RNA–Protein interactions for RNA: ENST00000474158.1

ABCC4-204, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-204ENST00000474158 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
ABCC4-204ENST00000474158 KIF14Q15058 1648 aa13.75□□□□□ -0.21
ABCC4-204ENST00000474158 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
ABCC4-204ENST00000474158 ARHGAP5Q13017 1502 aa13.73□□□□□ -0.21
ABCC4-204ENST00000474158 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
ABCC4-204ENST00000474158 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
ABCC4-204ENST00000474158 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
ABCC4-204ENST00000474158 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
ABCC4-204ENST00000474158 A2ML1A8K2U0 1454 aa13.69□□□□□ -0.22
ABCC4-204ENST00000474158 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
ABCC4-204ENST00000474158 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
ABCC4-204ENST00000474158 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
ABCC4-204ENST00000474158 ABCC1P33527 1531 aa13.65□□□□□ -0.22
ABCC4-204ENST00000474158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.23
ABCC4-204ENST00000474158 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
ABCC4-204ENST00000474158 GGT6Q6P531 493 aa13.62□□□□□ -0.23
ABCC4-204ENST00000474158 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
ABCC4-204ENST00000474158 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
ABCC4-204ENST00000474158 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
ABCC4-204ENST00000474158 NPHP4O75161 1426 aaPredicted RBP13.61□□□□□ -0.23
ABCC4-204ENST00000474158 SAMD9LQ8IVG5 1584 aa13.6□□□□□ -0.23
ABCC4-204ENST00000474158 MED14O60244 1454 aa13.6□□□□□ -0.23
ABCC4-204ENST00000474158 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
ABCC4-204ENST00000474158 PLXNC1O60486 1568 aa13.58□□□□□ -0.23
ABCC4-204ENST00000474158 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
ABCC4-204ENST00000474158 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
ABCC4-204ENST00000474158 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
ABCC4-204ENST00000474158 SYNMO15061 1565 aa13.58□□□□□ -0.24
ABCC4-204ENST00000474158 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
ABCC4-204ENST00000474158 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
ABCC4-204ENST00000474158 TNRQ92752 1358 aa13.56□□□□□ -0.24
ABCC4-204ENST00000474158 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
ABCC4-204ENST00000474158 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
ABCC4-204ENST00000474158 A2MP01023 1474 aa13.54□□□□□ -0.24
ABCC4-204ENST00000474158 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
ABCC4-204ENST00000474158 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
ABCC4-204ENST00000474158 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
ABCC4-204ENST00000474158 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
ABCC4-204ENST00000474158 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
ABCC4-204ENST00000474158 POLA2Q14181 598 aa13.52□□□□□ -0.25
ABCC4-204ENST00000474158 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
ABCC4-204ENST00000474158 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
ABCC4-204ENST00000474158 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.25
ABCC4-204ENST00000474158 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
ABCC4-204ENST00000474158 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
ABCC4-204ENST00000474158 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
ABCC4-204ENST00000474158 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
ABCC4-204ENST00000474158 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
ABCC4-204ENST00000474158 CLIP1P30622 1438 aa13.49□□□□□ -0.25
ABCC4-204ENST00000474158 LRP6O75581 1613 aa13.47□□□□□ -0.25
ABCC4-204ENST00000474158 FAM135AQ9P2D6 1515 aa13.47□□□□□ -0.25
ABCC4-204ENST00000474158 PZPP20742 1482 aa13.46□□□□□ -0.25
ABCC4-204ENST00000474158 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
ABCC4-204ENST00000474158 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
ABCC4-204ENST00000474158 PHLPP1O60346 1717 aa13.44□□□□□ -0.26
ABCC4-204ENST00000474158 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
ABCC4-204ENST00000474158 NLRP1Q9C000 1473 aa13.43□□□□□ -0.26
ABCC4-204ENST00000474158 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
ABCC4-204ENST00000474158 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
ABCC4-204ENST00000474158 JCADQ9P266 1359 aa13.42□□□□□ -0.26
ABCC4-204ENST00000474158 EP400Q96L91 3159 aa13.42□□□□□ -0.26
ABCC4-204ENST00000474158 RXRBP28702 533 aa13.41□□□□□ -0.26
ABCC4-204ENST00000474158 LTKP29376 864 aa13.41□□□□□ -0.26
ABCC4-204ENST00000474158 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
ABCC4-204ENST00000474158 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
ABCC4-204ENST00000474158 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
ABCC4-204ENST00000474158 ZBTB22O15209 634 aa13.39□□□□□ -0.27
ABCC4-204ENST00000474158 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
ABCC4-204ENST00000474158 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
ABCC4-204ENST00000474158 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
ABCC4-204ENST00000474158 CFAP65Q6ZU64 1925 aaKnown RBP13.38□□□□□ -0.27
ABCC4-204ENST00000474158 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
ABCC4-204ENST00000474158 KIF3BO15066 747 aa13.37□□□□□ -0.27
ABCC4-204ENST00000474158 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
ABCC4-204ENST00000474158 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
ABCC4-204ENST00000474158 UBR1Q8IWV7 1749 aa13.36□□□□□ -0.27
ABCC4-204ENST00000474158 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
ABCC4-204ENST00000474158 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
ABCC4-204ENST00000474158 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
ABCC4-204ENST00000474158 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
ABCC4-204ENST00000474158 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
ABCC4-204ENST00000474158 RGS12O14924 1447 aa13.34□□□□□ -0.27
ABCC4-204ENST00000474158 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
ABCC4-204ENST00000474158 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
ABCC4-204ENST00000474158 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
ABCC4-204ENST00000474158 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
ABCC4-204ENST00000474158 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
ABCC4-204ENST00000474158 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
ABCC4-204ENST00000474158 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
ABCC4-204ENST00000474158 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
ABCC4-204ENST00000474158 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
ABCC4-204ENST00000474158 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
ABCC4-204ENST00000474158 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
ABCC4-204ENST00000474158 ARHGAP23Q9P227 1491 aa13.3□□□□□ -0.28
ABCC4-204ENST00000474158 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
ABCC4-204ENST00000474158 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
ABCC4-204ENST00000474158 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
ABCC4-204ENST00000474158 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
ABCC4-204ENST00000474158 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
ABCC4-204ENST00000474158 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms