RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EP400Q96L91 3159 aa10.26□□□□□ -0.77
VARS-222ENST00000470953 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
VARS-222ENST00000470953 COL16A1Q07092 1604 aaPredicted RBP10.24□□□□□ -0.77
VARS-222ENST00000470953 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
VARS-222ENST00000470953 SPATA31A6Q5VVP1 1343 aa10.23□□□□□ -0.77
VARS-222ENST00000470953 EFCAB2Q5VUJ9 269 aa10.22□□□□□ -0.77
VARS-222ENST00000470953 AFF2P51816 1311 aa10.22□□□□□ -0.77
VARS-222ENST00000470953 NHSL1Q5SYE7 1610 aa10.22□□□□□ -0.77
VARS-222ENST00000470953 MYO5CQ9NQX4 1742 aa10.21□□□□□ -0.77
VARS-222ENST00000470953 ZC3H13Q5T200 1668 aaKnown RBP10.21□□□□□ -0.78
VARS-222ENST00000470953 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.78
VARS-222ENST00000470953 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
VARS-222ENST00000470953 SHPRHQ149N8 1683 aa10.18□□□□□ -0.78
VARS-222ENST00000470953 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
VARS-222ENST00000470953 MAP3K1Q13233 1512 aa10.17□□□□□ -0.78
VARS-222ENST00000470953 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
VARS-222ENST00000470953 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
VARS-222ENST00000470953 TNRQ92752 1358 aa10.16□□□□□ -0.78
VARS-222ENST00000470953 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
VARS-222ENST00000470953 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
VARS-222ENST00000470953 TMEM94Q12767 1356 aa10.15□□□□□ -0.78
VARS-222ENST00000470953 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.78
VARS-222ENST00000470953 CEP350Q5VT06 3117 aa10.15□□□□□ -0.78
VARS-222ENST00000470953 HRCP23327 699 aa10.15□□□□□ -0.78
VARS-222ENST00000470953 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.78
VARS-222ENST00000470953 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.78
VARS-222ENST00000470953 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
VARS-222ENST00000470953 NWD1Q149M9 1564 aa10.14□□□□□ -0.79
VARS-222ENST00000470953 SAMD9Q5K651 1589 aa10.14□□□□□ -0.79
VARS-222ENST00000470953 FAM135AQ9P2D6 1515 aa10.14□□□□□ -0.79
VARS-222ENST00000470953 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
VARS-222ENST00000470953 PRXQ9BXM0 1461 aa10.14□□□□□ -0.79
VARS-222ENST00000470953 BCL9LQ86UU0 1499 aa10.13□□□□□ -0.79
VARS-222ENST00000470953 SLC34A2O95436 690 aa10.13□□□□□ -0.79
VARS-222ENST00000470953 CCDC125Q86Z20 511 aa10.13□□□□□ -0.79
VARS-222ENST00000470953 GGT6Q6P531 493 aa10.12□□□□□ -0.79
VARS-222ENST00000470953 ATP7AQ04656 1500 aa10.12□□□□□ -0.79
VARS-222ENST00000470953 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
VARS-222ENST00000470953 DEFB132Q7Z7B7 95 aa10.11□□□□□ -0.79
VARS-222ENST00000470953 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
VARS-222ENST00000470953 KIF14Q15058 1648 aa10.1□□□□□ -0.79
VARS-222ENST00000470953 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
VARS-222ENST00000470953 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
VARS-222ENST00000470953 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
VARS-222ENST00000470953 DIP2AQ14689 1571 aa10.09□□□□□ -0.79
VARS-222ENST00000470953 C8orf37Q96NL8 207 aa10.08□□□□□ -0.8
VARS-222ENST00000470953 ADGBQ8N7X0 1667 aa10.07□□□□□ -0.8
VARS-222ENST00000470953 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
VARS-222ENST00000470953 TIAM1Q13009 1591 aa10.06□□□□□ -0.8
VARS-222ENST00000470953 CDC42BPBQ9Y5S2 1711 aa10.06□□□□□ -0.8
VARS-222ENST00000470953 AHDC1Q5TGY3 1603 aaPredicted RBP10.06□□□□□ -0.8
VARS-222ENST00000470953 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
VARS-222ENST00000470953 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
VARS-222ENST00000470953 PZPP20742 1482 aa10.05□□□□□ -0.8
VARS-222ENST00000470953 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
VARS-222ENST00000470953 A2MP01023 1474 aa10.04□□□□□ -0.8
VARS-222ENST00000470953 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
VARS-222ENST00000470953 PROSER2Q86WR7 435 aaPredicted RBP10.03□□□□□ -0.8
VARS-222ENST00000470953 MSH6P52701 1360 aa10.02□□□□□ -0.8
VARS-222ENST00000470953 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
VARS-222ENST00000470953 LTKP29376 864 aa10.01□□□□□ -0.81
VARS-222ENST00000470953 UTRNP46939 3433 aa10.01□□□□□ -0.81
VARS-222ENST00000470953 KDM5AP29375 1690 aaKnown RBP10□□□□□ -0.81
VARS-222ENST00000470953 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
VARS-222ENST00000470953 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
VARS-222ENST00000470953 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
VARS-222ENST00000470953 PREX2Q70Z35 1606 aa9.98□□□□□ -0.81
VARS-222ENST00000470953 CAPN15O75808 1086 aa9.98□□□□□ -0.81
VARS-222ENST00000470953 KCNA6P17658 529 aa9.98□□□□□ -0.81
VARS-222ENST00000470953 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
VARS-222ENST00000470953 ABCC3O15438 1527 aa9.97□□□□□ -0.81
VARS-222ENST00000470953 UBR1Q8IWV7 1749 aa9.97□□□□□ -0.81
VARS-222ENST00000470953 R3HDM1Q15032 1099 aaKnown RBP9.97□□□□□ -0.81
VARS-222ENST00000470953 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
VARS-222ENST00000470953 INO80Q9ULG1 1556 aaPredicted RBP9.97□□□□□ -0.81
VARS-222ENST00000470953 MAST1Q9Y2H9 1570 aa9.97□□□□□ -0.81
VARS-222ENST00000470953 TXNDC2Q86VQ3 553 aa9.96□□□□□ -0.82
VARS-222ENST00000470953 PCDH10Q9P2E7 1040 aa9.96□□□□□ -0.82
VARS-222ENST00000470953 USP21Q9UK80 565 aa9.96□□□□□ -0.82
VARS-222ENST00000470953 ATP1B4Q9UN42 357 aaPredicted RBP9.96□□□□□ -0.82
VARS-222ENST00000470953 RTEL1-TNFRSF6BF6WH68 1400 aa9.96□□□□□ -0.82
VARS-222ENST00000470953 ATRNO75882 1429 aa9.96□□□□□ -0.82
VARS-222ENST00000470953 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
VARS-222ENST00000470953 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
VARS-222ENST00000470953 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
VARS-222ENST00000470953 ARHGAP23Q9P227 1491 aa9.95□□□□□ -0.82
VARS-222ENST00000470953 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
VARS-222ENST00000470953 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
VARS-222ENST00000470953 SLIT1O75093 1534 aa9.93□□□□□ -0.82
VARS-222ENST00000470953 TROQ12816 1431 aaPredicted RBP9.92□□□□□ -0.82
VARS-222ENST00000470953 SETD5Q9C0A6 1442 aa9.92□□□□□ -0.82
VARS-222ENST00000470953 CHIC1Q5VXU3 224 aa9.92□□□□□ -0.82
VARS-222ENST00000470953 UNC13BO14795 1591 aa9.92□□□□□ -0.82
VARS-222ENST00000470953 PNPLA6Q8IY17 1366 aa9.91□□□□□ -0.82
VARS-222ENST00000470953 CSRNP3Q8WYN3 585 aa9.91□□□□□ -0.82
VARS-222ENST00000470953 BRINP3Q76B58 766 aa9.9□□□□□ -0.82
VARS-222ENST00000470953 SLC26A8Q96RN1 970 aa9.9□□□□□ -0.82
VARS-222ENST00000470953 BRWD3Q6RI45 1802 aa9.9□□□□□ -0.82
VARS-222ENST00000470953 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
VARS-222ENST00000470953 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 482.4 ms