RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
DDX56-209ENST00000473924 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
DDX56-209ENST00000473924 CNTLNQ9NXG0 1405 aa18.76■□□□□ 0.59
DDX56-209ENST00000473924 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
DDX56-209ENST00000473924 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
DDX56-209ENST00000473924 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
DDX56-209ENST00000473924 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
DDX56-209ENST00000473924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDX56-209ENST00000473924 CEBPAP49715 358 aaPredicted RBP18.72■□□□□ 0.59
DDX56-209ENST00000473924 KDM5DQ9BY66 1539 aa18.71■□□□□ 0.59
DDX56-209ENST00000473924 KANK1Q14678 1352 aa18.7■□□□□ 0.58
DDX56-209ENST00000473924 FAM135AQ9P2D6 1515 aa18.7■□□□□ 0.58
DDX56-209ENST00000473924 MROH2AA6NES4 1674 aa18.7■□□□□ 0.58
DDX56-209ENST00000473924 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
DDX56-209ENST00000473924 C3P01024 1663 aa18.69■□□□□ 0.58
DDX56-209ENST00000473924 MROH1Q8NDA8 1641 aa18.68■□□□□ 0.58
DDX56-209ENST00000473924 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
DDX56-209ENST00000473924 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
DDX56-209ENST00000473924 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
DDX56-209ENST00000473924 NAIPQ13075 1403 aa18.66■□□□□ 0.58
DDX56-209ENST00000473924 ABCC3O15438 1527 aa18.65■□□□□ 0.58
DDX56-209ENST00000473924 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
DDX56-209ENST00000473924 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
DDX56-209ENST00000473924 CEP152O94986 1710 aa18.64■□□□□ 0.57
DDX56-209ENST00000473924 UNC13BO14795 1591 aa18.61■□□□□ 0.57
DDX56-209ENST00000473924 CAMSAP1Q5T5Y3 1602 aa18.6■□□□□ 0.57
DDX56-209ENST00000473924 PZPP20742 1482 aa18.59■□□□□ 0.57
DDX56-209ENST00000473924 NPATQ14207 1427 aa18.59■□□□□ 0.57
DDX56-209ENST00000473924 VWDEQ8N2E2 1590 aa18.59■□□□□ 0.57
DDX56-209ENST00000473924 NUP155O75694 1391 aa18.58■□□□□ 0.57
DDX56-209ENST00000473924 FBXO31Q5XUX0 539 aaPredicted RBP18.58■□□□□ 0.56
DDX56-209ENST00000473924 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.56
DDX56-209ENST00000473924 PREX1Q8TCU6 1659 aa18.57■□□□□ 0.56
DDX56-209ENST00000473924 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
DDX56-209ENST00000473924 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
DDX56-209ENST00000473924 UHRF1BP1Q6BDS2 1440 aa18.56■□□□□ 0.56
DDX56-209ENST00000473924 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
DDX56-209ENST00000473924 IQGAP3Q86VI3 1631 aa18.54■□□□□ 0.56
DDX56-209ENST00000473924 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
DDX56-209ENST00000473924 TET3O43151 1660 aa18.53■□□□□ 0.56
DDX56-209ENST00000473924 EFCAB6Q5THR3 1501 aa18.53■□□□□ 0.56
DDX56-209ENST00000473924 TNRQ92752 1358 aa18.53■□□□□ 0.56
DDX56-209ENST00000473924 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
DDX56-209ENST00000473924 LMTK3Q96Q04 1460 aa18.52■□□□□ 0.56
DDX56-209ENST00000473924 ERVK-7P63135 1459 aa18.51■□□□□ 0.55
DDX56-209ENST00000473924 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
DDX56-209ENST00000473924 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
DDX56-209ENST00000473924 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
DDX56-209ENST00000473924 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
DDX56-209ENST00000473924 HSPA2P54652 639 aa18.48■□□□□ 0.55
DDX56-209ENST00000473924 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
DDX56-209ENST00000473924 RAB3GAP2Q9H2M9 1393 aa18.47■□□□□ 0.55
DDX56-209ENST00000473924 E9PCH4 1651 aa18.45■□□□□ 0.54
DDX56-209ENST00000473924 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
DDX56-209ENST00000473924 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
DDX56-209ENST00000473924 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
DDX56-209ENST00000473924 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
DDX56-209ENST00000473924 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
DDX56-209ENST00000473924 NOS1P29475 1434 aa18.42■□□□□ 0.54
DDX56-209ENST00000473924 PKD2Q13563 968 aa18.41■□□□□ 0.54
DDX56-209ENST00000473924 SYNMO15061 1565 aa18.4■□□□□ 0.54
DDX56-209ENST00000473924 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
DDX56-209ENST00000473924 UGGT1Q9NYU2 1555 aa18.39■□□□□ 0.53
DDX56-209ENST00000473924 HRCP23327 699 aa18.39■□□□□ 0.53
DDX56-209ENST00000473924 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
DDX56-209ENST00000473924 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
DDX56-209ENST00000473924 IDI1Q13907 227 aa18.38■□□□□ 0.53
DDX56-209ENST00000473924 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
DDX56-209ENST00000473924 SPHKAPQ2M3C7 1700 aa18.36■□□□□ 0.53
DDX56-209ENST00000473924 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
DDX56-209ENST00000473924 FOXD1Q16676 465 aa18.34■□□□□ 0.53
DDX56-209ENST00000473924 PTPRTO14522 1441 aa18.33■□□□□ 0.53
DDX56-209ENST00000473924 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
DDX56-209ENST00000473924 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.52
DDX56-209ENST00000473924 PLA2R1Q13018 1463 aa18.33■□□□□ 0.52
DDX56-209ENST00000473924 NCKAP5LQ9HCH0 1330 aa18.3■□□□□ 0.52
DDX56-209ENST00000473924 ADGRB3O60242 1522 aa18.3■□□□□ 0.52
DDX56-209ENST00000473924 TRPM2O94759 1503 aa18.3■□□□□ 0.52
DDX56-209ENST00000473924 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
DDX56-209ENST00000473924 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
DDX56-209ENST00000473924 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
DDX56-209ENST00000473924 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
DDX56-209ENST00000473924 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
DDX56-209ENST00000473924 TMEM131LA2VDJ0 1609 aa18.26■□□□□ 0.51
DDX56-209ENST00000473924 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
DDX56-209ENST00000473924 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
DDX56-209ENST00000473924 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
DDX56-209ENST00000473924 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
DDX56-209ENST00000473924 SLIT1O75093 1534 aa18.24■□□□□ 0.51
DDX56-209ENST00000473924 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
DDX56-209ENST00000473924 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
DDX56-209ENST00000473924 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
DDX56-209ENST00000473924 ARHGAP23Q9P227 1491 aa18.23■□□□□ 0.51
DDX56-209ENST00000473924 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
DDX56-209ENST00000473924 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
DDX56-209ENST00000473924 KIF1BO60333 1816 aa18.23■□□□□ 0.51
DDX56-209ENST00000473924 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
DDX56-209ENST00000473924 LTKP29376 864 aa18.21■□□□□ 0.51
DDX56-209ENST00000473924 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
DDX56-209ENST00000473924 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms