RNA–Protein interactions for RNA: ENST00000474158.1

ABCC4-204, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-204ENST00000474158 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
ABCC4-204ENST00000474158 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
ABCC4-204ENST00000474158 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
ABCC4-204ENST00000474158 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
ABCC4-204ENST00000474158 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
ABCC4-204ENST00000474158 ABCC9O60706 1549 aa20.12■□□□□ 0.81
ABCC4-204ENST00000474158 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
ABCC4-204ENST00000474158 FOXD1Q16676 465 aa19.36■□□□□ 0.69
ABCC4-204ENST00000474158 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
ABCC4-204ENST00000474158 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
ABCC4-204ENST00000474158 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
ABCC4-204ENST00000474158 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
ABCC4-204ENST00000474158 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
ABCC4-204ENST00000474158 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
ABCC4-204ENST00000474158 NACADO15069 1562 aa18.33■□□□□ 0.52
ABCC4-204ENST00000474158 MSH5O43196 834 aa18.32■□□□□ 0.52
ABCC4-204ENST00000474158 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
ABCC4-204ENST00000474158 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
ABCC4-204ENST00000474158 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
ABCC4-204ENST00000474158 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
ABCC4-204ENST00000474158 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
ABCC4-204ENST00000474158 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
ABCC4-204ENST00000474158 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
ABCC4-204ENST00000474158 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
ABCC4-204ENST00000474158 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
ABCC4-204ENST00000474158 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
ABCC4-204ENST00000474158 ADRA2BP18089 450 aa17.59■□□□□ 0.41
ABCC4-204ENST00000474158 CUX2O14529 1486 aa17.58■□□□□ 0.41
ABCC4-204ENST00000474158 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
ABCC4-204ENST00000474158 TRIM41Q8WV44 630 aa17.5■□□□□ 0.39
ABCC4-204ENST00000474158 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
ABCC4-204ENST00000474158 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
ABCC4-204ENST00000474158 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
ABCC4-204ENST00000474158 NESP48681 1621 aa17.09■□□□□ 0.33
ABCC4-204ENST00000474158 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
ABCC4-204ENST00000474158 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
ABCC4-204ENST00000474158 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
ABCC4-204ENST00000474158 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
ABCC4-204ENST00000474158 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
ABCC4-204ENST00000474158 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
ABCC4-204ENST00000474158 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
ABCC4-204ENST00000474158 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
ABCC4-204ENST00000474158 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
ABCC4-204ENST00000474158 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
ABCC4-204ENST00000474158 RIMBP3BA6NNM3 1639 aa16.62■□□□□ 0.25
ABCC4-204ENST00000474158 RIMBP3Q9UFD9 1639 aa16.62■□□□□ 0.25
ABCC4-204ENST00000474158 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
ABCC4-204ENST00000474158 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
ABCC4-204ENST00000474158 BAZ1BQ9UIG0 1483 aaKnown RBP16.58■□□□□ 0.24
ABCC4-204ENST00000474158 WDR62O43379 1518 aa16.55■□□□□ 0.24
ABCC4-204ENST00000474158 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
ABCC4-204ENST00000474158 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
ABCC4-204ENST00000474158 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
ABCC4-204ENST00000474158 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
ABCC4-204ENST00000474158 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
ABCC4-204ENST00000474158 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
ABCC4-204ENST00000474158 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
ABCC4-204ENST00000474158 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
ABCC4-204ENST00000474158 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
ABCC4-204ENST00000474158 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
ABCC4-204ENST00000474158 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
ABCC4-204ENST00000474158 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
ABCC4-204ENST00000474158 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
ABCC4-204ENST00000474158 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
ABCC4-204ENST00000474158 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
ABCC4-204ENST00000474158 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
ABCC4-204ENST00000474158 CHD1O14646 1710 aa16.08■□□□□ 0.16
ABCC4-204ENST00000474158 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
ABCC4-204ENST00000474158 CFTRP13569 1480 aa16.05■□□□□ 0.16
ABCC4-204ENST00000474158 WIZO95785 1651 aa16.03■□□□□ 0.16
ABCC4-204ENST00000474158 IFT140Q96RY7 1462 aa16■□□□□ 0.15
ABCC4-204ENST00000474158 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
ABCC4-204ENST00000474158 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
ABCC4-204ENST00000474158 FBLN2P98095 1184 aa15.94■□□□□ 0.14
ABCC4-204ENST00000474158 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
ABCC4-204ENST00000474158 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
ABCC4-204ENST00000474158 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
ABCC4-204ENST00000474158 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
ABCC4-204ENST00000474158 TARBP1Q13395 1621 aaKnown RBP15.8■□□□□ 0.12
ABCC4-204ENST00000474158 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
ABCC4-204ENST00000474158 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
ABCC4-204ENST00000474158 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.11
ABCC4-204ENST00000474158 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
ABCC4-204ENST00000474158 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
ABCC4-204ENST00000474158 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
ABCC4-204ENST00000474158 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
ABCC4-204ENST00000474158 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
ABCC4-204ENST00000474158 KIF13AQ9H1H9 1805 aa15.67■□□□□ 0.1
ABCC4-204ENST00000474158 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
ABCC4-204ENST00000474158 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
ABCC4-204ENST00000474158 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
ABCC4-204ENST00000474158 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
ABCC4-204ENST00000474158 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
ABCC4-204ENST00000474158 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
ABCC4-204ENST00000474158 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
ABCC4-204ENST00000474158 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
ABCC4-204ENST00000474158 SOGA1O94964 1423 aa15.54■□□□□ 0.08
ABCC4-204ENST00000474158 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
ABCC4-204ENST00000474158 SYNJ2O15056 1496 aa15.52■□□□□ 0.07
ABCC4-204ENST00000474158 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms