RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
COPS3-207ENST00000477299 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
COPS3-207ENST00000477299 RNF17Q9BXT8 1623 aaKnown RBP23.97■■□□□ 1.43
COPS3-207ENST00000477299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
COPS3-207ENST00000477299 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.43
COPS3-207ENST00000477299 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
COPS3-207ENST00000477299 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
COPS3-207ENST00000477299 DEPDC5O75140 1603 aa23.93■■□□□ 1.42
COPS3-207ENST00000477299 CEP152O94986 1710 aa23.93■■□□□ 1.42
COPS3-207ENST00000477299 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
COPS3-207ENST00000477299 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
COPS3-207ENST00000477299 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
COPS3-207ENST00000477299 PTPRMP28827 1452 aa23.87■■□□□ 1.41
COPS3-207ENST00000477299 C3P01024 1663 aa23.87■■□□□ 1.41
COPS3-207ENST00000477299 UNC13BO14795 1591 aa23.86■■□□□ 1.41
COPS3-207ENST00000477299 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
COPS3-207ENST00000477299 PRDM15P57071 1507 aaPredicted RBP23.86■■□□□ 1.41
COPS3-207ENST00000477299 ABCC3O15438 1527 aa23.85■■□□□ 1.41
COPS3-207ENST00000477299 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
COPS3-207ENST00000477299 VWDEQ8N2E2 1590 aa23.84■■□□□ 1.41
COPS3-207ENST00000477299 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
COPS3-207ENST00000477299 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.41
COPS3-207ENST00000477299 ZMYM3Q14202 1370 aa23.82■■□□□ 1.4
COPS3-207ENST00000477299 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
COPS3-207ENST00000477299 MROH2AA6NES4 1674 aa23.82■■□□□ 1.4
COPS3-207ENST00000477299 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
COPS3-207ENST00000477299 NUP155O75694 1391 aa23.79■■□□□ 1.4
COPS3-207ENST00000477299 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
COPS3-207ENST00000477299 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
COPS3-207ENST00000477299 CNTLNQ9NXG0 1405 aa23.78■■□□□ 1.4
COPS3-207ENST00000477299 FBXO31Q5XUX0 539 aaPredicted RBP23.78■■□□□ 1.4
COPS3-207ENST00000477299 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
COPS3-207ENST00000477299 KANK1Q14678 1352 aa23.78■■□□□ 1.4
COPS3-207ENST00000477299 IQGAP3Q86VI3 1631 aa23.77■■□□□ 1.4
COPS3-207ENST00000477299 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
COPS3-207ENST00000477299 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
COPS3-207ENST00000477299 PZPP20742 1482 aa23.72■■□□□ 1.39
COPS3-207ENST00000477299 E9PCH4 1651 aa23.72■■□□□ 1.39
COPS3-207ENST00000477299 TET3O43151 1660 aa23.72■■□□□ 1.39
COPS3-207ENST00000477299 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
COPS3-207ENST00000477299 NPATQ14207 1427 aa23.69■■□□□ 1.38
COPS3-207ENST00000477299 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
COPS3-207ENST00000477299 SETD1BQ9UPS6 1966 aaKnown RBP23.68■■□□□ 1.38
COPS3-207ENST00000477299 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
COPS3-207ENST00000477299 ARHGAP31Q2M1Z3 1444 aa23.65■■□□□ 1.38
COPS3-207ENST00000477299 FOXD1Q16676 465 aa23.64■■□□□ 1.37
COPS3-207ENST00000477299 SLC4A1APQ9BWU0 796 aaKnown RBP23.63■■□□□ 1.37
COPS3-207ENST00000477299 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
COPS3-207ENST00000477299 PKD2Q13563 968 aa23.62■■□□□ 1.37
COPS3-207ENST00000477299 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
COPS3-207ENST00000477299 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
COPS3-207ENST00000477299 HRCP23327 699 aa23.59■■□□□ 1.37
COPS3-207ENST00000477299 TNRQ92752 1358 aa23.59■■□□□ 1.37
COPS3-207ENST00000477299 SYNMO15061 1565 aa23.59■■□□□ 1.37
COPS3-207ENST00000477299 MYO3AQ8NEV4 1616 aa23.57■■□□□ 1.36
COPS3-207ENST00000477299 NOS1P29475 1434 aa23.56■■□□□ 1.36
COPS3-207ENST00000477299 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
COPS3-207ENST00000477299 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
COPS3-207ENST00000477299 RPRD2Q5VT52 1461 aaKnown RBP23.55■■□□□ 1.36
COPS3-207ENST00000477299 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
COPS3-207ENST00000477299 LMTK3Q96Q04 1460 aa23.53■■□□□ 1.36
COPS3-207ENST00000477299 HSPA2P54652 639 aa23.52■■□□□ 1.36
COPS3-207ENST00000477299 IDI1Q13907 227 aa23.51■■□□□ 1.35
COPS3-207ENST00000477299 MYO5BQ9ULV0 1848 aa23.5■■□□□ 1.35
COPS3-207ENST00000477299 PIK3C2BO00750 1634 aa23.5■■□□□ 1.35
COPS3-207ENST00000477299 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
COPS3-207ENST00000477299 PTPRTO14522 1441 aa23.49■■□□□ 1.35
COPS3-207ENST00000477299 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
COPS3-207ENST00000477299 ZNF142P52746 1687 aaPredicted RBP23.48■■□□□ 1.35
COPS3-207ENST00000477299 A2ML1A8K2U0 1454 aa23.46■■□□□ 1.35
COPS3-207ENST00000477299 ACIN1Q9UKV3 1341 aaKnown RBP23.46■■□□□ 1.35
COPS3-207ENST00000477299 UBR1Q8IWV7 1749 aa23.45■■□□□ 1.34
COPS3-207ENST00000477299 CLTCL1P53675 1640 aa23.45■■□□□ 1.34
COPS3-207ENST00000477299 NLRP1Q9C000 1473 aa23.44■■□□□ 1.34
COPS3-207ENST00000477299 TRPM2O94759 1503 aa23.42■■□□□ 1.34
COPS3-207ENST00000477299 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
COPS3-207ENST00000477299 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
COPS3-207ENST00000477299 CHGAP10645 457 aaKnown RBP23.39■■□□□ 1.33
COPS3-207ENST00000477299 TMEM131LA2VDJ0 1609 aa23.39■■□□□ 1.33
COPS3-207ENST00000477299 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
COPS3-207ENST00000477299 KIF1BO60333 1816 aa23.38■■□□□ 1.33
COPS3-207ENST00000477299 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
COPS3-207ENST00000477299 ADGRB3O60242 1522 aa23.35■■□□□ 1.33
COPS3-207ENST00000477299 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
COPS3-207ENST00000477299 NCKAP5LQ9HCH0 1330 aa23.33■■□□□ 1.33
COPS3-207ENST00000477299 THEMISQ8N1K5 641 aaPredicted RBP23.33■■□□□ 1.33
COPS3-207ENST00000477299 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
COPS3-207ENST00000477299 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
COPS3-207ENST00000477299 LTKP29376 864 aa23.29■■□□□ 1.32
COPS3-207ENST00000477299 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
COPS3-207ENST00000477299 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
COPS3-207ENST00000477299 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
COPS3-207ENST00000477299 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
COPS3-207ENST00000477299 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
COPS3-207ENST00000477299 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.31
COPS3-207ENST00000477299 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
COPS3-207ENST00000477299 SLIT1O75093 1534 aa23.26■■□□□ 1.31
COPS3-207ENST00000477299 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
COPS3-207ENST00000477299 NEURL4Q96JN8 1562 aa23.24■■□□□ 1.31
COPS3-207ENST00000477299 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms