RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.485e-10■■■■■ 36.6
SPTAN1-206ENST00000475367 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■■ 28
SPTAN1-206ENST00000475367 RPS3P23396 243 aaKnown RBP eCLIP9.73□□□□□ -0.854e-7■■■■□ 26.4
SPTAN1-206ENST00000475367 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.643e-11■■■■□ 23.9
SPTAN1-206ENST00000475367 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.124e-6■■■■□ 23.6
SPTAN1-206ENST00000475367 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.786e-7■■■■□ 23
SPTAN1-206ENST00000475367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.164e-9■■■■□ 22.3
SPTAN1-206ENST00000475367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.426e-8■■■■□ 22.3
SPTAN1-206ENST00000475367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.618e-10■■■□□ 16.8
SPTAN1-206ENST00000475367 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.26□□□□□ -0.779e-7■■■□□ 16.8
SPTAN1-206ENST00000475367 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.755e-8■■■□□ 16.6
SPTAN1-206ENST00000475367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.992e-8■■□□□ 13.3
SPTAN1-206ENST00000475367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.88□□□□□ -0.673e-6■■□□□ 12.3
SPTAN1-206ENST00000475367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.74□□□□□ -1.173e-10■□□□□ 11.1
SPTAN1-206ENST00000475367 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.597e-9■□□□□ 10.4
SPTAN1-206ENST00000475367 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.817e-6■□□□□ 9.9
SPTAN1-206ENST00000475367 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.712e-7■□□□□ 9.2
SPTAN1-206ENST00000475367 TRA2AQ13595 282 aaKnown RBP eCLIP9.02□□□□□ -0.978e-6■□□□□ 9
SPTAN1-206ENST00000475367 AGGF1Q8N302 714 aaeCLIP10.1□□□□□ -0.798e-6■□□□□ 8.6
SPTAN1-206ENST00000475367 FTOQ9C0B1 505 aaKnown RBP eCLIP11.41□□□□□ -0.582e-7■□□□□ 8.6
SPTAN1-206ENST00000475367 EFTUD2Q15029 972 aaKnown RBP eCLIP10.08□□□□□ -0.81e-5■□□□□ 8.3
Retrieved 21 of 21 RNA–protein pairs in 6.7 ms