RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
C1orf43-207ENST00000470180 PLA2R1Q13018 1463 aa24.19■■□□□ 1.46
C1orf43-207ENST00000470180 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
C1orf43-207ENST00000470180 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
C1orf43-207ENST00000470180 FAM69CQ0P6D2 419 aa24.19■■□□□ 1.46
C1orf43-207ENST00000470180 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
C1orf43-207ENST00000470180 EIF2AK4Q9P2K8 1649 aaKnown RBP24.16■■□□□ 1.46
C1orf43-207ENST00000470180 RAPGEF3O95398 923 aa24.15■■□□□ 1.46
C1orf43-207ENST00000470180 KIF3BO15066 747 aa24.15■■□□□ 1.46
C1orf43-207ENST00000470180 MIER1Q8N108 512 aa24.14■■□□□ 1.45
C1orf43-207ENST00000470180 HECW2Q9P2P5 1572 aa24.14■■□□□ 1.45
C1orf43-207ENST00000470180 VWDEQ8N2E2 1590 aa24.13■■□□□ 1.45
C1orf43-207ENST00000470180 A2MP01023 1474 aa24.12■■□□□ 1.45
C1orf43-207ENST00000470180 ATP10AO60312 1499 aa24.12■■□□□ 1.45
C1orf43-207ENST00000470180 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
C1orf43-207ENST00000470180 RICTORQ6R327 1708 aa24.11■■□□□ 1.45
C1orf43-207ENST00000470180 E9PCH4 1651 aa24.1■■□□□ 1.45
C1orf43-207ENST00000470180 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
C1orf43-207ENST00000470180 PPRC1Q5VV67 1664 aaKnown RBP24.08■■□□□ 1.45
C1orf43-207ENST00000470180 ABCA6Q8N139 1617 aa24.08■■□□□ 1.45
C1orf43-207ENST00000470180 FRMPD1Q5SYB0 1578 aa24.08■■□□□ 1.45
C1orf43-207ENST00000470180 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
C1orf43-207ENST00000470180 HSPA5P11021 654 aaKnown RBP24.07■■□□□ 1.44
C1orf43-207ENST00000470180 TET3O43151 1660 aa24.06■■□□□ 1.44
C1orf43-207ENST00000470180 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
C1orf43-207ENST00000470180 KANK1Q14678 1352 aa24.06■■□□□ 1.44
C1orf43-207ENST00000470180 UHRF1BP1Q6BDS2 1440 aa24.05■■□□□ 1.44
C1orf43-207ENST00000470180 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
C1orf43-207ENST00000470180 RNF17Q9BXT8 1623 aaKnown RBP24.03■■□□□ 1.44
C1orf43-207ENST00000470180 KIF13AQ9H1H9 1805 aa24.01■■□□□ 1.43
C1orf43-207ENST00000470180 PTPRTO14522 1441 aa24.01■■□□□ 1.43
C1orf43-207ENST00000470180 DIP2CQ9Y2E4 1556 aa24.01■■□□□ 1.43
C1orf43-207ENST00000470180 DDX10Q13206 875 aaKnown RBP24.01■■□□□ 1.43
C1orf43-207ENST00000470180 BCORL1Q5H9F3 1711 aa24■■□□□ 1.43
C1orf43-207ENST00000470180 DCAF11Q8TEB1 546 aa24■■□□□ 1.43
C1orf43-207ENST00000470180 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
C1orf43-207ENST00000470180 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
C1orf43-207ENST00000470180 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
C1orf43-207ENST00000470180 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
C1orf43-207ENST00000470180 RGL3Q3MIN7 710 aa23.97■■□□□ 1.43
C1orf43-207ENST00000470180 TRPM2O94759 1503 aa23.97■■□□□ 1.43
C1orf43-207ENST00000470180 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
C1orf43-207ENST00000470180 YEATS2Q9ULM3 1422 aa23.97■■□□□ 1.43
C1orf43-207ENST00000470180 CEP152O94986 1710 aa23.95■■□□□ 1.43
C1orf43-207ENST00000470180 ZMYM4Q5VZL5 1548 aa23.95■■□□□ 1.42
C1orf43-207ENST00000470180 EFCAB6Q5THR3 1501 aa23.93■■□□□ 1.42
C1orf43-207ENST00000470180 GGT6Q6P531 493 aa23.93■■□□□ 1.42
C1orf43-207ENST00000470180 RALGAPBQ86X10 1494 aa23.93■■□□□ 1.42
C1orf43-207ENST00000470180 CLTCL1P53675 1640 aa23.91■■□□□ 1.42
C1orf43-207ENST00000470180 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.42
C1orf43-207ENST00000470180 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.41
C1orf43-207ENST00000470180 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
C1orf43-207ENST00000470180 ABCC3O15438 1527 aa23.86■■□□□ 1.41
C1orf43-207ENST00000470180 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
C1orf43-207ENST00000470180 TRPM1Q7Z4N2 1603 aa23.85■■□□□ 1.41
C1orf43-207ENST00000470180 USP47Q96K76 1375 aa23.85■■□□□ 1.41
C1orf43-207ENST00000470180 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
C1orf43-207ENST00000470180 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.4
C1orf43-207ENST00000470180 NPATQ14207 1427 aa23.83■■□□□ 1.4
C1orf43-207ENST00000470180 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
C1orf43-207ENST00000470180 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
C1orf43-207ENST00000470180 CCDC7Q96M83 1385 aa23.8■■□□□ 1.4
C1orf43-207ENST00000470180 NEURL4Q96JN8 1562 aa23.79■■□□□ 1.4
C1orf43-207ENST00000470180 CAMSAP1Q5T5Y3 1602 aa23.79■■□□□ 1.4
C1orf43-207ENST00000470180 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
C1orf43-207ENST00000470180 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
C1orf43-207ENST00000470180 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
C1orf43-207ENST00000470180 REREQ9P2R6 1566 aa23.77■■□□□ 1.4
C1orf43-207ENST00000470180 GPRASP1Q5JY77 1395 aa23.77■■□□□ 1.39
C1orf43-207ENST00000470180 KIF1BO60333 1816 aa23.76■■□□□ 1.39
C1orf43-207ENST00000470180 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
C1orf43-207ENST00000470180 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
C1orf43-207ENST00000470180 SIGLEC1Q9BZZ2 1709 aa23.74■■□□□ 1.39
C1orf43-207ENST00000470180 ZC3H13Q5T200 1668 aaKnown RBP23.74■■□□□ 1.39
C1orf43-207ENST00000470180 ARHGAP31Q2M1Z3 1444 aa23.73■■□□□ 1.39
C1orf43-207ENST00000470180 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
C1orf43-207ENST00000470180 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
C1orf43-207ENST00000470180 AGLP35573 1532 aa23.72■■□□□ 1.39
C1orf43-207ENST00000470180 NOS1P29475 1434 aa23.72■■□□□ 1.39
C1orf43-207ENST00000470180 LAMC1P11047 1609 aa23.72■■□□□ 1.39
C1orf43-207ENST00000470180 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
C1orf43-207ENST00000470180 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
C1orf43-207ENST00000470180 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
C1orf43-207ENST00000470180 ANP32CO43423 234 aa23.68■■□□□ 1.38
C1orf43-207ENST00000470180 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
C1orf43-207ENST00000470180 SYNMO15061 1565 aa23.67■■□□□ 1.38
C1orf43-207ENST00000470180 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
C1orf43-207ENST00000470180 ARHGEF40Q8TER5 1519 aa23.67■■□□□ 1.38
C1orf43-207ENST00000470180 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
C1orf43-207ENST00000470180 PIK3C2BO00750 1634 aa23.65■■□□□ 1.38
C1orf43-207ENST00000470180 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
C1orf43-207ENST00000470180 MYOM2P54296 1465 aa23.63■■□□□ 1.37
C1orf43-207ENST00000470180 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
C1orf43-207ENST00000470180 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
C1orf43-207ENST00000470180 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
C1orf43-207ENST00000470180 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
C1orf43-207ENST00000470180 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
C1orf43-207ENST00000470180 CENPBP07199 599 aaPredicted RBP23.58■■□□□ 1.37
C1orf43-207ENST00000470180 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.37
C1orf43-207ENST00000470180 PPLO60437 1756 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms