RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 C3P01024 1663 aa23.09■■□□□ 1.29
COL16A1-211ENST00000479100 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
COL16A1-211ENST00000479100 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
COL16A1-211ENST00000479100 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
COL16A1-211ENST00000479100 NPATQ14207 1427 aa23.06■■□□□ 1.28
COL16A1-211ENST00000479100 KIF3BO15066 747 aa23.04■■□□□ 1.28
COL16A1-211ENST00000479100 GGT6Q6P531 493 aa23.04■■□□□ 1.28
COL16A1-211ENST00000479100 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
COL16A1-211ENST00000479100 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
COL16A1-211ENST00000479100 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
COL16A1-211ENST00000479100 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
COL16A1-211ENST00000479100 ADGRL2O95490 1459 aa23.02■■□□□ 1.28
COL16A1-211ENST00000479100 DUOX2Q9NRD8 1548 aa23.01■■□□□ 1.27
COL16A1-211ENST00000479100 STRCQ7RTU9 1775 aa23■■□□□ 1.27
COL16A1-211ENST00000479100 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
COL16A1-211ENST00000479100 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
COL16A1-211ENST00000479100 PTPRTO14522 1441 aa22.97■■□□□ 1.27
COL16A1-211ENST00000479100 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
COL16A1-211ENST00000479100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL16A1-211ENST00000479100 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
COL16A1-211ENST00000479100 CLTCQ00610 1675 aaKnown RBP22.91■■□□□ 1.26
COL16A1-211ENST00000479100 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
COL16A1-211ENST00000479100 WASHC2CQ9Y4E1 1318 aa22.87■■□□□ 1.25
COL16A1-211ENST00000479100 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
COL16A1-211ENST00000479100 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
COL16A1-211ENST00000479100 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
COL16A1-211ENST00000479100 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
COL16A1-211ENST00000479100 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
COL16A1-211ENST00000479100 NAIPQ13075 1403 aa22.83■■□□□ 1.25
COL16A1-211ENST00000479100 FAM135AQ9P2D6 1515 aa22.83■■□□□ 1.25
COL16A1-211ENST00000479100 KANK1Q14678 1352 aa22.83■■□□□ 1.25
COL16A1-211ENST00000479100 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
COL16A1-211ENST00000479100 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
COL16A1-211ENST00000479100 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
COL16A1-211ENST00000479100 PZPP20742 1482 aa22.81■■□□□ 1.24
COL16A1-211ENST00000479100 PKD2Q13563 968 aa22.81■■□□□ 1.24
COL16A1-211ENST00000479100 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
COL16A1-211ENST00000479100 HFM1A2PYH4 1435 aa22.81■■□□□ 1.24
COL16A1-211ENST00000479100 MROH1Q8NDA8 1641 aa22.79■■□□□ 1.24
COL16A1-211ENST00000479100 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
COL16A1-211ENST00000479100 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
COL16A1-211ENST00000479100 TNRQ92752 1358 aa22.78■■□□□ 1.24
COL16A1-211ENST00000479100 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
COL16A1-211ENST00000479100 PRDM15P57071 1507 aaPredicted RBP22.77■■□□□ 1.24
COL16A1-211ENST00000479100 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
COL16A1-211ENST00000479100 ABCC3O15438 1527 aa22.76■■□□□ 1.23
COL16A1-211ENST00000479100 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
COL16A1-211ENST00000479100 NUP155O75694 1391 aa22.74■■□□□ 1.23
COL16A1-211ENST00000479100 CEP152O94986 1710 aa22.73■■□□□ 1.23
COL16A1-211ENST00000479100 ZNF335Q9H4Z2 1342 aaPredicted RBP22.72■■□□□ 1.23
COL16A1-211ENST00000479100 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
COL16A1-211ENST00000479100 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
COL16A1-211ENST00000479100 UNC13BO14795 1591 aa22.71■■□□□ 1.23
COL16A1-211ENST00000479100 ZC3H13Q5T200 1668 aaKnown RBP22.71■■□□□ 1.23
COL16A1-211ENST00000479100 IQSEC2Q5JU85 1478 aa22.7■■□□□ 1.22
COL16A1-211ENST00000479100 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
COL16A1-211ENST00000479100 NLRP1Q9C000 1473 aa22.67■■□□□ 1.22
COL16A1-211ENST00000479100 LMTK2Q8IWU2 1503 aa22.65■■□□□ 1.22
COL16A1-211ENST00000479100 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
COL16A1-211ENST00000479100 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
COL16A1-211ENST00000479100 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
COL16A1-211ENST00000479100 IQGAP3Q86VI3 1631 aa22.62■■□□□ 1.21
COL16A1-211ENST00000479100 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
COL16A1-211ENST00000479100 NEURL4Q96JN8 1562 aa22.62■■□□□ 1.21
COL16A1-211ENST00000479100 ERVK-7P63135 1459 aa22.61■■□□□ 1.21
COL16A1-211ENST00000479100 ARHGAP31Q2M1Z3 1444 aa22.61■■□□□ 1.21
COL16A1-211ENST00000479100 CFAP65Q6ZU64 1925 aaKnown RBP22.6■■□□□ 1.21
COL16A1-211ENST00000479100 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
COL16A1-211ENST00000479100 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
COL16A1-211ENST00000479100 TET3O43151 1660 aa22.59■■□□□ 1.21
COL16A1-211ENST00000479100 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
COL16A1-211ENST00000479100 MED14O60244 1454 aa22.57■■□□□ 1.2
COL16A1-211ENST00000479100 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
COL16A1-211ENST00000479100 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
COL16A1-211ENST00000479100 RPRD2Q5VT52 1461 aaKnown RBP22.53■■□□□ 1.2
COL16A1-211ENST00000479100 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
COL16A1-211ENST00000479100 E9PCH4 1651 aa22.52■■□□□ 1.2
COL16A1-211ENST00000479100 UBAP1LF5GYI3 381 aa22.51■■□□□ 1.19
COL16A1-211ENST00000479100 HRCP23327 699 aa22.51■■□□□ 1.19
COL16A1-211ENST00000479100 NOS1P29475 1434 aa22.48■■□□□ 1.19
COL16A1-211ENST00000479100 POLR1AO95602 1720 aaPredicted RBP22.48■■□□□ 1.19
COL16A1-211ENST00000479100 FOXD1Q16676 465 aa22.48■■□□□ 1.19
COL16A1-211ENST00000479100 CPS1P31327 1500 aa22.47■■□□□ 1.19
COL16A1-211ENST00000479100 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
COL16A1-211ENST00000479100 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
COL16A1-211ENST00000479100 ARHGAP23Q9P227 1491 aa22.46■■□□□ 1.19
COL16A1-211ENST00000479100 LTKP29376 864 aa22.45■■□□□ 1.18
COL16A1-211ENST00000479100 IDI1Q13907 227 aa22.45■■□□□ 1.18
COL16A1-211ENST00000479100 SYNMO15061 1565 aa22.45■■□□□ 1.18
COL16A1-211ENST00000479100 SLC52A1Q9NWF4 448 aa22.44■■□□□ 1.18
COL16A1-211ENST00000479100 SLIT1O75093 1534 aa22.42■■□□□ 1.18
COL16A1-211ENST00000479100 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
COL16A1-211ENST00000479100 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
COL16A1-211ENST00000479100 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
COL16A1-211ENST00000479100 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
COL16A1-211ENST00000479100 IQGAP1P46940 1657 aa22.39■■□□□ 1.17
COL16A1-211ENST00000479100 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
COL16A1-211ENST00000479100 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
COL16A1-211ENST00000479100 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
COL16A1-211ENST00000479100 TOM1O60784 492 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms