RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 RNF17Q9BXT8 1623 aaKnown RBP28■■■□□ 2.07
CASP9-209ENST00000474305 ESF1Q9H501 851 aaKnown RBP28■■■□□ 2.07
CASP9-209ENST00000474305 CNTLNQ9NXG0 1405 aa27.99■■■□□ 2.07
CASP9-209ENST00000474305 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
CASP9-209ENST00000474305 FAM135AQ9P2D6 1515 aa27.95■■■□□ 2.06
CASP9-209ENST00000474305 MROH1Q8NDA8 1641 aa27.93■■■□□ 2.06
CASP9-209ENST00000474305 DEPDC5O75140 1603 aa27.92■■■□□ 2.06
CASP9-209ENST00000474305 WASHC2CQ9Y4E1 1318 aa27.92■■■□□ 2.06
CASP9-209ENST00000474305 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
CASP9-209ENST00000474305 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
CASP9-209ENST00000474305 NAIPQ13075 1403 aa27.91■■■□□ 2.06
CASP9-209ENST00000474305 CLTCQ00610 1675 aaKnown RBP27.91■■■□□ 2.06
CASP9-209ENST00000474305 KDM5DQ9BY66 1539 aa27.89■■■□□ 2.06
CASP9-209ENST00000474305 HFM1A2PYH4 1435 aa27.89■■■□□ 2.06
CASP9-209ENST00000474305 PRDM15P57071 1507 aaPredicted RBP27.88■■■□□ 2.05
CASP9-209ENST00000474305 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
CASP9-209ENST00000474305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.86■■■□□ 2.05
CASP9-209ENST00000474305 C3P01024 1663 aa27.86■■■□□ 2.05
CASP9-209ENST00000474305 GCC2Q8IWJ2 1684 aa27.85■■■□□ 2.05
CASP9-209ENST00000474305 KANK1Q14678 1352 aa27.85■■■□□ 2.05
CASP9-209ENST00000474305 ABCC3O15438 1527 aa27.84■■■□□ 2.05
CASP9-209ENST00000474305 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
CASP9-209ENST00000474305 ZC3H13Q5T200 1668 aaKnown RBP27.84■■■□□ 2.05
CASP9-209ENST00000474305 VWDEQ8N2E2 1590 aa27.83■■■□□ 2.05
CASP9-209ENST00000474305 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
CASP9-209ENST00000474305 UNC13BO14795 1591 aa27.8■■■□□ 2.04
CASP9-209ENST00000474305 CEP152O94986 1710 aa27.78■■■□□ 2.04
CASP9-209ENST00000474305 LMTK2Q8IWU2 1503 aa27.78■■■□□ 2.04
CASP9-209ENST00000474305 NPATQ14207 1427 aa27.75■■■□□ 2.03
CASP9-209ENST00000474305 PZPP20742 1482 aa27.75■■■□□ 2.03
CASP9-209ENST00000474305 ARHGAP31Q2M1Z3 1444 aa27.75■■■□□ 2.03
CASP9-209ENST00000474305 CAMSAP1Q5T5Y3 1602 aa27.73■■■□□ 2.03
CASP9-209ENST00000474305 NUP155O75694 1391 aa27.73■■■□□ 2.03
CASP9-209ENST00000474305 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
CASP9-209ENST00000474305 FBXO31Q5XUX0 539 aaPredicted RBP27.71■■■□□ 2.03
CASP9-209ENST00000474305 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.02
CASP9-209ENST00000474305 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
CASP9-209ENST00000474305 CFAP65Q6ZU64 1925 aaKnown RBP27.68■■■□□ 2.02
CASP9-209ENST00000474305 TET3O43151 1660 aa27.66■■■□□ 2.02
CASP9-209ENST00000474305 TRIM26Q12899 539 aaPredicted RBP27.66■■■□□ 2.02
CASP9-209ENST00000474305 EFCAB6Q5THR3 1501 aa27.65■■■□□ 2.02
CASP9-209ENST00000474305 PREX1Q8TCU6 1659 aa27.63■■■□□ 2.01
CASP9-209ENST00000474305 HRCP23327 699 aa27.63■■■□□ 2.01
CASP9-209ENST00000474305 SPATA31D1Q6ZQQ2 1576 aa27.62■■■□□ 2.01
CASP9-209ENST00000474305 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
CASP9-209ENST00000474305 TNRQ92752 1358 aa27.61■■■□□ 2.01
CASP9-209ENST00000474305 ERVK-7P63135 1459 aa27.61■■■□□ 2.01
CASP9-209ENST00000474305 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
CASP9-209ENST00000474305 RAB3GAP2Q9H2M9 1393 aa27.6■■■□□ 2.01
CASP9-209ENST00000474305 UHRF1BP1Q6BDS2 1440 aa27.59■■■□□ 2.01
CASP9-209ENST00000474305 LMTK3Q96Q04 1460 aa27.59■■■□□ 2.01
CASP9-209ENST00000474305 E9PCH4 1651 aa27.56■■■□□ 2
CASP9-209ENST00000474305 NOS1P29475 1434 aa27.56■■■□□ 2
CASP9-209ENST00000474305 MYO3AQ8NEV4 1616 aa27.53■■■□□ 2
CASP9-209ENST00000474305 NLRP1Q9C000 1473 aa27.52■■■□□ 2
CASP9-209ENST00000474305 SLC4A1APQ9BWU0 796 aaKnown RBP27.52■■■□□ 2
CASP9-209ENST00000474305 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
CASP9-209ENST00000474305 ZNF142P52746 1687 aaPredicted RBP27.49■■□□□ 1.99
CASP9-209ENST00000474305 PKD2Q13563 968 aa27.49■■□□□ 1.99
CASP9-209ENST00000474305 MPHOSPH9Q99550 1183 aa27.49■■□□□ 1.99
CASP9-209ENST00000474305 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
CASP9-209ENST00000474305 SLC52A1Q9NWF4 448 aa27.48■■□□□ 1.99
CASP9-209ENST00000474305 HSPA2P54652 639 aa27.47■■□□□ 1.99
CASP9-209ENST00000474305 SYNMO15061 1565 aa27.47■■□□□ 1.99
CASP9-209ENST00000474305 IDI1Q13907 227 aa27.46■■□□□ 1.99
CASP9-209ENST00000474305 PTPRTO14522 1441 aa27.45■■□□□ 1.98
CASP9-209ENST00000474305 THEMISQ8N1K5 641 aaPredicted RBP27.41■■□□□ 1.98
CASP9-209ENST00000474305 UGGT1Q9NYU2 1555 aa27.39■■□□□ 1.98
CASP9-209ENST00000474305 SPHKAPQ2M3C7 1700 aa27.39■■□□□ 1.98
CASP9-209ENST00000474305 PIK3C2BO00750 1634 aa27.38■■□□□ 1.97
CASP9-209ENST00000474305 PLA2R1Q13018 1463 aa27.37■■□□□ 1.97
CASP9-209ENST00000474305 UBR1Q8IWV7 1749 aa27.36■■□□□ 1.97
CASP9-209ENST00000474305 KDM5AP29375 1690 aaKnown RBP27.36■■□□□ 1.97
CASP9-209ENST00000474305 FOXD1Q16676 465 aa27.35■■□□□ 1.97
CASP9-209ENST00000474305 TRPM2O94759 1503 aa27.33■■□□□ 1.97
CASP9-209ENST00000474305 STAG3Q9UJ98 1225 aa27.32■■□□□ 1.96
CASP9-209ENST00000474305 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
CASP9-209ENST00000474305 ADGRB3O60242 1522 aa27.28■■□□□ 1.96
CASP9-209ENST00000474305 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
CASP9-209ENST00000474305 ANKLE2Q86XL3 938 aa27.26■■□□□ 1.95
CASP9-209ENST00000474305 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
CASP9-209ENST00000474305 SLIT1O75093 1534 aa27.26■■□□□ 1.95
CASP9-209ENST00000474305 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
CASP9-209ENST00000474305 DMRT2Q9Y5R5 561 aa27.25■■□□□ 1.95
CASP9-209ENST00000474305 TMEM2Q9UHN6 1383 aa27.24■■□□□ 1.95
CASP9-209ENST00000474305 NCKAP5LQ9HCH0 1330 aa27.24■■□□□ 1.95
CASP9-209ENST00000474305 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
CASP9-209ENST00000474305 MYO5BQ9ULV0 1848 aa27.24■■□□□ 1.95
CASP9-209ENST00000474305 CHGAP10645 457 aaKnown RBP27.22■■□□□ 1.95
CASP9-209ENST00000474305 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
CASP9-209ENST00000474305 KIF1BO60333 1816 aa27.2■■□□□ 1.95
CASP9-209ENST00000474305 CCDC144AA2RUR9 1427 aa27.19■■□□□ 1.94
CASP9-209ENST00000474305 LTKP29376 864 aa27.19■■□□□ 1.94
CASP9-209ENST00000474305 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
CASP9-209ENST00000474305 EID1Q9Y6B2 187 aa27.18■■□□□ 1.94
CASP9-209ENST00000474305 POLR1AO95602 1720 aaPredicted RBP27.18■■□□□ 1.94
CASP9-209ENST00000474305 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
CASP9-209ENST00000474305 MED14O60244 1454 aa27.17■■□□□ 1.94
CASP9-209ENST00000474305 SCAF11Q99590 1463 aaKnown RBP27.15■■□□□ 1.94
CASP9-209ENST00000474305 ZFYVE9O95405 1425 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms