RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 FAM135AQ9P2D6 1515 aa39.95■■■■□ 3.99
HOXB3-207ENST00000472863 A2MP01023 1474 aa39.93■■■■□ 3.98
HOXB3-207ENST00000472863 KIF3BO15066 747 aa39.93■■■■□ 3.98
HOXB3-207ENST00000472863 ABCA6Q8N139 1617 aa39.93■■■■□ 3.98
HOXB3-207ENST00000472863 MAGI2Q86UL8 1455 aa39.91■■■■□ 3.98
HOXB3-207ENST00000472863 TRHP20396 242 aaPredicted RBP39.91■■■■□ 3.98
HOXB3-207ENST00000472863 COL17A1Q9UMD9 1497 aaPredicted RBP39.89■■■■□ 3.98
HOXB3-207ENST00000472863 YEATS2Q9ULM3 1422 aa39.87■■■■□ 3.97
HOXB3-207ENST00000472863 IQGAP3Q86VI3 1631 aa39.86■■■■□ 3.97
HOXB3-207ENST00000472863 EIF2AK4Q9P2K8 1649 aaKnown RBP39.85■■■■□ 3.97
HOXB3-207ENST00000472863 DIP2CQ9Y2E4 1556 aa39.84■■■■□ 3.97
HOXB3-207ENST00000472863 ZMYM4Q5VZL5 1548 aa39.84■■■■□ 3.97
HOXB3-207ENST00000472863 TIMELESSQ9UNS1 1208 aa39.83■■■■□ 3.97
HOXB3-207ENST00000472863 DEPDC5O75140 1603 aa39.82■■■■□ 3.97
HOXB3-207ENST00000472863 TONSLQ96HA7 1378 aa39.77■■■■□ 3.96
HOXB3-207ENST00000472863 MROH1Q8NDA8 1641 aa39.73■■■■□ 3.95
HOXB3-207ENST00000472863 KANK1Q14678 1352 aa39.71■■■■□ 3.95
HOXB3-207ENST00000472863 RPRD2Q5VT52 1461 aaKnown RBP39.7■■■■□ 3.95
HOXB3-207ENST00000472863 PRDM15P57071 1507 aaPredicted RBP39.7■■■■□ 3.95
HOXB3-207ENST00000472863 VWDEQ8N2E2 1590 aa39.69■■■■□ 3.94
HOXB3-207ENST00000472863 GGT6Q6P531 493 aa39.68■■■■□ 3.94
HOXB3-207ENST00000472863 PPP1R15AO75807 674 aaPredicted RBP39.67■■■■□ 3.94
HOXB3-207ENST00000472863 RNF17Q9BXT8 1623 aaKnown RBP39.67■■■■□ 3.94
HOXB3-207ENST00000472863 ATP10AO60312 1499 aa39.65■■■■□ 3.94
HOXB3-207ENST00000472863 BCORL1Q5H9F3 1711 aa39.64■■■■□ 3.94
HOXB3-207ENST00000472863 PLA2R1Q13018 1463 aa39.6■■■■□ 3.93
HOXB3-207ENST00000472863 L3MBTL2Q969R5 705 aa39.59■■■■□ 3.93
HOXB3-207ENST00000472863 E9PCH4 1651 aa39.58■■■■□ 3.93
HOXB3-207ENST00000472863 TET3O43151 1660 aa39.57■■■■□ 3.93
HOXB3-207ENST00000472863 CEP152O94986 1710 aa39.51■■■■□ 3.91
HOXB3-207ENST00000472863 WASHC2CQ9Y4E1 1318 aa39.5■■■■□ 3.91
HOXB3-207ENST00000472863 REREQ9P2R6 1566 aa39.49■■■■□ 3.91
HOXB3-207ENST00000472863 LMTK2Q8IWU2 1503 aa39.49■■■■□ 3.91
HOXB3-207ENST00000472863 ARHGEF40Q8TER5 1519 aa39.49■■■■□ 3.91
HOXB3-207ENST00000472863 CCDC144AA2RUR9 1427 aa39.48■■■■□ 3.91
HOXB3-207ENST00000472863 SIGLEC1Q9BZZ2 1709 aa39.44■■■■□ 3.9
HOXB3-207ENST00000472863 EFCAB6Q5THR3 1501 aa39.44■■■■□ 3.9
HOXB3-207ENST00000472863 ABCC3O15438 1527 aa39.43■■■■□ 3.9
HOXB3-207ENST00000472863 AGLP35573 1532 aa39.42■■■■□ 3.9
HOXB3-207ENST00000472863 PTPRTO14522 1441 aa39.42■■■■□ 3.9
HOXB3-207ENST00000472863 ZNF316A6NFI3 1004 aaPredicted RBP39.38■■■■□ 3.9
HOXB3-207ENST00000472863 SPHKAPQ2M3C7 1700 aa39.37■■■■□ 3.89
HOXB3-207ENST00000472863 TRPM2O94759 1503 aa39.34■■■■□ 3.89
HOXB3-207ENST00000472863 NPATQ14207 1427 aa39.34■■■■□ 3.89
HOXB3-207ENST00000472863 MLECQ14165 292 aa39.31■■■■□ 3.88
HOXB3-207ENST00000472863 CAMSAP1Q5T5Y3 1602 aa39.3■■■■□ 3.88
HOXB3-207ENST00000472863 NBPF8Q3BBV2 869 aa39.3■■■■□ 3.88
HOXB3-207ENST00000472863 RGL3Q3MIN7 710 aa39.3■■■■□ 3.88
HOXB3-207ENST00000472863 CFAP65Q6ZU64 1925 aaKnown RBP39.29■■■■□ 3.88
HOXB3-207ENST00000472863 ZC3H13Q5T200 1668 aaKnown RBP39.27■■■■□ 3.88
HOXB3-207ENST00000472863 CLTCL1P53675 1640 aa39.25■■■■□ 3.87
HOXB3-207ENST00000472863 DCAF11Q8TEB1 546 aa39.24■■■■□ 3.87
HOXB3-207ENST00000472863 PPP6R1Q9UPN7 881 aa39.24■■■■□ 3.87
HOXB3-207ENST00000472863 ARID4BQ4LE39 1312 aaPredicted RBP39.23■■■■□ 3.87
HOXB3-207ENST00000472863 KDM2AQ9Y2K7 1162 aa39.22■■■■□ 3.87
HOXB3-207ENST00000472863 UGGT1Q9NYU2 1555 aa39.21■■■■□ 3.87
HOXB3-207ENST00000472863 ARHGAP31Q2M1Z3 1444 aa39.2■■■■□ 3.87
HOXB3-207ENST00000472863 SPATA31E1Q6ZUB1 1445 aa39.18■■■■□ 3.86
HOXB3-207ENST00000472863 ZNF326Q5BKZ1 582 aaKnown RBP39.18■■■■□ 3.86
HOXB3-207ENST00000472863 NOS1P29475 1434 aa39.13■■■■□ 3.85
HOXB3-207ENST00000472863 CNTLNQ9NXG0 1405 aa39.12■■■■□ 3.85
HOXB3-207ENST00000472863 CLTCQ00610 1675 aaKnown RBP39.11■■■■□ 3.85
HOXB3-207ENST00000472863 UHRF1BP1Q6BDS2 1440 aa39.1■■■■□ 3.85
HOXB3-207ENST00000472863 FBXO31Q5XUX0 539 aaPredicted RBP39.07■■■■□ 3.85
HOXB3-207ENST00000472863 HIRIP3Q9BW71 556 aaPredicted RBP39.07■■■■□ 3.85
HOXB3-207ENST00000472863 SYNMO15061 1565 aa39.04■■■■□ 3.84
HOXB3-207ENST00000472863 ESF1Q9H501 851 aaKnown RBP39.04■■■■□ 3.84
HOXB3-207ENST00000472863 KIF1BO60333 1816 aa39.03■■■■□ 3.84
HOXB3-207ENST00000472863 PREX1Q8TCU6 1659 aa39.01■■■■□ 3.83
HOXB3-207ENST00000472863 CHGAP10645 457 aaKnown RBP38.99■■■■□ 3.83
HOXB3-207ENST00000472863 PRAG1Q86YV5 1406 aa38.98■■■■□ 3.83
HOXB3-207ENST00000472863 NEURL4Q96JN8 1562 aa38.97■■■■□ 3.83
HOXB3-207ENST00000472863 IDI1Q13907 227 aa38.96■■■■□ 3.83
HOXB3-207ENST00000472863 ZMYM3Q14202 1370 aa38.96■■■■□ 3.83
HOXB3-207ENST00000472863 PIK3C2BO00750 1634 aa38.95■■■■□ 3.83
HOXB3-207ENST00000472863 ERVK-7P63135 1459 aa38.94■■■■□ 3.82
HOXB3-207ENST00000472863 MROH2AA6NES4 1674 aa38.94■■■■□ 3.82
HOXB3-207ENST00000472863 SLC52A1Q9NWF4 448 aa38.93■■■■□ 3.82
HOXB3-207ENST00000472863 HSPA5P11021 654 aaKnown RBP38.92■■■■□ 3.82
HOXB3-207ENST00000472863 EIF4G2P78344 907 aaKnown RBP eCLIP38.91■■■■□ 3.824e-7■■■□□ 18.3
HOXB3-207ENST00000472863 RALGAPBQ86X10 1494 aa38.91■■■■□ 3.82
HOXB3-207ENST00000472863 ADGRB3O60242 1522 aa38.91■■■■□ 3.82
HOXB3-207ENST00000472863 DIEXFQ68CQ4 756 aaKnown RBP38.89■■■■□ 3.82
HOXB3-207ENST00000472863 STAC3Q96MF2 364 aa38.86■■■■□ 3.81
HOXB3-207ENST00000472863 SPATA31D1Q6ZQQ2 1576 aa38.84■■■■□ 3.81
HOXB3-207ENST00000472863 TRPM1Q7Z4N2 1603 aa38.83■■■■□ 3.81
HOXB3-207ENST00000472863 NBPF1Q3BBV0 1214 aa38.83■■■■□ 3.81
HOXB3-207ENST00000472863 CARD11Q9BXL7 1154 aa38.82■■■■□ 3.8
HOXB3-207ENST00000472863 ROCK2O75116 1388 aaKnown RBP38.8■■■■□ 3.8
HOXB3-207ENST00000472863 MADDQ8WXG6 1647 aa38.79■■■■□ 3.8
HOXB3-207ENST00000472863 IFT172Q9UG01 1749 aa38.77■■■■□ 3.8
HOXB3-207ENST00000472863 ADGRF5Q8IZF2 1346 aa38.77■■■■□ 3.8
HOXB3-207ENST00000472863 USP47Q96K76 1375 aa38.74■■■■□ 3.79
HOXB3-207ENST00000472863 CEBPAP49715 358 aaPredicted RBP38.74■■■■□ 3.79
HOXB3-207ENST00000472863 RPGRIP1LQ68CZ1 1315 aa38.74■■■■□ 3.79
HOXB3-207ENST00000472863 MYOM2P54296 1465 aa38.74■■■■□ 3.79
HOXB3-207ENST00000472863 TMEM131LA2VDJ0 1609 aa38.73■■■■□ 3.79
HOXB3-207ENST00000472863 FER1L4A9Z1Z3 1794 aa38.72■■■■□ 3.79
HOXB3-207ENST00000472863 MYO5BQ9ULV0 1848 aa38.71■■■■□ 3.79
HOXB3-207ENST00000472863 PPLO60437 1756 aa38.7■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms