RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CFAP74Q9C0B2 1584 aa15.81■□□□□ 0.12
SP140-208ENST00000473711 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
SP140-208ENST00000473711 ANKRD50Q9ULJ7 1429 aa15.79■□□□□ 0.12
SP140-208ENST00000473711 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
SP140-208ENST00000473711 RAPGEF3O95398 923 aa15.78■□□□□ 0.12
SP140-208ENST00000473711 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.12
SP140-208ENST00000473711 DENND4BO75064 1496 aaPredicted RBP15.77■□□□□ 0.11
SP140-208ENST00000473711 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
SP140-208ENST00000473711 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
SP140-208ENST00000473711 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
SP140-208ENST00000473711 ZNF518AQ6AHZ1 1483 aa15.75■□□□□ 0.11
SP140-208ENST00000473711 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
SP140-208ENST00000473711 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
SP140-208ENST00000473711 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
SP140-208ENST00000473711 POLA2Q14181 598 aa15.73■□□□□ 0.11
SP140-208ENST00000473711 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
SP140-208ENST00000473711 PLXNC1O60486 1568 aa15.72■□□□□ 0.11
SP140-208ENST00000473711 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
SP140-208ENST00000473711 ZFYVE16Q7Z3T8 1539 aa15.72■□□□□ 0.11
SP140-208ENST00000473711 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
SP140-208ENST00000473711 DUOX2Q9NRD8 1548 aa15.71■□□□□ 0.11
SP140-208ENST00000473711 NUP155O75694 1391 aa15.7■□□□□ 0.1
SP140-208ENST00000473711 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
SP140-208ENST00000473711 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
SP140-208ENST00000473711 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
SP140-208ENST00000473711 KDM5CP41229 1560 aa15.68■□□□□ 0.1
SP140-208ENST00000473711 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
SP140-208ENST00000473711 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
SP140-208ENST00000473711 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
SP140-208ENST00000473711 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
SP140-208ENST00000473711 PZPP20742 1482 aa15.66■□□□□ 0.1
SP140-208ENST00000473711 KIF3BO15066 747 aa15.65■□□□□ 0.1
SP140-208ENST00000473711 HECW2Q9P2P5 1572 aa15.65■□□□□ 0.1
SP140-208ENST00000473711 PKD2Q13563 968 aa15.64■□□□□ 0.09
SP140-208ENST00000473711 RICTORQ6R327 1708 aa15.64■□□□□ 0.09
SP140-208ENST00000473711 A2MP01023 1474 aa15.63■□□□□ 0.09
SP140-208ENST00000473711 COL17A1Q9UMD9 1497 aaPredicted RBP15.63■□□□□ 0.09
SP140-208ENST00000473711 FRMPD1Q5SYB0 1578 aa15.62■□□□□ 0.09
SP140-208ENST00000473711 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
SP140-208ENST00000473711 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
SP140-208ENST00000473711 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
SP140-208ENST00000473711 UNC13BO14795 1591 aa15.58■□□□□ 0.09
SP140-208ENST00000473711 ABCA6Q8N139 1617 aa15.58■□□□□ 0.09
SP140-208ENST00000473711 ANKRD30BQ9BXX2 1392 aa15.58■□□□□ 0.08
SP140-208ENST00000473711 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.08
SP140-208ENST00000473711 GGT6Q6P531 493 aa15.57■□□□□ 0.08
SP140-208ENST00000473711 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
SP140-208ENST00000473711 FAM135AQ9P2D6 1515 aa15.57■□□□□ 0.08
SP140-208ENST00000473711 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
SP140-208ENST00000473711 KANK1Q14678 1352 aa15.56■□□□□ 0.08
SP140-208ENST00000473711 ATP10AO60312 1499 aa15.55■□□□□ 0.08
SP140-208ENST00000473711 KDM4FA0A1W2PPD8 638 aa15.54■□□□□ 0.08
SP140-208ENST00000473711 EIF2AK4Q9P2K8 1649 aaKnown RBP15.54■□□□□ 0.08
SP140-208ENST00000473711 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
SP140-208ENST00000473711 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
SP140-208ENST00000473711 DEPDC5O75140 1603 aa15.5■□□□□ 0.07
SP140-208ENST00000473711 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
SP140-208ENST00000473711 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
SP140-208ENST00000473711 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
SP140-208ENST00000473711 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
SP140-208ENST00000473711 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
SP140-208ENST00000473711 RNF17Q9BXT8 1623 aaKnown RBP15.47■□□□□ 0.07
SP140-208ENST00000473711 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
SP140-208ENST00000473711 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
SP140-208ENST00000473711 PRDM15P57071 1507 aaPredicted RBP15.47■□□□□ 0.07
SP140-208ENST00000473711 MLECQ14165 292 aa15.46■□□□□ 0.07
SP140-208ENST00000473711 RPRD2Q5VT52 1461 aaKnown RBP15.46■□□□□ 0.06
SP140-208ENST00000473711 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
SP140-208ENST00000473711 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
SP140-208ENST00000473711 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
SP140-208ENST00000473711 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
SP140-208ENST00000473711 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
SP140-208ENST00000473711 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
SP140-208ENST00000473711 TET3O43151 1660 aa15.43■□□□□ 0.06
SP140-208ENST00000473711 AGLP35573 1532 aa15.43■□□□□ 0.06
SP140-208ENST00000473711 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
SP140-208ENST00000473711 E9PCH4 1651 aa15.41■□□□□ 0.06
SP140-208ENST00000473711 ABCC3O15438 1527 aa15.41■□□□□ 0.06
SP140-208ENST00000473711 CCDC144AA2RUR9 1427 aa15.41■□□□□ 0.06
SP140-208ENST00000473711 CEP152O94986 1710 aa15.4■□□□□ 0.06
SP140-208ENST00000473711 PTPRTO14522 1441 aa15.39■□□□□ 0.05
SP140-208ENST00000473711 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
SP140-208ENST00000473711 RGL3Q3MIN7 710 aa15.38■□□□□ 0.05
SP140-208ENST00000473711 EFCAB6Q5THR3 1501 aa15.38■□□□□ 0.05
SP140-208ENST00000473711 NPATQ14207 1427 aa15.36■□□□□ 0.05
SP140-208ENST00000473711 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
SP140-208ENST00000473711 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
SP140-208ENST00000473711 DCAF11Q8TEB1 546 aa15.34■□□□□ 0.05
SP140-208ENST00000473711 TRPM2O94759 1503 aa15.33■□□□□ 0.05
SP140-208ENST00000473711 CAMSAP1Q5T5Y3 1602 aa15.33■□□□□ 0.04
SP140-208ENST00000473711 NBPF8Q3BBV2 869 aa15.33■□□□□ 0.04
SP140-208ENST00000473711 ARHGAP31Q2M1Z3 1444 aa15.33■□□□□ 0.04
SP140-208ENST00000473711 SPHKAPQ2M3C7 1700 aa15.32■□□□□ 0.04
SP140-208ENST00000473711 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
SP140-208ENST00000473711 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
SP140-208ENST00000473711 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
SP140-208ENST00000473711 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
SP140-208ENST00000473711 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
SP140-208ENST00000473711 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
SP140-208ENST00000473711 CLTCL1P53675 1640 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms