RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 WNT2BQ93097 391 aa11.89□□□□□ -0.51
SMC4-207ENST00000467263 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
SMC4-207ENST00000467263 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
SMC4-207ENST00000467263 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
SMC4-207ENST00000467263 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
SMC4-207ENST00000467263 GOLGA8CPA6NN73 597 aa11.85□□□□□ -0.51
SMC4-207ENST00000467263 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
SMC4-207ENST00000467263 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
SMC4-207ENST00000467263 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
SMC4-207ENST00000467263 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
SMC4-207ENST00000467263 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
SMC4-207ENST00000467263 EPAS1Q99814 870 aa11.81□□□□□ -0.52
SMC4-207ENST00000467263 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
SMC4-207ENST00000467263 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
SMC4-207ENST00000467263 BCAMP50895 628 aa11.79□□□□□ -0.52
SMC4-207ENST00000467263 PDIA6Q15084 440 aa11.79□□□□□ -0.52
SMC4-207ENST00000467263 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.79□□□□□ -0.52
SMC4-207ENST00000467263 SEPT9Q9UHD8 586 aaPredicted RBP11.79□□□□□ -0.52
SMC4-207ENST00000467263 NBR1Q14596 966 aa11.77□□□□□ -0.53
SMC4-207ENST00000467263 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
SMC4-207ENST00000467263 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
SMC4-207ENST00000467263 E2F4Q16254 413 aa11.74□□□□□ -0.53
SMC4-207ENST00000467263 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
SMC4-207ENST00000467263 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
SMC4-207ENST00000467263 MAP3K7O43318 606 aa11.72□□□□□ -0.53
SMC4-207ENST00000467263 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
SMC4-207ENST00000467263 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
SMC4-207ENST00000467263 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
SMC4-207ENST00000467263 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
SMC4-207ENST00000467263 ONECUT3O60422 494 aaPredicted RBP11.7□□□□□ -0.54
SMC4-207ENST00000467263 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
SMC4-207ENST00000467263 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
SMC4-207ENST00000467263 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
SMC4-207ENST00000467263 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
SMC4-207ENST00000467263 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
SMC4-207ENST00000467263 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
SMC4-207ENST00000467263 A0A0G2JS52 829 aa11.66□□□□□ -0.54
SMC4-207ENST00000467263 SMAPO00193 183 aa11.66□□□□□ -0.54
SMC4-207ENST00000467263 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
SMC4-207ENST00000467263 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
SMC4-207ENST00000467263 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
SMC4-207ENST00000467263 OSBPP22059 807 aa11.64□□□□□ -0.55
SMC4-207ENST00000467263 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
SMC4-207ENST00000467263 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
SMC4-207ENST00000467263 PRSS12P56730 875 aa11.61□□□□□ -0.55
SMC4-207ENST00000467263 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
SMC4-207ENST00000467263 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
SMC4-207ENST00000467263 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
SMC4-207ENST00000467263 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
SMC4-207ENST00000467263 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
SMC4-207ENST00000467263 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
SMC4-207ENST00000467263 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
SMC4-207ENST00000467263 TATDN2Q93075 761 aa11.54□□□□□ -0.56
SMC4-207ENST00000467263 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
SMC4-207ENST00000467263 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
SMC4-207ENST00000467263 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
SMC4-207ENST00000467263 RGS20O76081 388 aa11.51□□□□□ -0.57
SMC4-207ENST00000467263 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
SMC4-207ENST00000467263 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
SMC4-207ENST00000467263 CERKQ8TCT0 537 aa11.51□□□□□ -0.57
SMC4-207ENST00000467263 KCNC4Q03721 635 aa11.5□□□□□ -0.57
SMC4-207ENST00000467263 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
SMC4-207ENST00000467263 PPP4CP60510 307 aa11.48□□□□□ -0.57
SMC4-207ENST00000467263 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
SMC4-207ENST00000467263 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
SMC4-207ENST00000467263 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
SMC4-207ENST00000467263 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
SMC4-207ENST00000467263 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
SMC4-207ENST00000467263 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
SMC4-207ENST00000467263 RNF40O75150 1001 aa11.42□□□□□ -0.58
SMC4-207ENST00000467263 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
SMC4-207ENST00000467263 APLP1P51693 650 aa11.41□□□□□ -0.58
SMC4-207ENST00000467263 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
SMC4-207ENST00000467263 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
SMC4-207ENST00000467263 MTRQ99707 1265 aa11.41□□□□□ -0.58
SMC4-207ENST00000467263 EYA1Q99502 592 aa11.38□□□□□ -0.59
SMC4-207ENST00000467263 PTGDRQ13258 359 aa11.35□□□□□ -0.59
SMC4-207ENST00000467263 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
SMC4-207ENST00000467263 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
SMC4-207ENST00000467263 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
SMC4-207ENST00000467263 SEMA3EO15041 775 aa11.31□□□□□ -0.6
SMC4-207ENST00000467263 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
SMC4-207ENST00000467263 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
SMC4-207ENST00000467263 COPS2P61201 443 aa11.3□□□□□ -0.6
SMC4-207ENST00000467263 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
SMC4-207ENST00000467263 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
SMC4-207ENST00000467263 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
SMC4-207ENST00000467263 LCE2BO14633 110 aa11.26□□□□□ -0.61
SMC4-207ENST00000467263 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
SMC4-207ENST00000467263 Q6ZNB5 142 aa11.24□□□□□ -0.61
SMC4-207ENST00000467263 TMEM134Q9H6X4 195 aa11.23□□□□□ -0.61
SMC4-207ENST00000467263 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
SMC4-207ENST00000467263 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
SMC4-207ENST00000467263 DNAJB2P25686 324 aa11.22□□□□□ -0.61
SMC4-207ENST00000467263 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
SMC4-207ENST00000467263 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
SMC4-207ENST00000467263 GFRA3O60609 400 aa11.19□□□□□ -0.62
SMC4-207ENST00000467263 ZPR1O75312 459 aa11.19□□□□□ -0.62
SMC4-207ENST00000467263 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
SMC4-207ENST00000467263 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms