RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 PRDM15P57071 1507 aaPredicted RBP17.34■□□□□ 0.37
FN1-217ENST00000471193 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
FN1-217ENST00000471193 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
FN1-217ENST00000471193 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
FN1-217ENST00000471193 VWDEQ8N2E2 1590 aa17.3■□□□□ 0.36
FN1-217ENST00000471193 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
FN1-217ENST00000471193 PZPP20742 1482 aa17.27■□□□□ 0.36
FN1-217ENST00000471193 KIF3BO15066 747 aa17.27■□□□□ 0.36
FN1-217ENST00000471193 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
FN1-217ENST00000471193 ZC3H13Q5T200 1668 aaKnown RBP17.25■□□□□ 0.35
FN1-217ENST00000471193 LMTK2Q8IWU2 1503 aa17.24■□□□□ 0.35
FN1-217ENST00000471193 NUP155O75694 1391 aa17.24■□□□□ 0.35
FN1-217ENST00000471193 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
FN1-217ENST00000471193 ABCC3O15438 1527 aa17.22■□□□□ 0.35
FN1-217ENST00000471193 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
FN1-217ENST00000471193 CEP152O94986 1710 aa17.21■□□□□ 0.35
FN1-217ENST00000471193 TET3O43151 1660 aa17.21■□□□□ 0.35
FN1-217ENST00000471193 KANK1Q14678 1352 aa17.21■□□□□ 0.35
FN1-217ENST00000471193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
FN1-217ENST00000471193 EFCAB6Q5THR3 1501 aa17.19■□□□□ 0.34
FN1-217ENST00000471193 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
FN1-217ENST00000471193 GGT6Q6P531 493 aa17.18■□□□□ 0.34
FN1-217ENST00000471193 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
FN1-217ENST00000471193 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
FN1-217ENST00000471193 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
FN1-217ENST00000471193 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
FN1-217ENST00000471193 E9PCH4 1651 aa17.15■□□□□ 0.34
FN1-217ENST00000471193 CLTCQ00610 1675 aaKnown RBP17.15■□□□□ 0.34
FN1-217ENST00000471193 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
FN1-217ENST00000471193 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
FN1-217ENST00000471193 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
FN1-217ENST00000471193 MLECQ14165 292 aa17.12■□□□□ 0.33
FN1-217ENST00000471193 ADAMTSL3P82987 1691 aa17.12■□□□□ 0.33
FN1-217ENST00000471193 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
FN1-217ENST00000471193 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
FN1-217ENST00000471193 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
FN1-217ENST00000471193 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
FN1-217ENST00000471193 NPATQ14207 1427 aa17.11■□□□□ 0.33
FN1-217ENST00000471193 PKD2Q13563 968 aa17.1■□□□□ 0.33
FN1-217ENST00000471193 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
FN1-217ENST00000471193 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
FN1-217ENST00000471193 TRPM2O94759 1503 aa17.07■□□□□ 0.32
FN1-217ENST00000471193 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
FN1-217ENST00000471193 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
FN1-217ENST00000471193 FOXD1Q16676 465 aa17.06■□□□□ 0.32
FN1-217ENST00000471193 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
FN1-217ENST00000471193 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
FN1-217ENST00000471193 PTPRTO14522 1441 aa17.05■□□□□ 0.32
FN1-217ENST00000471193 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
FN1-217ENST00000471193 SPATA31D1Q6ZQQ2 1576 aa17.04■□□□□ 0.32
FN1-217ENST00000471193 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
FN1-217ENST00000471193 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
FN1-217ENST00000471193 NOS1P29475 1434 aa17.04■□□□□ 0.32
FN1-217ENST00000471193 C3P01024 1663 aa17.04■□□□□ 0.32
FN1-217ENST00000471193 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
FN1-217ENST00000471193 SYNMO15061 1565 aa17.02■□□□□ 0.32
FN1-217ENST00000471193 CLTCL1P53675 1640 aa17■□□□□ 0.31
FN1-217ENST00000471193 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
FN1-217ENST00000471193 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
FN1-217ENST00000471193 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
FN1-217ENST00000471193 PTPRMP28827 1452 aa16.95■□□□□ 0.3
FN1-217ENST00000471193 FBXO31Q5XUX0 539 aaPredicted RBP16.94■□□□□ 0.3
FN1-217ENST00000471193 NEURL4Q96JN8 1562 aa16.94■□□□□ 0.3
FN1-217ENST00000471193 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
FN1-217ENST00000471193 TNRQ92752 1358 aa16.92■□□□□ 0.3
FN1-217ENST00000471193 ADGRB3O60242 1522 aa16.92■□□□□ 0.3
FN1-217ENST00000471193 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
FN1-217ENST00000471193 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
FN1-217ENST00000471193 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
FN1-217ENST00000471193 SPATA31E1Q6ZUB1 1445 aa16.89■□□□□ 0.29
FN1-217ENST00000471193 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
FN1-217ENST00000471193 KIF1BO60333 1816 aa16.89■□□□□ 0.29
FN1-217ENST00000471193 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
FN1-217ENST00000471193 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
FN1-217ENST00000471193 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
FN1-217ENST00000471193 TMEM131LA2VDJ0 1609 aa16.87■□□□□ 0.29
FN1-217ENST00000471193 KDM5AP29375 1690 aaKnown RBP16.87■□□□□ 0.29
FN1-217ENST00000471193 ZNF142P52746 1687 aaPredicted RBP16.86■□□□□ 0.29
FN1-217ENST00000471193 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
FN1-217ENST00000471193 IDI1Q13907 227 aa16.84■□□□□ 0.29
FN1-217ENST00000471193 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
FN1-217ENST00000471193 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
FN1-217ENST00000471193 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
FN1-217ENST00000471193 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
FN1-217ENST00000471193 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
FN1-217ENST00000471193 A2ML1A8K2U0 1454 aa16.82■□□□□ 0.28
FN1-217ENST00000471193 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
FN1-217ENST00000471193 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
FN1-217ENST00000471193 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
FN1-217ENST00000471193 PPLO60437 1756 aa16.79■□□□□ 0.28
FN1-217ENST00000471193 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
FN1-217ENST00000471193 L3MBTL2Q969R5 705 aa16.78■□□□□ 0.28
FN1-217ENST00000471193 MYOM2P54296 1465 aa16.78■□□□□ 0.28
FN1-217ENST00000471193 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
FN1-217ENST00000471193 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
FN1-217ENST00000471193 SETD1BQ9UPS6 1966 aaKnown RBP16.75■□□□□ 0.27
FN1-217ENST00000471193 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
FN1-217ENST00000471193 SLIT1O75093 1534 aa16.75■□□□□ 0.27
FN1-217ENST00000471193 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
FN1-217ENST00000471193 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms