa14.6□□□□□ -0.07
DDX39B-219ENST00000481456 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
DDX39B-219ENST00000481456 MFAP1P55081 439 aaKnown RBP14.6□□□□□ -0.07
DDX39B-219ENST00000481456 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
DDX39B-219ENST00000481456 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
DDX39B-219ENST00000481456 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
DDX39B-219ENST00000481456 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.07
DDX39B-219ENST00000481456 DNTTIP2Q5QJE6 756 aaKnown RBP14.58□□□□□ -0.07
DDX39B-219ENST00000481456 BRPF3Q9ULD4 1205 aa14.58□□□□□ -0.07
DDX39B-219ENST00000481456 KANK1Q14678 1352 aa14.58□□□□□ -0.08
DDX39B-219ENST00000481456 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
DDX39B-219ENST00000481456 DDX11L8A8MPP1 907 aa14.58□□□□□ -0.08
DDX39B-219ENST00000481456 ZNF644Q9H582 1327 aaPredicted RBP14.58□□□□□ -0.08
DDX39B-219ENST00000481456 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
DDX39B-219ENST00000481456 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
DDX39B-219ENST00000481456 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
DDX39B-219ENST00000481456 IPO8O15397 1037 aaKnown RBP14.56□□□□□ -0.08
DDX39B-219ENST00000481456 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
DDX39B-219ENST00000481456 KIAA1107Q9UPP5 1409 aa14.55□□□□□ -0.08
DDX39B-219ENST00000481456 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
DDX39B-219ENST00000481456 NGEFQ8N5V2 710 aa14.54□□□□□ -0.08
DDX39B-219ENST00000481456 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
DDX39B-219ENST00000481456 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
DDX39B-219ENST00000481456 HECW1Q76N89 1606 aa14.53□□□□□ -0.08
DDX39B-219ENST00000481456 WASHC2CQ9Y4E1 1318 aa14.53□□□□□ -0.08
DDX39B-219ENST00000481456 PRKCSHP14314 528 aaPredicted RBP14.52□□□□□ -0.08
DDX39B-219ENST00000481456 CLUAP1Q96AJ1 413 aa14.52□□□□□ -0.09
DDX39B-219ENST00000481456 COG6Q9Y2V7 657 aa14.52□□□□□ -0.09
DDX39B-219ENST00000481456 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.09
DDX39B-219ENST00000481456 DAPK1P53355 1430 aa14.52□□□□□ -0.09
DDX39B-219ENST00000481456 ROCK1Q13464 1354 aa14.51□□□□□ -0.09
DDX39B-219ENST00000481456 ANKRD30BQ9BXX2 1392 aa14.51□□□□□ -0.09
DDX39B-219ENST00000481456 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
DDX39B-219ENST00000481456 APAF1O14727 1248 aa14.51□□□□□ -0.09
DDX39B-219ENST00000481456 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
DDX39B-219ENST00000481456 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.092e-14■□□□□ 9
DDX39B-219ENST00000481456 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
DDX39B-219ENST00000481456 ADAMTS8Q9UP79 889 aa14.49□□□□□ -0.09
DDX39B-219ENST00000481456 CHMP5Q9NZZ3 219 aa14.48□□□□□ -0.09
DDX39B-219ENST00000481456 AAMPQ13685 434 aa14.48□□□□□ -0.09
DDX39B-219ENST00000481456 SKOR2Q2VWA4 1001 aaPredicted RBP14.48□□□□□ -0.09
DDX39B-219ENST00000481456 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
DDX39B-219ENST00000481456 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
DDX39B-219ENST00000481456 CUL7Q14999 1698 aa14.46□□□□□ -0.09
DDX39B-219ENST00000481456 RPRD2Q5VT52 1461 aaKnown RBP14.46□□□□□ -0.09
DDX39B-219ENST00000481456 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
DDX39B-219ENST00000481456 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 TOPBP1Q92547 1522 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 ABCA10Q8WWZ4 1543 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
DDX39B-219ENST00000481456 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
DDX39B-219ENST00000481456 POGKQ9P215 609 aa14.43□□□□□ -0.1
DDX39B-219ENST00000481456 PTPRKQ15262 1439 aa14.43□□□□□ -0.1
DDX39B-219ENST00000481456 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
DDX39B-219ENST00000481456 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
DDX39B-219ENST00000481456 BCL2L13Q9BXK5 485 aa14.43□□□□□ -0.1
DDX39B-219ENST00000481456 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-219ENST00000481456 EPRSP07814 1512 aaKnown RBP14.42□□□□□ -0.1
DDX39B-219ENST00000481456 MCCP23508 829 aa14.42□□□□□ -0.1
DDX39B-219ENST00000481456 EFCAB2Q5VUJ9 269 aa14.42□□□□□ -0.1
DDX39B-219ENST00000481456 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
DDX39B-219ENST00000481456 MRE11P49959 708 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
DDX39B-219ENST00000481456 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 CHAF1AQ13111 956 aaPredicted RBP14.41□□□□□ -0.1
DDX39B-219ENST00000481456 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 PLEKHH2Q8IVE3 1493 aa14.41□□□□□ -0.1
DDX39B-219ENST00000481456 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.1
DDX39B-219ENST00000481456 PANK1Q8TE04 598 aa14.4□□□□□ -0.1
DDX39B-219ENST00000481456 PDE3AQ14432 1141 aa14.39□□□□□ -0.11
DDX39B-219ENST00000481456 C22orf23Q9BZE7 217 aa14.39□□□□□ -0.11
DDX39B-219ENST00000481456 HAP1P54257 671 aaPredicted RBP14.39□□□□□ -0.11
DDX39B-219ENST00000481456 NINLQ9Y2I6 1382 aa14.39□□□□□ -0.11
DDX39B-219ENST00000481456 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
DDX39B-219ENST00000481456 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
DDX39B-219ENST00000481456 CDK13Q14004 1512 aaKnown RBP14.38□□□□□ -0.11
DDX39B-219ENST00000481456 KIAA2012Q0VF49 1180 aa14.38□□□□□ -0.11
DDX39B-219ENST00000481456 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
DDX39B-219ENST00000481456 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
DDX39B-219ENST00000481456 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
DDX39B-219ENST00000481456 ABCC5O15440 1437 aa14.37□□□□□ -0.11
DDX39B-219ENST00000481456 STAC3Q96MF2 364 aa14.37□□□□□ -0.11
DDX39B-219ENST00000481456 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
DDX39B-219ENST00000481456 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
DDX39B-219ENST00000481456 C9orf84Q5VXU9 1444 aa14.36□□□□□ -0.11
DDX39B-219ENST00000481456 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
DDX39B-219ENST00000481456 TRAK2O60296 914 aa14.35□□□□□ -0.11
DDX39B-219ENST00000481456 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-219ENST00000481456 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-219ENST00000481456 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
DDX39B-219ENST00000481456 ST18O60284 1047 aa14.34□□□□□ -0.11
DDX39B-219ENST00000481456 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX39B-219ENST00000481456 BCAR3O75815 825 aa14.34□□□□□ -0.11
DDX39B-219ENST00000481456 UGGT2Q9NYU1 1516 aa14.33□□□□□ -0.11
DDX39B-219ENST00000481456 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 755.5 ms