RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 RRBP1Q9P2E9 1410 aaKnown RBP29.42■■■□□ 2.3
PCGF3-208ENST00000470161 WASHC2CQ9Y4E1 1318 aa29.39■■■□□ 2.29
PCGF3-208ENST00000470161 ADGRL2O95490 1459 aa29.38■■■□□ 2.29
PCGF3-208ENST00000470161 ERBINQ96RT1 1412 aa29.37■■■□□ 2.29
PCGF3-208ENST00000470161 ZMYM3Q14202 1370 aa29.36■■■□□ 2.29
PCGF3-208ENST00000470161 EIF2AK4Q9P2K8 1649 aaKnown RBP29.35■■■□□ 2.29
PCGF3-208ENST00000470161 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
PCGF3-208ENST00000470161 CLTCQ00610 1675 aaKnown RBP29.32■■■□□ 2.28
PCGF3-208ENST00000470161 ROCK1Q13464 1354 aa29.31■■■□□ 2.28
PCGF3-208ENST00000470161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.31■■■□□ 2.282e-7■■■□□ 14.8
PCGF3-208ENST00000470161 MROH2AA6NES4 1674 aa29.3■■■□□ 2.28
PCGF3-208ENST00000470161 C3P01024 1663 aa29.3■■■□□ 2.28
PCGF3-208ENST00000470161 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
PCGF3-208ENST00000470161 FAM135AQ9P2D6 1515 aa29.28■■■□□ 2.28
PCGF3-208ENST00000470161 ANKRD50Q9ULJ7 1429 aa29.28■■■□□ 2.28
PCGF3-208ENST00000470161 RNF17Q9BXT8 1623 aaKnown RBP29.28■■■□□ 2.28
PCGF3-208ENST00000470161 KANK1Q14678 1352 aa29.26■■■□□ 2.27
PCGF3-208ENST00000470161 NPATQ14207 1427 aa29.2■■■□□ 2.27
PCGF3-208ENST00000470161 UHRF1BP1Q6BDS2 1440 aa29.19■■■□□ 2.26
PCGF3-208ENST00000470161 SETD1BQ9UPS6 1966 aaKnown RBP29.19■■■□□ 2.26
PCGF3-208ENST00000470161 MROH1Q8NDA8 1641 aa29.18■■■□□ 2.26
PCGF3-208ENST00000470161 LMTK3Q96Q04 1460 aa29.17■■■□□ 2.26
PCGF3-208ENST00000470161 ABCC3O15438 1527 aa29.17■■■□□ 2.26
PCGF3-208ENST00000470161 ZC3H13Q5T200 1668 aaKnown RBP29.17■■■□□ 2.26
PCGF3-208ENST00000470161 PRDM15P57071 1507 aaPredicted RBP29.17■■■□□ 2.26
PCGF3-208ENST00000470161 PREX1Q8TCU6 1659 aa29.16■■■□□ 2.26
PCGF3-208ENST00000470161 DEPDC5O75140 1603 aa29.14■■■□□ 2.26
PCGF3-208ENST00000470161 PZPP20742 1482 aa29.14■■■□□ 2.25
PCGF3-208ENST00000470161 HSPA2P54652 639 aa29.13■■■□□ 2.25
PCGF3-208ENST00000470161 FBXO31Q5XUX0 539 aaPredicted RBP29.13■■■□□ 2.25
PCGF3-208ENST00000470161 CEP152O94986 1710 aa29.1■■■□□ 2.25
PCGF3-208ENST00000470161 TNRQ92752 1358 aa29.07■■■□□ 2.24
PCGF3-208ENST00000470161 CAMSAP1Q5T5Y3 1602 aa29.06■■■□□ 2.24
PCGF3-208ENST00000470161 NAIPQ13075 1403 aa29.04■■■□□ 2.24
PCGF3-208ENST00000470161 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
PCGF3-208ENST00000470161 NUP155O75694 1391 aa29.02■■■□□ 2.24
PCGF3-208ENST00000470161 VWDEQ8N2E2 1590 aa29.02■■■□□ 2.24
PCGF3-208ENST00000470161 LMTK2Q8IWU2 1503 aa29.01■■■□□ 2.24
PCGF3-208ENST00000470161 HFM1A2PYH4 1435 aa29.01■■■□□ 2.24
PCGF3-208ENST00000470161 UNC13BO14795 1591 aa29■■■□□ 2.23
PCGF3-208ENST00000470161 MYO3AQ8NEV4 1616 aa28.98■■■□□ 2.23
PCGF3-208ENST00000470161 ERVK-7P63135 1459 aa28.98■■■□□ 2.23
PCGF3-208ENST00000470161 GCC2Q8IWJ2 1684 aa28.96■■■□□ 2.23
PCGF3-208ENST00000470161 CFAP65Q6ZU64 1925 aaKnown RBP28.95■■■□□ 2.23
PCGF3-208ENST00000470161 SPATA31D1Q6ZQQ2 1576 aa28.95■■■□□ 2.22
PCGF3-208ENST00000470161 CEP170BQ9Y4F5 1589 aaPredicted RBP28.95■■■□□ 2.22
PCGF3-208ENST00000470161 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
PCGF3-208ENST00000470161 A2ML1A8K2U0 1454 aa28.94■■■□□ 2.22
PCGF3-208ENST00000470161 NLRP1Q9C000 1473 aa28.94■■■□□ 2.22
PCGF3-208ENST00000470161 EFCAB6Q5THR3 1501 aa28.94■■■□□ 2.22
PCGF3-208ENST00000470161 ZNF142P52746 1687 aaPredicted RBP28.9■■■□□ 2.22
PCGF3-208ENST00000470161 TET3O43151 1660 aa28.9■■■□□ 2.22
PCGF3-208ENST00000470161 THEMISQ8N1K5 641 aaPredicted RBP28.89■■■□□ 2.22
PCGF3-208ENST00000470161 IQGAP3Q86VI3 1631 aa28.89■■■□□ 2.22
PCGF3-208ENST00000470161 RPRD2Q5VT52 1461 aaKnown RBP28.89■■■□□ 2.22
PCGF3-208ENST00000470161 DMRT2Q9Y5R5 561 aa28.87■■■□□ 2.21
PCGF3-208ENST00000470161 STAG3Q9UJ98 1225 aa28.86■■■□□ 2.21
PCGF3-208ENST00000470161 UGGT1Q9NYU2 1555 aa28.85■■■□□ 2.21
PCGF3-208ENST00000470161 SLC52A1Q9NWF4 448 aa28.82■■■□□ 2.2
PCGF3-208ENST00000470161 NOS1P29475 1434 aa28.82■■■□□ 2.2
PCGF3-208ENST00000470161 SETD5Q9C0A6 1442 aa28.82■■■□□ 2.2
PCGF3-208ENST00000470161 PKD2Q13563 968 aa28.8■■■□□ 2.2
PCGF3-208ENST00000470161 ACIN1Q9UKV3 1341 aaKnown RBP28.8■■■□□ 2.2
PCGF3-208ENST00000470161 IDI1Q13907 227 aa28.8■■■□□ 2.2
PCGF3-208ENST00000470161 SLC4A1APQ9BWU0 796 aaKnown RBP28.8■■■□□ 2.2
PCGF3-208ENST00000470161 PLA2R1Q13018 1463 aa28.79■■■□□ 2.2
PCGF3-208ENST00000470161 NCKAP5LQ9HCH0 1330 aa28.79■■■□□ 2.2
PCGF3-208ENST00000470161 E9PCH4 1651 aa28.77■■■□□ 2.2
PCGF3-208ENST00000470161 ANKLE2Q86XL3 938 aa28.77■■■□□ 2.2
PCGF3-208ENST00000470161 STRCQ7RTU9 1775 aa28.76■■■□□ 2.19
PCGF3-208ENST00000470161 SYNMO15061 1565 aa28.75■■■□□ 2.19
PCGF3-208ENST00000470161 PIK3C2BO00750 1634 aa28.7■■■□□ 2.19
PCGF3-208ENST00000470161 RAB3GAP2Q9H2M9 1393 aa28.7■■■□□ 2.18
PCGF3-208ENST00000470161 CHGAP10645 457 aaKnown RBP28.7■■■□□ 2.18
PCGF3-208ENST00000470161 PTPRTO14522 1441 aa28.69■■■□□ 2.18
PCGF3-208ENST00000470161 UBR1Q8IWV7 1749 aa28.69■■■□□ 2.18
PCGF3-208ENST00000470161 HRCP23327 699 aa28.68■■■□□ 2.18
PCGF3-208ENST00000470161 EID1Q9Y6B2 187 aa28.68■■■□□ 2.18
PCGF3-208ENST00000470161 MPHOSPH9Q99550 1183 aa28.66■■■□□ 2.18
PCGF3-208ENST00000470161 TXNDC2Q86VQ3 553 aa28.64■■■□□ 2.18
PCGF3-208ENST00000470161 TMEM2Q9UHN6 1383 aa28.62■■■□□ 2.17
PCGF3-208ENST00000470161 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
PCGF3-208ENST00000470161 KDM5AP29375 1690 aaKnown RBP28.62■■■□□ 2.17
PCGF3-208ENST00000470161 SPHKAPQ2M3C7 1700 aa28.61■■■□□ 2.17
PCGF3-208ENST00000470161 POLR1AO95602 1720 aaPredicted RBP28.6■■■□□ 2.17
PCGF3-208ENST00000470161 HDGFP51858 240 aaKnown RBP28.6■■■□□ 2.17
PCGF3-208ENST00000470161 SLIT1O75093 1534 aa28.59■■■□□ 2.17
PCGF3-208ENST00000470161 LTKP29376 864 aa28.58■■■□□ 2.17
PCGF3-208ENST00000470161 FOXD1Q16676 465 aa28.58■■■□□ 2.17
PCGF3-208ENST00000470161 SCAF11Q99590 1463 aaKnown RBP28.58■■■□□ 2.17
PCGF3-208ENST00000470161 ARHGAP23Q9P227 1491 aa28.58■■■□□ 2.17
PCGF3-208ENST00000470161 NPHP4O75161 1426 aaPredicted RBP28.57■■■□□ 2.16
PCGF3-208ENST00000470161 MED14O60244 1454 aa28.54■■■□□ 2.16
PCGF3-208ENST00000470161 TRPM2O94759 1503 aa28.54■■■□□ 2.16
PCGF3-208ENST00000470161 PPP1R15AO75807 674 aaPredicted RBP28.54■■■□□ 2.16
PCGF3-208ENST00000470161 NEURL4Q96JN8 1562 aa28.54■■■□□ 2.16
PCGF3-208ENST00000470161 TMEM131LA2VDJ0 1609 aa28.53■■■□□ 2.16
PCGF3-208ENST00000470161 ZNF326Q5BKZ1 582 aaKnown RBP28.53■■■□□ 2.16
PCGF3-208ENST00000470161 BCANQ96GW7 911 aa28.52■■■□□ 2.16
PCGF3-208ENST00000470161 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms