RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 PZPP20742 1482 aa18.84■□□□□ 0.61
RUNX1-213ENST00000469087 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
RUNX1-213ENST00000469087 UNC13BO14795 1591 aa18.82■□□□□ 0.6
RUNX1-213ENST00000469087 FOXD1Q16676 465 aa18.81■□□□□ 0.6
RUNX1-213ENST00000469087 KDM5DQ9BY66 1539 aa18.81■□□□□ 0.6
RUNX1-213ENST00000469087 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
RUNX1-213ENST00000469087 ATP10AO60312 1499 aa18.8■□□□□ 0.6
RUNX1-213ENST00000469087 PKD2Q13563 968 aa18.78■□□□□ 0.6
RUNX1-213ENST00000469087 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
RUNX1-213ENST00000469087 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
RUNX1-213ENST00000469087 DEPDC5O75140 1603 aa18.77■□□□□ 0.59
RUNX1-213ENST00000469087 GGT6Q6P531 493 aa18.76■□□□□ 0.59
RUNX1-213ENST00000469087 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
RUNX1-213ENST00000469087 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
RUNX1-213ENST00000469087 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
RUNX1-213ENST00000469087 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
RUNX1-213ENST00000469087 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
RUNX1-213ENST00000469087 RNF17Q9BXT8 1623 aaKnown RBP18.72■□□□□ 0.59
RUNX1-213ENST00000469087 PRDM15P57071 1507 aaPredicted RBP18.71■□□□□ 0.59
RUNX1-213ENST00000469087 ARHGEF40Q8TER5 1519 aa18.71■□□□□ 0.59
RUNX1-213ENST00000469087 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
RUNX1-213ENST00000469087 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
RUNX1-213ENST00000469087 KANK1Q14678 1352 aa18.71■□□□□ 0.59
RUNX1-213ENST00000469087 SIGLEC1Q9BZZ2 1709 aa18.7■□□□□ 0.58
RUNX1-213ENST00000469087 AGLP35573 1532 aa18.68■□□□□ 0.58
RUNX1-213ENST00000469087 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
RUNX1-213ENST00000469087 TET3O43151 1660 aa18.64■□□□□ 0.57
RUNX1-213ENST00000469087 CEP152O94986 1710 aa18.64■□□□□ 0.57
RUNX1-213ENST00000469087 E9PCH4 1651 aa18.63■□□□□ 0.57
RUNX1-213ENST00000469087 LMTK2Q8IWU2 1503 aa18.63■□□□□ 0.57
RUNX1-213ENST00000469087 MLECQ14165 292 aa18.63■□□□□ 0.57
RUNX1-213ENST00000469087 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
RUNX1-213ENST00000469087 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
RUNX1-213ENST00000469087 ABCC3O15438 1527 aa18.61■□□□□ 0.57
RUNX1-213ENST00000469087 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
RUNX1-213ENST00000469087 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
RUNX1-213ENST00000469087 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
RUNX1-213ENST00000469087 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.57
RUNX1-213ENST00000469087 PTPRTO14522 1441 aa18.56■□□□□ 0.56
RUNX1-213ENST00000469087 NPATQ14207 1427 aa18.56■□□□□ 0.56
RUNX1-213ENST00000469087 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
RUNX1-213ENST00000469087 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
RUNX1-213ENST00000469087 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
RUNX1-213ENST00000469087 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
RUNX1-213ENST00000469087 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
RUNX1-213ENST00000469087 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
RUNX1-213ENST00000469087 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
RUNX1-213ENST00000469087 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.56
RUNX1-213ENST00000469087 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
RUNX1-213ENST00000469087 CLTCQ00610 1675 aaKnown RBP18.51■□□□□ 0.55
RUNX1-213ENST00000469087 TRPM2O94759 1503 aa18.5■□□□□ 0.55
RUNX1-213ENST00000469087 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
RUNX1-213ENST00000469087 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
RUNX1-213ENST00000469087 NOS1P29475 1434 aa18.46■□□□□ 0.55
RUNX1-213ENST00000469087 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
RUNX1-213ENST00000469087 RGL3Q3MIN7 710 aa18.46■□□□□ 0.55
RUNX1-213ENST00000469087 CLTCL1P53675 1640 aa18.46■□□□□ 0.55
RUNX1-213ENST00000469087 CNTLNQ9NXG0 1405 aa18.45■□□□□ 0.54
RUNX1-213ENST00000469087 UGGT1Q9NYU2 1555 aa18.45■□□□□ 0.54
RUNX1-213ENST00000469087 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
RUNX1-213ENST00000469087 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
RUNX1-213ENST00000469087 SYNMO15061 1565 aa18.42■□□□□ 0.54
RUNX1-213ENST00000469087 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
RUNX1-213ENST00000469087 IDI1Q13907 227 aa18.4■□□□□ 0.54
RUNX1-213ENST00000469087 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
RUNX1-213ENST00000469087 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
RUNX1-213ENST00000469087 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
RUNX1-213ENST00000469087 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
RUNX1-213ENST00000469087 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
RUNX1-213ENST00000469087 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
RUNX1-213ENST00000469087 KIF1BO60333 1816 aa18.38■□□□□ 0.53
RUNX1-213ENST00000469087 PIK3C2BO00750 1634 aa18.37■□□□□ 0.53
RUNX1-213ENST00000469087 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
RUNX1-213ENST00000469087 SPATA31D1Q6ZQQ2 1576 aa18.36■□□□□ 0.53
RUNX1-213ENST00000469087 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
RUNX1-213ENST00000469087 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
RUNX1-213ENST00000469087 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.53
RUNX1-213ENST00000469087 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.53
RUNX1-213ENST00000469087 MADDQ8WXG6 1647 aa18.33■□□□□ 0.52
RUNX1-213ENST00000469087 C3P01024 1663 aa18.33■□□□□ 0.52
RUNX1-213ENST00000469087 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
RUNX1-213ENST00000469087 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
RUNX1-213ENST00000469087 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
RUNX1-213ENST00000469087 TNRQ92752 1358 aa18.29■□□□□ 0.52
RUNX1-213ENST00000469087 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
RUNX1-213ENST00000469087 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
RUNX1-213ENST00000469087 TMEM131LA2VDJ0 1609 aa18.28■□□□□ 0.52
RUNX1-213ENST00000469087 MYO5BQ9ULV0 1848 aa18.27■□□□□ 0.51
RUNX1-213ENST00000469087 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.51
RUNX1-213ENST00000469087 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
RUNX1-213ENST00000469087 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
RUNX1-213ENST00000469087 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
RUNX1-213ENST00000469087 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
RUNX1-213ENST00000469087 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
RUNX1-213ENST00000469087 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
RUNX1-213ENST00000469087 PPLO60437 1756 aa18.23■□□□□ 0.51
RUNX1-213ENST00000469087 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
RUNX1-213ENST00000469087 NBPF1Q3BBV0 1214 aa18.22■□□□□ 0.51
RUNX1-213ENST00000469087 MYOM2P54296 1465 aa18.21■□□□□ 0.5
RUNX1-213ENST00000469087 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms