RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.32
C19orf54-202ENST00000469741 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
C19orf54-202ENST00000469741 KIF15Q9NS87 1388 aa23.23■■□□□ 1.31
C19orf54-202ENST00000469741 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
C19orf54-202ENST00000469741 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
C19orf54-202ENST00000469741 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
C19orf54-202ENST00000469741 ANKRD30AQ9BXX3 1397 aa23.15■■□□□ 1.3
C19orf54-202ENST00000469741 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
C19orf54-202ENST00000469741 DUOX2Q9NRD8 1548 aa23.15■■□□□ 1.3
C19orf54-202ENST00000469741 MROH1Q8NDA8 1641 aa23.14■■□□□ 1.29
C19orf54-202ENST00000469741 C3P01024 1663 aa23.13■■□□□ 1.29
C19orf54-202ENST00000469741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.12■■□□□ 1.29
C19orf54-202ENST00000469741 ZMYM3Q14202 1370 aa23.11■■□□□ 1.29
C19orf54-202ENST00000469741 HFM1A2PYH4 1435 aa23.11■■□□□ 1.29
C19orf54-202ENST00000469741 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
C19orf54-202ENST00000469741 FBXO31Q5XUX0 539 aaPredicted RBP23.09■■□□□ 1.29
C19orf54-202ENST00000469741 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
C19orf54-202ENST00000469741 RNF17Q9BXT8 1623 aaKnown RBP23.07■■□□□ 1.28
C19orf54-202ENST00000469741 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
C19orf54-202ENST00000469741 ERBINQ96RT1 1412 aa23.06■■□□□ 1.28
C19orf54-202ENST00000469741 CFAP65Q6ZU64 1925 aaKnown RBP23.06■■□□□ 1.28
C19orf54-202ENST00000469741 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
C19orf54-202ENST00000469741 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
C19orf54-202ENST00000469741 CEP152O94986 1710 aa23.04■■□□□ 1.28
C19orf54-202ENST00000469741 HSPA2P54652 639 aa23.04■■□□□ 1.28
C19orf54-202ENST00000469741 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
C19orf54-202ENST00000469741 NAIPQ13075 1403 aa23.02■■□□□ 1.28
C19orf54-202ENST00000469741 ABCC3O15438 1527 aa23.01■■□□□ 1.27
C19orf54-202ENST00000469741 CNTLNQ9NXG0 1405 aa23■■□□□ 1.27
C19orf54-202ENST00000469741 LMTK3Q96Q04 1460 aa23■■□□□ 1.27
C19orf54-202ENST00000469741 MROH2AA6NES4 1674 aa23■■□□□ 1.27
C19orf54-202ENST00000469741 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
C19orf54-202ENST00000469741 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
C19orf54-202ENST00000469741 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
C19orf54-202ENST00000469741 PRDM15P57071 1507 aaPredicted RBP22.97■■□□□ 1.27
C19orf54-202ENST00000469741 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
C19orf54-202ENST00000469741 SETD1BQ9UPS6 1966 aaKnown RBP22.95■■□□□ 1.26
C19orf54-202ENST00000469741 GCC2Q8IWJ2 1684 aa22.94■■□□□ 1.26
C19orf54-202ENST00000469741 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
C19orf54-202ENST00000469741 CAMSAP1Q5T5Y3 1602 aa22.92■■□□□ 1.26
C19orf54-202ENST00000469741 PZPP20742 1482 aa22.91■■□□□ 1.26
C19orf54-202ENST00000469741 NPATQ14207 1427 aa22.89■■□□□ 1.25
C19orf54-202ENST00000469741 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
C19orf54-202ENST00000469741 UNC13BO14795 1591 aa22.88■■□□□ 1.25
C19orf54-202ENST00000469741 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
C19orf54-202ENST00000469741 ZC3H13Q5T200 1668 aaKnown RBP22.87■■□□□ 1.25
C19orf54-202ENST00000469741 NUP155O75694 1391 aa22.86■■□□□ 1.25
C19orf54-202ENST00000469741 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
C19orf54-202ENST00000469741 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
C19orf54-202ENST00000469741 KANK1Q14678 1352 aa22.83■■□□□ 1.25
C19orf54-202ENST00000469741 TNRQ92752 1358 aa22.83■■□□□ 1.25
C19orf54-202ENST00000469741 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.25
C19orf54-202ENST00000469741 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
C19orf54-202ENST00000469741 FAM135AQ9P2D6 1515 aa22.83■■□□□ 1.24
C19orf54-202ENST00000469741 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
C19orf54-202ENST00000469741 SPATA31D1Q6ZQQ2 1576 aa22.8■■□□□ 1.24
C19orf54-202ENST00000469741 EFCAB6Q5THR3 1501 aa22.8■■□□□ 1.24
C19orf54-202ENST00000469741 ARHGAP31Q2M1Z3 1444 aa22.79■■□□□ 1.24
C19orf54-202ENST00000469741 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
C19orf54-202ENST00000469741 E9PCH4 1651 aa22.78■■□□□ 1.24
C19orf54-202ENST00000469741 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
C19orf54-202ENST00000469741 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
C19orf54-202ENST00000469741 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
C19orf54-202ENST00000469741 SYNMO15061 1565 aa22.77■■□□□ 1.23
C19orf54-202ENST00000469741 CEP170BQ9Y4F5 1589 aaPredicted RBP22.77■■□□□ 1.23
C19orf54-202ENST00000469741 TET3O43151 1660 aa22.76■■□□□ 1.23
C19orf54-202ENST00000469741 FOXD1Q16676 465 aa22.75■■□□□ 1.23
C19orf54-202ENST00000469741 UGGT1Q9NYU2 1555 aa22.74■■□□□ 1.23
C19orf54-202ENST00000469741 IDI1Q13907 227 aa22.74■■□□□ 1.23
C19orf54-202ENST00000469741 NCKAP5LQ9HCH0 1330 aa22.73■■□□□ 1.23
C19orf54-202ENST00000469741 NOS1P29475 1434 aa22.73■■□□□ 1.23
C19orf54-202ENST00000469741 ZNF142P52746 1687 aaPredicted RBP22.72■■□□□ 1.23
C19orf54-202ENST00000469741 A2ML1A8K2U0 1454 aa22.72■■□□□ 1.23
C19orf54-202ENST00000469741 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
C19orf54-202ENST00000469741 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
C19orf54-202ENST00000469741 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
C19orf54-202ENST00000469741 PKD2Q13563 968 aa22.68■■□□□ 1.22
C19orf54-202ENST00000469741 NLRP1Q9C000 1473 aa22.66■■□□□ 1.22
C19orf54-202ENST00000469741 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
C19orf54-202ENST00000469741 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
C19orf54-202ENST00000469741 MIER1Q8N108 512 aa22.65■■□□□ 1.22
C19orf54-202ENST00000469741 MPHOSPH9Q99550 1183 aa22.65■■□□□ 1.22
C19orf54-202ENST00000469741 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
C19orf54-202ENST00000469741 PLA2R1Q13018 1463 aa22.64■■□□□ 1.22
C19orf54-202ENST00000469741 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.21
C19orf54-202ENST00000469741 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
C19orf54-202ENST00000469741 LTKP29376 864 aa22.62■■□□□ 1.21
C19orf54-202ENST00000469741 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
C19orf54-202ENST00000469741 PTPRTO14522 1441 aa22.58■■□□□ 1.2
C19orf54-202ENST00000469741 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.2
C19orf54-202ENST00000469741 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.2
C19orf54-202ENST00000469741 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
C19orf54-202ENST00000469741 NEURL4Q96JN8 1562 aa22.57■■□□□ 1.2
C19orf54-202ENST00000469741 SLC52A1Q9NWF4 448 aa22.55■■□□□ 1.2
C19orf54-202ENST00000469741 STAG3Q9UJ98 1225 aa22.55■■□□□ 1.2
C19orf54-202ENST00000469741 TMEM131LA2VDJ0 1609 aa22.54■■□□□ 1.2
C19orf54-202ENST00000469741 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
C19orf54-202ENST00000469741 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
C19orf54-202ENST00000469741 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
C19orf54-202ENST00000469741 ANKLE2Q86XL3 938 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms