RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 KIF14Q15058 1648 aa12.66□□□□□ -0.38
FDPS-209ENST00000471117 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
FDPS-209ENST00000471117 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
FDPS-209ENST00000471117 HRCP23327 699 aa12.62□□□□□ -0.39
FDPS-209ENST00000471117 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
FDPS-209ENST00000471117 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
FDPS-209ENST00000471117 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
FDPS-209ENST00000471117 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
FDPS-209ENST00000471117 ANKLE2Q86XL3 938 aa12.6□□□□□ -0.39
FDPS-209ENST00000471117 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
FDPS-209ENST00000471117 KIDINS220Q9ULH0 1771 aa12.59□□□□□ -0.39
FDPS-209ENST00000471117 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
FDPS-209ENST00000471117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.43e-6■□□□□ 10.4
FDPS-209ENST00000471117 NPHP4O75161 1426 aaPredicted RBP12.58□□□□□ -0.4
FDPS-209ENST00000471117 CDC42BPAQ5VT25 1732 aa12.58□□□□□ -0.4
FDPS-209ENST00000471117 SETBP1Q9Y6X0 1596 aa12.58□□□□□ -0.4
FDPS-209ENST00000471117 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
FDPS-209ENST00000471117 SYNMO15061 1565 aa12.57□□□□□ -0.4
FDPS-209ENST00000471117 FGD6Q6ZV73 1430 aa12.57□□□□□ -0.4
FDPS-209ENST00000471117 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
FDPS-209ENST00000471117 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 MIA2Q96PC5 1412 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 IQGAP1P46940 1657 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 RXRBP28702 533 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
FDPS-209ENST00000471117 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
FDPS-209ENST00000471117 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
FDPS-209ENST00000471117 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
FDPS-209ENST00000471117 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
FDPS-209ENST00000471117 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
FDPS-209ENST00000471117 GGT6Q6P531 493 aa12.54□□□□□ -0.4
FDPS-209ENST00000471117 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
FDPS-209ENST00000471117 ABCC1P33527 1531 aa12.52□□□□□ -0.4
FDPS-209ENST00000471117 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.41
FDPS-209ENST00000471117 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
FDPS-209ENST00000471117 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
FDPS-209ENST00000471117 MED14O60244 1454 aa12.51□□□□□ -0.41
FDPS-209ENST00000471117 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
FDPS-209ENST00000471117 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
FDPS-209ENST00000471117 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
FDPS-209ENST00000471117 LRP6O75581 1613 aa12.49□□□□□ -0.41
FDPS-209ENST00000471117 TNRQ92752 1358 aa12.49□□□□□ -0.41
FDPS-209ENST00000471117 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
FDPS-209ENST00000471117 JCADQ9P266 1359 aa12.48□□□□□ -0.41
FDPS-209ENST00000471117 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
FDPS-209ENST00000471117 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
FDPS-209ENST00000471117 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
FDPS-209ENST00000471117 ITGAEP38570 1179 aa12.47□□□□□ -0.41
FDPS-209ENST00000471117 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
FDPS-209ENST00000471117 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
FDPS-209ENST00000471117 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
FDPS-209ENST00000471117 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
FDPS-209ENST00000471117 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.41
FDPS-209ENST00000471117 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.42
FDPS-209ENST00000471117 SAMD9LQ8IVG5 1584 aa12.45□□□□□ -0.42
FDPS-209ENST00000471117 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
FDPS-209ENST00000471117 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
FDPS-209ENST00000471117 FOXD1Q16676 465 aa12.44□□□□□ -0.42
FDPS-209ENST00000471117 PLEKHH2Q8IVE3 1493 aa12.44□□□□□ -0.42
FDPS-209ENST00000471117 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
FDPS-209ENST00000471117 ZC3H13Q5T200 1668 aaKnown RBP12.43□□□□□ -0.42
FDPS-209ENST00000471117 RGS12O14924 1447 aa12.42□□□□□ -0.42
FDPS-209ENST00000471117 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
FDPS-209ENST00000471117 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
FDPS-209ENST00000471117 SPAG9O60271 1321 aaKnown RBP12.41□□□□□ -0.42
FDPS-209ENST00000471117 A2MP01023 1474 aa12.4□□□□□ -0.42
FDPS-209ENST00000471117 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
FDPS-209ENST00000471117 DAPK1P53355 1430 aa12.4□□□□□ -0.42
FDPS-209ENST00000471117 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
FDPS-209ENST00000471117 SYCP2Q9BX26 1530 aa12.4□□□□□ -0.42
FDPS-209ENST00000471117 ADGBQ8N7X0 1667 aa12.39□□□□□ -0.43
FDPS-209ENST00000471117 ABCC5O15440 1437 aa12.39□□□□□ -0.43
FDPS-209ENST00000471117 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
FDPS-209ENST00000471117 TMEM94Q12767 1356 aa12.39□□□□□ -0.43
FDPS-209ENST00000471117 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
FDPS-209ENST00000471117 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
FDPS-209ENST00000471117 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
FDPS-209ENST00000471117 AFF2P51816 1311 aa12.37□□□□□ -0.43
FDPS-209ENST00000471117 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
FDPS-209ENST00000471117 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
FDPS-209ENST00000471117 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
FDPS-209ENST00000471117 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
FDPS-209ENST00000471117 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
FDPS-209ENST00000471117 SETD5Q9C0A6 1442 aa12.36□□□□□ -0.43
FDPS-209ENST00000471117 PZPP20742 1482 aa12.35□□□□□ -0.43
FDPS-209ENST00000471117 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
FDPS-209ENST00000471117 TSPY4P0CV99 314 aa12.35□□□□□ -0.43
FDPS-209ENST00000471117 TSPY10P0CW01 314 aa12.35□□□□□ -0.43
FDPS-209ENST00000471117 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
FDPS-209ENST00000471117 ROCK1Q13464 1354 aa12.34□□□□□ -0.43
FDPS-209ENST00000471117 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
FDPS-209ENST00000471117 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
FDPS-209ENST00000471117 QTRT2Q9H974 415 aaKnown RBP12.34□□□□□ -0.43
FDPS-209ENST00000471117 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
FDPS-209ENST00000471117 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
FDPS-209ENST00000471117 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
FDPS-209ENST00000471117 RAB3GAP2Q9H2M9 1393 aa12.33□□□□□ -0.44
FDPS-209ENST00000471117 YY1P25490 414 aa12.33□□□□□ -0.44
FDPS-209ENST00000471117 INO80Q9ULG1 1556 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms