RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 E2F4Q16254 413 aa10.16□□□□□ -0.78
RBM39-231ENST00000477334 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
RBM39-231ENST00000477334 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.78
RBM39-231ENST00000477334 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
RBM39-231ENST00000477334 NBR1Q14596 966 aa10.13□□□□□ -0.79
RBM39-231ENST00000477334 PDIA6Q15084 440 aa10.13□□□□□ -0.79
RBM39-231ENST00000477334 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
RBM39-231ENST00000477334 EPAS1Q99814 870 aa10.12□□□□□ -0.79
RBM39-231ENST00000477334 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
RBM39-231ENST00000477334 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
RBM39-231ENST00000477334 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
RBM39-231ENST00000477334 DDX12PQ92771 950 aa10.1□□□□□ -0.79
RBM39-231ENST00000477334 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
RBM39-231ENST00000477334 COL9A1P20849 921 aa10.08□□□□□ -0.8
RBM39-231ENST00000477334 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
RBM39-231ENST00000477334 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
RBM39-231ENST00000477334 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
RBM39-231ENST00000477334 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
RBM39-231ENST00000477334 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
RBM39-231ENST00000477334 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
RBM39-231ENST00000477334 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
RBM39-231ENST00000477334 RBM33Q96EV2 1170 aaKnown RBP10.04□□□□□ -0.8
RBM39-231ENST00000477334 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
RBM39-231ENST00000477334 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
RBM39-231ENST00000477334 GOLGA8CPA6NN73 597 aa10□□□□□ -0.81
RBM39-231ENST00000477334 MAP3K7O43318 606 aa10□□□□□ -0.81
RBM39-231ENST00000477334 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
RBM39-231ENST00000477334 GRXCR2A6NFK2 248 aa9.98□□□□□ -0.81
RBM39-231ENST00000477334 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
RBM39-231ENST00000477334 WNT2BQ93097 391 aa9.98□□□□□ -0.81
RBM39-231ENST00000477334 TRIM6-TRIM34B2RNG4 842 aa9.97□□□□□ -0.81
RBM39-231ENST00000477334 SEMA3EO15041 775 aa9.97□□□□□ -0.81
RBM39-231ENST00000477334 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
RBM39-231ENST00000477334 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
RBM39-231ENST00000477334 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
RBM39-231ENST00000477334 PTPN5P54829 565 aa9.95□□□□□ -0.82
RBM39-231ENST00000477334 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
RBM39-231ENST00000477334 OSBPP22059 807 aa9.94□□□□□ -0.82
RBM39-231ENST00000477334 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
RBM39-231ENST00000477334 ANKK1Q8NFD2 765 aa9.91□□□□□ -0.82
RBM39-231ENST00000477334 CERKQ8TCT0 537 aa9.91□□□□□ -0.82
RBM39-231ENST00000477334 SEPT9Q9UHD8 586 aaPredicted RBP9.91□□□□□ -0.82
RBM39-231ENST00000477334 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
RBM39-231ENST00000477334 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
RBM39-231ENST00000477334 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
RBM39-231ENST00000477334 FAM98CQ17RN3 349 aaKnown RBP9.89□□□□□ -0.83
RBM39-231ENST00000477334 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
RBM39-231ENST00000477334 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
RBM39-231ENST00000477334 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
RBM39-231ENST00000477334 PRSS12P56730 875 aa9.88□□□□□ -0.83
RBM39-231ENST00000477334 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
RBM39-231ENST00000477334 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
RBM39-231ENST00000477334 SOWAHBA6NEL2 793 aa9.87□□□□□ -0.83
RBM39-231ENST00000477334 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
RBM39-231ENST00000477334 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
RBM39-231ENST00000477334 BCAMP50895 628 aa9.86□□□□□ -0.83
RBM39-231ENST00000477334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
RBM39-231ENST00000477334 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
RBM39-231ENST00000477334 RBM27Q9P2N5 1060 aaKnown RBP9.85□□□□□ -0.83
RBM39-231ENST00000477334 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
RBM39-231ENST00000477334 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
RBM39-231ENST00000477334 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
RBM39-231ENST00000477334 LRCH3Q96II8 777 aa9.81□□□□□ -0.84
RBM39-231ENST00000477334 NPDC1Q9NQX5 325 aaPredicted RBP9.81□□□□□ -0.84
RBM39-231ENST00000477334 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.81□□□□□ -0.84
RBM39-231ENST00000477334 SMAPO00193 183 aa9.8□□□□□ -0.84
RBM39-231ENST00000477334 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
RBM39-231ENST00000477334 TATDN2Q93075 761 aa9.8□□□□□ -0.84
RBM39-231ENST00000477334 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
RBM39-231ENST00000477334 RBM26Q5T8P6 1007 aaKnown RBP9.79□□□□□ -0.84
RBM39-231ENST00000477334 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
RBM39-231ENST00000477334 WBP1LQ9NX94 342 aa9.79□□□□□ -0.84
RBM39-231ENST00000477334 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
RBM39-231ENST00000477334 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
RBM39-231ENST00000477334 TSR3Q9UJK0 312 aaKnown RBP9.78□□□□□ -0.84
RBM39-231ENST00000477334 PADI6Q6TGC4 694 aa9.77□□□□□ -0.85
RBM39-231ENST00000477334 NUDT18Q6ZVK8 323 aa9.77□□□□□ -0.85
RBM39-231ENST00000477334 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
RBM39-231ENST00000477334 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
RBM39-231ENST00000477334 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
RBM39-231ENST00000477334 PTGDRQ13258 359 aa9.73□□□□□ -0.85
RBM39-231ENST00000477334 PPP4CP60510 307 aa9.72□□□□□ -0.85
RBM39-231ENST00000477334 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
RBM39-231ENST00000477334 A0A0G2JS52 829 aa9.7□□□□□ -0.86
RBM39-231ENST00000477334 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
RBM39-231ENST00000477334 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
RBM39-231ENST00000477334 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
RBM39-231ENST00000477334 EYA1Q99502 592 aa9.68□□□□□ -0.86
RBM39-231ENST00000477334 RNF40O75150 1001 aa9.67□□□□□ -0.86
RBM39-231ENST00000477334 FCHSD2O94868 740 aa9.66□□□□□ -0.86
RBM39-231ENST00000477334 KCNC4Q03721 635 aa9.66□□□□□ -0.86
RBM39-231ENST00000477334 RGS20O76081 388 aa9.65□□□□□ -0.86
RBM39-231ENST00000477334 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
RBM39-231ENST00000477334 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
RBM39-231ENST00000477334 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
RBM39-231ENST00000477334 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
RBM39-231ENST00000477334 ZMYND10O75800 440 aa9.63□□□□□ -0.87
RBM39-231ENST00000477334 RBM46Q8TBY0 533 aaKnown RBP9.63□□□□□ -0.87
RBM39-231ENST00000477334 GPR37O15354 613 aa9.61□□□□□ -0.87
RBM39-231ENST00000477334 DNAJB2P25686 324 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms