RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 KIF3BO15066 747 aa17.02■□□□□ 0.32
TNRC6A-206ENST00000477487 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.31
TNRC6A-206ENST00000477487 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
TNRC6A-206ENST00000477487 UNC13BO14795 1591 aa17.01■□□□□ 0.31
TNRC6A-206ENST00000477487 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
TNRC6A-206ENST00000477487 RTEL1-TNFRSF6BF6WH68 1400 aa17.01■□□□□ 0.31
TNRC6A-206ENST00000477487 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
TNRC6A-206ENST00000477487 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
TNRC6A-206ENST00000477487 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
TNRC6A-206ENST00000477487 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
TNRC6A-206ENST00000477487 KIF13AQ9H1H9 1805 aa16.99■□□□□ 0.31
TNRC6A-206ENST00000477487 GLI2P10070 1586 aa16.98■□□□□ 0.31
TNRC6A-206ENST00000477487 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
TNRC6A-206ENST00000477487 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
TNRC6A-206ENST00000477487 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
TNRC6A-206ENST00000477487 KDM5CP41229 1560 aa16.97■□□□□ 0.31
TNRC6A-206ENST00000477487 ABCA6Q8N139 1617 aa16.96■□□□□ 0.31
TNRC6A-206ENST00000477487 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.3
TNRC6A-206ENST00000477487 NEO1Q92859 1461 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 CFAP74Q9C0B2 1584 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 IQGAP3Q86VI3 1631 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
TNRC6A-206ENST00000477487 MAGI2Q86UL8 1455 aa16.94■□□□□ 0.3
TNRC6A-206ENST00000477487 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
TNRC6A-206ENST00000477487 GGT6Q6P531 493 aa16.93■□□□□ 0.3
TNRC6A-206ENST00000477487 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
TNRC6A-206ENST00000477487 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
TNRC6A-206ENST00000477487 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
TNRC6A-206ENST00000477487 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
TNRC6A-206ENST00000477487 A2MP01023 1474 aa16.92■□□□□ 0.3
TNRC6A-206ENST00000477487 E9PCH4 1651 aa16.91■□□□□ 0.3
TNRC6A-206ENST00000477487 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
TNRC6A-206ENST00000477487 CFAP65Q6ZU64 1925 aaKnown RBP16.91■□□□□ 0.3
TNRC6A-206ENST00000477487 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
TNRC6A-206ENST00000477487 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.29
TNRC6A-206ENST00000477487 ACIN1Q9UKV3 1341 aaKnown RBP16.87■□□□□ 0.29
TNRC6A-206ENST00000477487 CEP152O94986 1710 aa16.86■□□□□ 0.29
TNRC6A-206ENST00000477487 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
TNRC6A-206ENST00000477487 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
TNRC6A-206ENST00000477487 MIER1Q8N108 512 aa16.85■□□□□ 0.29
TNRC6A-206ENST00000477487 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
TNRC6A-206ENST00000477487 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
TNRC6A-206ENST00000477487 ATP10AO60312 1499 aa16.84■□□□□ 0.29
TNRC6A-206ENST00000477487 VWDEQ8N2E2 1590 aa16.84■□□□□ 0.29
TNRC6A-206ENST00000477487 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.29
TNRC6A-206ENST00000477487 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.28
TNRC6A-206ENST00000477487 EIF2AK4Q9P2K8 1649 aaKnown RBP16.82■□□□□ 0.28
TNRC6A-206ENST00000477487 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
TNRC6A-206ENST00000477487 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
TNRC6A-206ENST00000477487 TET3O43151 1660 aa16.8■□□□□ 0.28
TNRC6A-206ENST00000477487 KANK1Q14678 1352 aa16.79■□□□□ 0.28
TNRC6A-206ENST00000477487 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
TNRC6A-206ENST00000477487 MLECQ14165 292 aa16.79■□□□□ 0.28
TNRC6A-206ENST00000477487 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
TNRC6A-206ENST00000477487 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
TNRC6A-206ENST00000477487 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
TNRC6A-206ENST00000477487 SPHKAPQ2M3C7 1700 aa16.77■□□□□ 0.28
TNRC6A-206ENST00000477487 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
TNRC6A-206ENST00000477487 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
TNRC6A-206ENST00000477487 NPATQ14207 1427 aa16.75■□□□□ 0.27
TNRC6A-206ENST00000477487 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
TNRC6A-206ENST00000477487 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
TNRC6A-206ENST00000477487 ABCC3O15438 1527 aa16.74■□□□□ 0.27
TNRC6A-206ENST00000477487 PTPRTO14522 1441 aa16.74■□□□□ 0.27
TNRC6A-206ENST00000477487 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
TNRC6A-206ENST00000477487 TRPM2O94759 1503 aa16.73■□□□□ 0.27
TNRC6A-206ENST00000477487 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
TNRC6A-206ENST00000477487 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNRC6A-206ENST00000477487 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
TNRC6A-206ENST00000477487 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
TNRC6A-206ENST00000477487 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
TNRC6A-206ENST00000477487 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
TNRC6A-206ENST00000477487 ARXQ96QS3 562 aa16.69■□□□□ 0.26
TNRC6A-206ENST00000477487 UHRF1BP1Q6BDS2 1440 aa16.69■□□□□ 0.26
TNRC6A-206ENST00000477487 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
TNRC6A-206ENST00000477487 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
TNRC6A-206ENST00000477487 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
TNRC6A-206ENST00000477487 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
TNRC6A-206ENST00000477487 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
TNRC6A-206ENST00000477487 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
TNRC6A-206ENST00000477487 USP47Q96K76 1375 aa16.66■□□□□ 0.26
TNRC6A-206ENST00000477487 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
TNRC6A-206ENST00000477487 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
TNRC6A-206ENST00000477487 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
TNRC6A-206ENST00000477487 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
TNRC6A-206ENST00000477487 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
TNRC6A-206ENST00000477487 SYNMO15061 1565 aa16.64■□□□□ 0.25
TNRC6A-206ENST00000477487 ARHGEF40Q8TER5 1519 aa16.63■□□□□ 0.25
TNRC6A-206ENST00000477487 ADGRF5Q8IZF2 1346 aa16.63■□□□□ 0.25
TNRC6A-206ENST00000477487 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
TNRC6A-206ENST00000477487 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
TNRC6A-206ENST00000477487 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
TNRC6A-206ENST00000477487 IDI1Q13907 227 aa16.61■□□□□ 0.25
TNRC6A-206ENST00000477487 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
TNRC6A-206ENST00000477487 KIF1BO60333 1816 aa16.6■□□□□ 0.25
TNRC6A-206ENST00000477487 NOS1P29475 1434 aa16.59■□□□□ 0.25
TNRC6A-206ENST00000477487 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms