RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 PLEKHD1A6NEE1 506 aa11.62□□□□□ -0.55
RBM39-230ENST00000476806 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
RBM39-230ENST00000476806 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
RBM39-230ENST00000476806 MIER1Q8N108 512 aa11.61□□□□□ -0.55
RBM39-230ENST00000476806 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
RBM39-230ENST00000476806 PLB1Q6P1J6 1458 aa11.61□□□□□ -0.55
RBM39-230ENST00000476806 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
RBM39-230ENST00000476806 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
RBM39-230ENST00000476806 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
RBM39-230ENST00000476806 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
RBM39-230ENST00000476806 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
RBM39-230ENST00000476806 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
RBM39-230ENST00000476806 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
RBM39-230ENST00000476806 ABCC10Q5T3U5 1492 aa11.57□□□□□ -0.56
RBM39-230ENST00000476806 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
RBM39-230ENST00000476806 FAM50AQ14320 339 aaKnown RBP11.55□□□□□ -0.56
RBM39-230ENST00000476806 ATP10BO94823 1461 aa11.55□□□□□ -0.56
RBM39-230ENST00000476806 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
RBM39-230ENST00000476806 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
RBM39-230ENST00000476806 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
RBM39-230ENST00000476806 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
RBM39-230ENST00000476806 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
RBM39-230ENST00000476806 PLCG2P16885 1265 aa11.53□□□□□ -0.56
RBM39-230ENST00000476806 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
RBM39-230ENST00000476806 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
RBM39-230ENST00000476806 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
RBM39-230ENST00000476806 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
RBM39-230ENST00000476806 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
RBM39-230ENST00000476806 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
RBM39-230ENST00000476806 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
RBM39-230ENST00000476806 KDM6BO15054 1643 aa11.5□□□□□ -0.57
RBM39-230ENST00000476806 SHANK2Q9UPX8 1470 aa11.5□□□□□ -0.57
RBM39-230ENST00000476806 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
RBM39-230ENST00000476806 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
RBM39-230ENST00000476806 DIP2BQ9P265 1576 aa11.49□□□□□ -0.57
RBM39-230ENST00000476806 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
RBM39-230ENST00000476806 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
RBM39-230ENST00000476806 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
RBM39-230ENST00000476806 NUBP1P53384 320 aa11.48□□□□□ -0.57
RBM39-230ENST00000476806 ADGRL1O94910 1474 aa11.48□□□□□ -0.57
RBM39-230ENST00000476806 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
RBM39-230ENST00000476806 GCC2Q8IWJ2 1684 aa11.47□□□□□ -0.57
RBM39-230ENST00000476806 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
RBM39-230ENST00000476806 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.57
RBM39-230ENST00000476806 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 WDR7Q9Y4E6 1490 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 CDC42BPAQ5VT25 1732 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 ADGBQ8N7X0 1667 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
RBM39-230ENST00000476806 DAPK1P53355 1430 aa11.44□□□□□ -0.58
RBM39-230ENST00000476806 FKBP8Q14318 412 aa11.44□□□□□ -0.58
RBM39-230ENST00000476806 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
RBM39-230ENST00000476806 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
RBM39-230ENST00000476806 CFAP74Q9C0B2 1584 aa11.44□□□□□ -0.58
RBM39-230ENST00000476806 KIAA1107Q9UPP5 1409 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 SNPHO15079 494 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
RBM39-230ENST00000476806 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
RBM39-230ENST00000476806 ARHGAP5Q13017 1502 aa11.41□□□□□ -0.58
RBM39-230ENST00000476806 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
RBM39-230ENST00000476806 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
RBM39-230ENST00000476806 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
RBM39-230ENST00000476806 TIMELESSQ9UNS1 1208 aa11.41□□□□□ -0.58
RBM39-230ENST00000476806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
RBM39-230ENST00000476806 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.58
RBM39-230ENST00000476806 ARID3CA6NKF2 412 aa11.4□□□□□ -0.58
RBM39-230ENST00000476806 ITGAEP38570 1179 aa11.4□□□□□ -0.58
RBM39-230ENST00000476806 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
RBM39-230ENST00000476806 PLCH2O75038 1416 aa11.4□□□□□ -0.58
RBM39-230ENST00000476806 ABCA9Q8IUA7 1624 aa11.39□□□□□ -0.59
RBM39-230ENST00000476806 NAIPQ13075 1403 aa11.39□□□□□ -0.59
RBM39-230ENST00000476806 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
RBM39-230ENST00000476806 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
RBM39-230ENST00000476806 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
RBM39-230ENST00000476806 TSPOAP1O95153 1857 aa11.38□□□□□ -0.59
RBM39-230ENST00000476806 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
RBM39-230ENST00000476806 FAM212AQ96EL1 285 aa11.38□□□□□ -0.59
RBM39-230ENST00000476806 ABCC5O15440 1437 aa11.37□□□□□ -0.59
RBM39-230ENST00000476806 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
RBM39-230ENST00000476806 CDC42BPBQ9Y5S2 1711 aa11.36□□□□□ -0.59
RBM39-230ENST00000476806 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
RBM39-230ENST00000476806 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
RBM39-230ENST00000476806 ASXL2Q76L83 1435 aa11.35□□□□□ -0.59
RBM39-230ENST00000476806 PLXNC1O60486 1568 aa11.34□□□□□ -0.59
RBM39-230ENST00000476806 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
RBM39-230ENST00000476806 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
RBM39-230ENST00000476806 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.6
RBM39-230ENST00000476806 ABCC1P33527 1531 aa11.33□□□□□ -0.6
RBM39-230ENST00000476806 RTEL1-TNFRSF6BF6WH68 1400 aa11.33□□□□□ -0.6
RBM39-230ENST00000476806 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
RBM39-230ENST00000476806 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
RBM39-230ENST00000476806 FANCAO15360 1455 aa11.31□□□□□ -0.6
RBM39-230ENST00000476806 MBD5Q9P267 1494 aa11.31□□□□□ -0.6
RBM39-230ENST00000476806 PPRC1Q5VV67 1664 aaKnown RBP11.3□□□□□ -0.6
RBM39-230ENST00000476806 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
RBM39-230ENST00000476806 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms