RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 FOSBP53539 338 aa9.05□□□□□ -0.96
TRA2A-205ENST00000475970 PDIA6Q15084 440 aa9.05□□□□□ -0.96
TRA2A-205ENST00000475970 JPH4Q96JJ6 628 aa9.05□□□□□ -0.96
TRA2A-205ENST00000475970 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
TRA2A-205ENST00000475970 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
TRA2A-205ENST00000475970 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
TRA2A-205ENST00000475970 ANO8Q9HCE9 1232 aaPredicted RBP9.03□□□□□ -0.96
TRA2A-205ENST00000475970 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
TRA2A-205ENST00000475970 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
TRA2A-205ENST00000475970 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
TRA2A-205ENST00000475970 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
TRA2A-205ENST00000475970 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
TRA2A-205ENST00000475970 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
TRA2A-205ENST00000475970 DDX12PQ92771 950 aa8.97□□□□□ -0.97
TRA2A-205ENST00000475970 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
TRA2A-205ENST00000475970 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
TRA2A-205ENST00000475970 PTPN5P54829 565 aa8.96□□□□□ -0.98
TRA2A-205ENST00000475970 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
TRA2A-205ENST00000475970 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.98
TRA2A-205ENST00000475970 FBXW7Q969H0 707 aa8.95□□□□□ -0.98
TRA2A-205ENST00000475970 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
TRA2A-205ENST00000475970 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
TRA2A-205ENST00000475970 WNT2BQ93097 391 aa8.94□□□□□ -0.98
TRA2A-205ENST00000475970 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
TRA2A-205ENST00000475970 PHF14O94880 888 aa8.93□□□□□ -0.98
TRA2A-205ENST00000475970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRA2A-205ENST00000475970 PCDHGA10Q9Y5H3 936 aa8.93□□□□□ -0.98
TRA2A-205ENST00000475970 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
TRA2A-205ENST00000475970 OSBPP22059 807 aa8.91□□□□□ -0.98
TRA2A-205ENST00000475970 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
TRA2A-205ENST00000475970 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.98
TRA2A-205ENST00000475970 RBM26Q5T8P6 1007 aaKnown RBP8.89□□□□□ -0.99
TRA2A-205ENST00000475970 EPAS1Q99814 870 aa8.89□□□□□ -0.99
TRA2A-205ENST00000475970 RABGEF1Q9UJ41 708 aa8.89□□□□□ -0.99
TRA2A-205ENST00000475970 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
TRA2A-205ENST00000475970 ANKK1Q8NFD2 765 aa8.87□□□□□ -0.99
TRA2A-205ENST00000475970 PROX2Q3B8N5 592 aa8.86□□□□□ -0.99
TRA2A-205ENST00000475970 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
TRA2A-205ENST00000475970 COL9A1P20849 921 aa8.85□□□□□ -0.99
TRA2A-205ENST00000475970 EN1Q05925 392 aaPredicted RBP8.85□□□□□ -0.99
TRA2A-205ENST00000475970 C6orf132Q5T0Z8 1188 aa8.84□□□□□ -0.99
TRA2A-205ENST00000475970 NUTM2FA1L443 756 aa8.83□□□□□ -1
TRA2A-205ENST00000475970 MAP3K7O43318 606 aa8.83□□□□□ -1
TRA2A-205ENST00000475970 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
TRA2A-205ENST00000475970 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
TRA2A-205ENST00000475970 GPIHBP1Q8IV16 184 aa8.82□□□□□ -1
TRA2A-205ENST00000475970 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
TRA2A-205ENST00000475970 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
TRA2A-205ENST00000475970 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
TRA2A-205ENST00000475970 IFFO2Q5TF58 517 aa8.8□□□□□ -1
TRA2A-205ENST00000475970 ZC3H15Q8WU90 426 aaKnown RBP8.79□□□□□ -1
TRA2A-205ENST00000475970 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
TRA2A-205ENST00000475970 TRIM6-TRIM34B2RNG4 842 aa8.78□□□□□ -1
TRA2A-205ENST00000475970 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
TRA2A-205ENST00000475970 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
TRA2A-205ENST00000475970 ZFRQ96KR1 1074 aaKnown RBP8.78□□□□□ -1
TRA2A-205ENST00000475970 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
TRA2A-205ENST00000475970 RGS20O76081 388 aa8.77□□□□□ -1.01
TRA2A-205ENST00000475970 BCAMP50895 628 aa8.77□□□□□ -1.01
TRA2A-205ENST00000475970 SEPT9Q9UHD8 586 aaPredicted RBP8.77□□□□□ -1.01
TRA2A-205ENST00000475970 GPR37O15354 613 aa8.76□□□□□ -1.01
TRA2A-205ENST00000475970 FCHSD2O94868 740 aa8.76□□□□□ -1.01
TRA2A-205ENST00000475970 PTGDRQ13258 359 aa8.76□□□□□ -1.01
TRA2A-205ENST00000475970 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
TRA2A-205ENST00000475970 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
TRA2A-205ENST00000475970 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
TRA2A-205ENST00000475970 A0A0G2JS52 829 aa8.74□□□□□ -1.01
TRA2A-205ENST00000475970 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
TRA2A-205ENST00000475970 ZMYND10O75800 440 aa8.73□□□□□ -1.01
TRA2A-205ENST00000475970 HIC1Q14526 733 aa8.73□□□□□ -1.01
TRA2A-205ENST00000475970 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
TRA2A-205ENST00000475970 GNPATO15228 680 aa8.72□□□□□ -1.01
TRA2A-205ENST00000475970 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
TRA2A-205ENST00000475970 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
TRA2A-205ENST00000475970 WBP1LQ9NX94 342 aa8.71□□□□□ -1.02
TRA2A-205ENST00000475970 ITGBL1O95965 494 aaPredicted RBP8.7□□□□□ -1.02
TRA2A-205ENST00000475970 FECHP22830 423 aa8.7□□□□□ -1.02
TRA2A-205ENST00000475970 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
TRA2A-205ENST00000475970 HPS5Q9UPZ3 1129 aa8.7□□□□□ -1.02
TRA2A-205ENST00000475970 PRSS12P56730 875 aa8.69□□□□□ -1.02
TRA2A-205ENST00000475970 KCNC4Q03721 635 aa8.68□□□□□ -1.02
TRA2A-205ENST00000475970 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
TRA2A-205ENST00000475970 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
TRA2A-205ENST00000475970 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
TRA2A-205ENST00000475970 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
TRA2A-205ENST00000475970 PADI6Q6TGC4 694 aa8.67□□□□□ -1.02
TRA2A-205ENST00000475970 IRX2Q9BZI1 471 aaPredicted RBP8.67□□□□□ -1.02
TRA2A-205ENST00000475970 PPP4CP60510 307 aa8.66□□□□□ -1.02
TRA2A-205ENST00000475970 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
TRA2A-205ENST00000475970 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
TRA2A-205ENST00000475970 MAP2K5Q13163 448 aa8.65□□□□□ -1.02
TRA2A-205ENST00000475970 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
TRA2A-205ENST00000475970 NECTIN2Q92692 538 aa8.65□□□□□ -1.02
TRA2A-205ENST00000475970 SLC24A3Q9HC58 644 aa8.65□□□□□ -1.02
TRA2A-205ENST00000475970 RBM27Q9P2N5 1060 aaKnown RBP8.65□□□□□ -1.02
TRA2A-205ENST00000475970 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
TRA2A-205ENST00000475970 IRF6O14896 467 aa8.63□□□□□ -1.03
TRA2A-205ENST00000475970 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
TRA2A-205ENST00000475970 SMAPO00193 183 aa8.62□□□□□ -1.03
TRA2A-205ENST00000475970 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms