RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 GLI2P10070 1586 aa13.91□□□□□ -0.18
SPTAN1-206ENST00000475367 MAP3K4Q9Y6R4 1608 aa13.91□□□□□ -0.18
SPTAN1-206ENST00000475367 KIF3BO15066 747 aa13.9□□□□□ -0.18
SPTAN1-206ENST00000475367 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
SPTAN1-206ENST00000475367 KDM5CP41229 1560 aa13.9□□□□□ -0.18
SPTAN1-206ENST00000475367 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-206ENST00000475367 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
SPTAN1-206ENST00000475367 CCDC144AA2RUR9 1427 aa13.88□□□□□ -0.19
SPTAN1-206ENST00000475367 MLH3Q9UHC1 1453 aa13.88□□□□□ -0.19
SPTAN1-206ENST00000475367 DEPDC5O75140 1603 aa13.88□□□□□ -0.19
SPTAN1-206ENST00000475367 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPTAN1-206ENST00000475367 DDX10Q13206 875 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-206ENST00000475367 KANK1Q14678 1352 aa13.87□□□□□ -0.19
SPTAN1-206ENST00000475367 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
SPTAN1-206ENST00000475367 A2MP01023 1474 aa13.87□□□□□ -0.19
SPTAN1-206ENST00000475367 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
SPTAN1-206ENST00000475367 DIP2BQ9P265 1576 aa13.86□□□□□ -0.19
SPTAN1-206ENST00000475367 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
SPTAN1-206ENST00000475367 ATP10AO60312 1499 aa13.85□□□□□ -0.19
SPTAN1-206ENST00000475367 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
SPTAN1-206ENST00000475367 VWDEQ8N2E2 1590 aa13.85□□□□□ -0.19
SPTAN1-206ENST00000475367 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
SPTAN1-206ENST00000475367 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
SPTAN1-206ENST00000475367 UHRF1BP1Q6BDS2 1440 aa13.84□□□□□ -0.19
SPTAN1-206ENST00000475367 E9PCH4 1651 aa13.84□□□□□ -0.19
SPTAN1-206ENST00000475367 MROH1Q8NDA8 1641 aa13.83□□□□□ -0.19
SPTAN1-206ENST00000475367 RGL3Q3MIN7 710 aa13.83□□□□□ -0.2
SPTAN1-206ENST00000475367 PRDM15P57071 1507 aaPredicted RBP13.83□□□□□ -0.2
SPTAN1-206ENST00000475367 TET3O43151 1660 aa13.82□□□□□ -0.2
SPTAN1-206ENST00000475367 FRMPD1Q5SYB0 1578 aa13.82□□□□□ -0.2
SPTAN1-206ENST00000475367 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
SPTAN1-206ENST00000475367 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
SPTAN1-206ENST00000475367 PTPRTO14522 1441 aa13.8□□□□□ -0.2
SPTAN1-206ENST00000475367 SPATA31E1Q6ZUB1 1445 aa13.8□□□□□ -0.2
SPTAN1-206ENST00000475367 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
SPTAN1-206ENST00000475367 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
SPTAN1-206ENST00000475367 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
SPTAN1-206ENST00000475367 TRPM2O94759 1503 aa13.78□□□□□ -0.2
SPTAN1-206ENST00000475367 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
SPTAN1-206ENST00000475367 GGT6Q6P531 493 aa13.78□□□□□ -0.2
SPTAN1-206ENST00000475367 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
SPTAN1-206ENST00000475367 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
SPTAN1-206ENST00000475367 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.21
SPTAN1-206ENST00000475367 YEATS2Q9ULM3 1422 aa13.77□□□□□ -0.21
SPTAN1-206ENST00000475367 LMTK2Q8IWU2 1503 aa13.76□□□□□ -0.21
SPTAN1-206ENST00000475367 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
SPTAN1-206ENST00000475367 USP47Q96K76 1375 aa13.76□□□□□ -0.21
SPTAN1-206ENST00000475367 PRAG1Q86YV5 1406 aa13.76□□□□□ -0.21
SPTAN1-206ENST00000475367 EFCAB6Q5THR3 1501 aa13.75□□□□□ -0.21
SPTAN1-206ENST00000475367 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
SPTAN1-206ENST00000475367 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
SPTAN1-206ENST00000475367 BCORL1Q5H9F3 1711 aa13.75□□□□□ -0.21
SPTAN1-206ENST00000475367 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
SPTAN1-206ENST00000475367 CEP152O94986 1710 aa13.74□□□□□ -0.21
SPTAN1-206ENST00000475367 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
SPTAN1-206ENST00000475367 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
SPTAN1-206ENST00000475367 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
SPTAN1-206ENST00000475367 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
SPTAN1-206ENST00000475367 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-206ENST00000475367 ABCC3O15438 1527 aa13.72□□□□□ -0.21
SPTAN1-206ENST00000475367 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 ANP32CO43423 234 aa13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 UGGT1Q9NYU2 1555 aa13.7□□□□□ -0.22
SPTAN1-206ENST00000475367 NPATQ14207 1427 aa13.69□□□□□ -0.22
SPTAN1-206ENST00000475367 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
SPTAN1-206ENST00000475367 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
SPTAN1-206ENST00000475367 STAC3Q96MF2 364 aa13.67□□□□□ -0.22
SPTAN1-206ENST00000475367 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-206ENST00000475367 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
SPTAN1-206ENST00000475367 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
SPTAN1-206ENST00000475367 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
SPTAN1-206ENST00000475367 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
SPTAN1-206ENST00000475367 POLR1AO95602 1720 aaPredicted RBP13.65□□□□□ -0.22
SPTAN1-206ENST00000475367 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
SPTAN1-206ENST00000475367 KIF1BO60333 1816 aa13.64□□□□□ -0.23
SPTAN1-206ENST00000475367 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
SPTAN1-206ENST00000475367 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-206ENST00000475367 POLR3GLQ9BT43 218 aa13.63□□□□□ -0.23
SPTAN1-206ENST00000475367 LAMC1P11047 1609 aa13.63□□□□□ -0.23
SPTAN1-206ENST00000475367 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
SPTAN1-206ENST00000475367 NOS1P29475 1434 aa13.62□□□□□ -0.23
SPTAN1-206ENST00000475367 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
SPTAN1-206ENST00000475367 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
SPTAN1-206ENST00000475367 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-206ENST00000475367 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
SPTAN1-206ENST00000475367 MROH2AA6NES4 1674 aa13.61□□□□□ -0.23
SPTAN1-206ENST00000475367 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
SPTAN1-206ENST00000475367 AGLP35573 1532 aa13.61□□□□□ -0.23
SPTAN1-206ENST00000475367 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
SPTAN1-206ENST00000475367 MYOM2P54296 1465 aa13.59□□□□□ -0.23
SPTAN1-206ENST00000475367 SYNMO15061 1565 aa13.59□□□□□ -0.23
SPTAN1-206ENST00000475367 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
SPTAN1-206ENST00000475367 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
SPTAN1-206ENST00000475367 IFT172Q9UG01 1749 aa13.57□□□□□ -0.24
SPTAN1-206ENST00000475367 MLECQ14165 292 aa13.57□□□□□ -0.24
SPTAN1-206ENST00000475367 TESK2Q96S53 571 aa13.57□□□□□ -0.24
SPTAN1-206ENST00000475367 CFAP70Q5T0N1 1121 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms