RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 BCL2L12Q9HB09 334 aa10.03□□□□□ -0.8
RTF1-203ENST00000473214 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
RTF1-203ENST00000473214 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
RTF1-203ENST00000473214 TRIM26Q12899 539 aaPredicted RBP10.01□□□□□ -0.81
RTF1-203ENST00000473214 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
RTF1-203ENST00000473214 FOSBP53539 338 aa10□□□□□ -0.81
RTF1-203ENST00000473214 ANO8Q9HCE9 1232 aaPredicted RBP10□□□□□ -0.81
RTF1-203ENST00000473214 PDE4AP27815 886 aa9.99□□□□□ -0.81
RTF1-203ENST00000473214 BBXQ8WY36 941 aaPredicted RBP9.99□□□□□ -0.81
RTF1-203ENST00000473214 ZBED2Q9BTP6 218 aa9.98□□□□□ -0.81
RTF1-203ENST00000473214 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
RTF1-203ENST00000473214 A0A0G2JS52 829 aa9.96□□□□□ -0.82
RTF1-203ENST00000473214 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.82
RTF1-203ENST00000473214 PTPREP23469 700 aa9.96□□□□□ -0.82
RTF1-203ENST00000473214 WNT2BQ93097 391 aa9.96□□□□□ -0.82
RTF1-203ENST00000473214 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
RTF1-203ENST00000473214 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
RTF1-203ENST00000473214 EVI5O60447 810 aa9.94□□□□□ -0.82
RTF1-203ENST00000473214 MRPL50Q8N5N7 158 aaKnown RBP9.94□□□□□ -0.82
RTF1-203ENST00000473214 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
RTF1-203ENST00000473214 LARP6Q9BRS8 491 aaKnown RBP9.92□□□□□ -0.82
RTF1-203ENST00000473214 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
RTF1-203ENST00000473214 MFSD10Q14728 455 aa9.91□□□□□ -0.82
RTF1-203ENST00000473214 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
RTF1-203ENST00000473214 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
RTF1-203ENST00000473214 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.82
RTF1-203ENST00000473214 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
RTF1-203ENST00000473214 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
RTF1-203ENST00000473214 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
RTF1-203ENST00000473214 EMILIN3Q9NT22 766 aa9.86□□□□□ -0.83
RTF1-203ENST00000473214 HRCP23327 699 aa9.84□□□□□ -0.83
RTF1-203ENST00000473214 PCDHGA10Q9Y5H3 936 aa9.83□□□□□ -0.84
RTF1-203ENST00000473214 ITGBL1O95965 494 aaPredicted RBP9.82□□□□□ -0.84
RTF1-203ENST00000473214 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
RTF1-203ENST00000473214 PPP1R3GB7ZBB8 358 aa9.81□□□□□ -0.84
RTF1-203ENST00000473214 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
RTF1-203ENST00000473214 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
RTF1-203ENST00000473214 PROX2Q3B8N5 592 aa9.8□□□□□ -0.84
RTF1-203ENST00000473214 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
RTF1-203ENST00000473214 COL9A1P20849 921 aa9.79□□□□□ -0.84
RTF1-203ENST00000473214 FBXW7Q969H0 707 aa9.78□□□□□ -0.84
RTF1-203ENST00000473214 PHF14O94880 888 aa9.77□□□□□ -0.85
RTF1-203ENST00000473214 BCAMP50895 628 aa9.77□□□□□ -0.85
RTF1-203ENST00000473214 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
RTF1-203ENST00000473214 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
RTF1-203ENST00000473214 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
RTF1-203ENST00000473214 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
RTF1-203ENST00000473214 Q6ZNB5 142 aa9.73□□□□□ -0.85
RTF1-203ENST00000473214 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
RTF1-203ENST00000473214 ZFRQ96KR1 1074 aaKnown RBP9.72□□□□□ -0.85
RTF1-203ENST00000473214 KIAA1468Q9P260 1216 aa9.72□□□□□ -0.85
RTF1-203ENST00000473214 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
RTF1-203ENST00000473214 KCNC4Q03721 635 aa9.71□□□□□ -0.86
RTF1-203ENST00000473214 EPAS1Q99814 870 aa9.71□□□□□ -0.86
RTF1-203ENST00000473214 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
RTF1-203ENST00000473214 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
RTF1-203ENST00000473214 DPYSL4O14531 572 aa9.69□□□□□ -0.86
RTF1-203ENST00000473214 SEPT9Q9UHD8 586 aaPredicted RBP9.67□□□□□ -0.86
RTF1-203ENST00000473214 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
RTF1-203ENST00000473214 TRIM6-TRIM34B2RNG4 842 aa9.65□□□□□ -0.86
RTF1-203ENST00000473214 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
RTF1-203ENST00000473214 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
RTF1-203ENST00000473214 DDX12PQ92771 950 aa9.62□□□□□ -0.87
RTF1-203ENST00000473214 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
RTF1-203ENST00000473214 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
RTF1-203ENST00000473214 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
RTF1-203ENST00000473214 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
RTF1-203ENST00000473214 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
RTF1-203ENST00000473214 LCE2BO14633 110 aa9.6□□□□□ -0.87
RTF1-203ENST00000473214 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
RTF1-203ENST00000473214 GFRA3O60609 400 aa9.58□□□□□ -0.88
RTF1-203ENST00000473214 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
RTF1-203ENST00000473214 PDIA6Q15084 440 aa9.58□□□□□ -0.88
RTF1-203ENST00000473214 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
RTF1-203ENST00000473214 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
RTF1-203ENST00000473214 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
RTF1-203ENST00000473214 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
RTF1-203ENST00000473214 TSKSQ9UJT2 592 aa9.57□□□□□ -0.88
RTF1-203ENST00000473214 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
RTF1-203ENST00000473214 ARID3AQ99856 593 aa9.55□□□□□ -0.88
RTF1-203ENST00000473214 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
RTF1-203ENST00000473214 MAP3K7O43318 606 aa9.54□□□□□ -0.88
RTF1-203ENST00000473214 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
RTF1-203ENST00000473214 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
RTF1-203ENST00000473214 PPP4CP60510 307 aa9.52□□□□□ -0.89
RTF1-203ENST00000473214 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
RTF1-203ENST00000473214 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
RTF1-203ENST00000473214 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
RTF1-203ENST00000473214 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
RTF1-203ENST00000473214 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
RTF1-203ENST00000473214 PRSS12P56730 875 aa9.49□□□□□ -0.89
RTF1-203ENST00000473214 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
RTF1-203ENST00000473214 FAM198AQ9UFP1 575 aa9.49□□□□□ -0.89
RTF1-203ENST00000473214 NRG2O14511 850 aaPredicted RBP9.48□□□□□ -0.89
RTF1-203ENST00000473214 E2F4Q16254 413 aa9.48□□□□□ -0.89
RTF1-203ENST00000473214 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
RTF1-203ENST00000473214 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
RTF1-203ENST00000473214 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
RTF1-203ENST00000473214 SAMD7Q7Z3H4 446 aa9.47□□□□□ -0.89
RTF1-203ENST00000473214 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms