RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
SNRPB-203ENST00000474384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
SNRPB-203ENST00000474384 NAIPQ13075 1403 aa27.3■■□□□ 1.96
SNRPB-203ENST00000474384 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
SNRPB-203ENST00000474384 PTPRMP28827 1452 aa27.27■■□□□ 1.96
SNRPB-203ENST00000474384 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
SNRPB-203ENST00000474384 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
SNRPB-203ENST00000474384 PLPPR3Q6T4P5 718 aa27.26■■□□□ 1.95
SNRPB-203ENST00000474384 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
SNRPB-203ENST00000474384 CLTCQ00610 1675 aaKnown RBP27.25■■□□□ 1.95
SNRPB-203ENST00000474384 GCC2Q8IWJ2 1684 aa27.25■■□□□ 1.95
SNRPB-203ENST00000474384 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
SNRPB-203ENST00000474384 DEPDC5O75140 1603 aa27.24■■□□□ 1.95
SNRPB-203ENST00000474384 CEBPAP49715 358 aaPredicted RBP27.22■■□□□ 1.95
SNRPB-203ENST00000474384 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
SNRPB-203ENST00000474384 KDM5DQ9BY66 1539 aa27.21■■□□□ 1.95
SNRPB-203ENST00000474384 KANK1Q14678 1352 aa27.21■■□□□ 1.95
SNRPB-203ENST00000474384 ZMYM3Q14202 1370 aa27.2■■□□□ 1.94
SNRPB-203ENST00000474384 FAM135AQ9P2D6 1515 aa27.19■■□□□ 1.94
SNRPB-203ENST00000474384 ABCC3O15438 1527 aa27.18■■□□□ 1.94
SNRPB-203ENST00000474384 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
SNRPB-203ENST00000474384 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
SNRPB-203ENST00000474384 UNC13BO14795 1591 aa27.17■■□□□ 1.94
SNRPB-203ENST00000474384 CEP152O94986 1710 aa27.16■■□□□ 1.94
SNRPB-203ENST00000474384 C3P01024 1663 aa27.16■■□□□ 1.94
SNRPB-203ENST00000474384 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
SNRPB-203ENST00000474384 SETD5Q9C0A6 1442 aa27.15■■□□□ 1.94
SNRPB-203ENST00000474384 VWDEQ8N2E2 1590 aa27.14■■□□□ 1.94
SNRPB-203ENST00000474384 NUP155O75694 1391 aa27.13■■□□□ 1.93
SNRPB-203ENST00000474384 CAMSAP1Q5T5Y3 1602 aa27.09■■□□□ 1.93
SNRPB-203ENST00000474384 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
SNRPB-203ENST00000474384 LMTK2Q8IWU2 1503 aa27.09■■□□□ 1.93
SNRPB-203ENST00000474384 FBXO31Q5XUX0 539 aaPredicted RBP27.07■■□□□ 1.92
SNRPB-203ENST00000474384 IQGAP3Q86VI3 1631 aa27.06■■□□□ 1.92
SNRPB-203ENST00000474384 RAB3GAP2Q9H2M9 1393 aa27.06■■□□□ 1.92
SNRPB-203ENST00000474384 PZPP20742 1482 aa27.06■■□□□ 1.92
SNRPB-203ENST00000474384 ARHGAP31Q2M1Z3 1444 aa27.02■■□□□ 1.92
SNRPB-203ENST00000474384 TET3O43151 1660 aa27.01■■□□□ 1.92
SNRPB-203ENST00000474384 NPATQ14207 1427 aa27.01■■□□□ 1.91
SNRPB-203ENST00000474384 EFCAB6Q5THR3 1501 aa27■■□□□ 1.91
SNRPB-203ENST00000474384 CFAP65Q6ZU64 1925 aaKnown RBP27■■□□□ 1.91
SNRPB-203ENST00000474384 SETD1BQ9UPS6 1966 aaKnown RBP26.97■■□□□ 1.91
SNRPB-203ENST00000474384 ACIN1Q9UKV3 1341 aaKnown RBP26.95■■□□□ 1.91
SNRPB-203ENST00000474384 ERVK-7P63135 1459 aa26.95■■□□□ 1.91
SNRPB-203ENST00000474384 HRCP23327 699 aa26.95■■□□□ 1.9
SNRPB-203ENST00000474384 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
SNRPB-203ENST00000474384 TNRQ92752 1358 aa26.95■■□□□ 1.9
SNRPB-203ENST00000474384 E9PCH4 1651 aa26.94■■□□□ 1.9
SNRPB-203ENST00000474384 PREX1Q8TCU6 1659 aa26.94■■□□□ 1.9
SNRPB-203ENST00000474384 SPATA31D1Q6ZQQ2 1576 aa26.92■■□□□ 1.9
SNRPB-203ENST00000474384 RPRD2Q5VT52 1461 aaKnown RBP26.92■■□□□ 1.9
SNRPB-203ENST00000474384 PKD2Q13563 968 aa26.9■■□□□ 1.9
SNRPB-203ENST00000474384 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
SNRPB-203ENST00000474384 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
SNRPB-203ENST00000474384 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
SNRPB-203ENST00000474384 NOS1P29475 1434 aa26.87■■□□□ 1.89
SNRPB-203ENST00000474384 LMTK3Q96Q04 1460 aa26.87■■□□□ 1.89
SNRPB-203ENST00000474384 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
SNRPB-203ENST00000474384 SYNMO15061 1565 aa26.84■■□□□ 1.89
SNRPB-203ENST00000474384 FOXD1Q16676 465 aa26.83■■□□□ 1.89
SNRPB-203ENST00000474384 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
SNRPB-203ENST00000474384 HSPA2P54652 639 aa26.81■■□□□ 1.88
SNRPB-203ENST00000474384 CEP170BQ9Y4F5 1589 aaPredicted RBP26.8■■□□□ 1.88
SNRPB-203ENST00000474384 A2ML1A8K2U0 1454 aa26.8■■□□□ 1.88
SNRPB-203ENST00000474384 IDI1Q13907 227 aa26.79■■□□□ 1.88
SNRPB-203ENST00000474384 SLC52A1Q9NWF4 448 aa26.78■■□□□ 1.88
SNRPB-203ENST00000474384 PTPRTO14522 1441 aa26.78■■□□□ 1.88
SNRPB-203ENST00000474384 ZNF142P52746 1687 aaPredicted RBP26.78■■□□□ 1.88
SNRPB-203ENST00000474384 SPHKAPQ2M3C7 1700 aa26.77■■□□□ 1.88
SNRPB-203ENST00000474384 UGGT1Q9NYU2 1555 aa26.75■■□□□ 1.87
SNRPB-203ENST00000474384 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
SNRPB-203ENST00000474384 PIK3C2BO00750 1634 aa26.74■■□□□ 1.87
SNRPB-203ENST00000474384 STAG3Q9UJ98 1225 aa26.71■■□□□ 1.87
SNRPB-203ENST00000474384 TRPM2O94759 1503 aa26.7■■□□□ 1.87
SNRPB-203ENST00000474384 THEMISQ8N1K5 641 aaPredicted RBP26.7■■□□□ 1.86
SNRPB-203ENST00000474384 UBR1Q8IWV7 1749 aa26.69■■□□□ 1.86
SNRPB-203ENST00000474384 CHGAP10645 457 aaKnown RBP26.68■■□□□ 1.86
SNRPB-203ENST00000474384 CLTCL1P53675 1640 aa26.66■■□□□ 1.86
SNRPB-203ENST00000474384 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
SNRPB-203ENST00000474384 TMEM131LA2VDJ0 1609 aa26.62■■□□□ 1.85
SNRPB-203ENST00000474384 KDM5AP29375 1690 aaKnown RBP26.62■■□□□ 1.85
SNRPB-203ENST00000474384 MYO5BQ9ULV0 1848 aa26.6■■□□□ 1.85
SNRPB-203ENST00000474384 ANKRD30BQ9BXX2 1392 aa26.6■■□□□ 1.85
SNRPB-203ENST00000474384 CCDC144AA2RUR9 1427 aa26.6■■□□□ 1.85
SNRPB-203ENST00000474384 NCKAP5LQ9HCH0 1330 aa26.6■■□□□ 1.85
SNRPB-203ENST00000474384 STRCQ7RTU9 1775 aa26.58■■□□□ 1.85
SNRPB-203ENST00000474384 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.84
SNRPB-203ENST00000474384 ANKLE2Q86XL3 938 aa26.57■■□□□ 1.84
SNRPB-203ENST00000474384 TMEM2Q9UHN6 1383 aa26.57■■□□□ 1.84
SNRPB-203ENST00000474384 KIF1BO60333 1816 aa26.56■■□□□ 1.84
SNRPB-203ENST00000474384 SLIT1O75093 1534 aa26.55■■□□□ 1.84
SNRPB-203ENST00000474384 ARHGAP23Q9P227 1491 aa26.55■■□□□ 1.84
SNRPB-203ENST00000474384 ZNF326Q5BKZ1 582 aaKnown RBP26.54■■□□□ 1.84
SNRPB-203ENST00000474384 TXNDC2Q86VQ3 553 aa26.54■■□□□ 1.84
SNRPB-203ENST00000474384 LTKP29376 864 aa26.53■■□□□ 1.84
SNRPB-203ENST00000474384 EID1Q9Y6B2 187 aa26.52■■□□□ 1.84
SNRPB-203ENST00000474384 RIMS2Q9UQ26 1411 aa26.5■■□□□ 1.83
SNRPB-203ENST00000474384 POLR1AO95602 1720 aaPredicted RBP26.49■■□□□ 1.83
SNRPB-203ENST00000474384 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
SNRPB-203ENST00000474384 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms