RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
PMF1-204ENST00000466489 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
PMF1-204ENST00000466489 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
PMF1-204ENST00000466489 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
PMF1-204ENST00000466489 GGT6Q6P531 493 aa14.88□□□□□ -0.03
PMF1-204ENST00000466489 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
PMF1-204ENST00000466489 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
PMF1-204ENST00000466489 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
PMF1-204ENST00000466489 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
PMF1-204ENST00000466489 KDM4FA0A1W2PPD8 638 aa14.86□□□□□ -0.03
PMF1-204ENST00000466489 MROH2AA6NES4 1674 aa14.86□□□□□ -0.03
PMF1-204ENST00000466489 KANK1Q14678 1352 aa14.85□□□□□ -0.03
PMF1-204ENST00000466489 CLTCQ00610 1675 aaKnown RBP14.84□□□□□ -0.03
PMF1-204ENST00000466489 KDM5DQ9BY66 1539 aa14.84□□□□□ -0.03
PMF1-204ENST00000466489 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
PMF1-204ENST00000466489 PRDM15P57071 1507 aaPredicted RBP14.83□□□□□ -0.04
PMF1-204ENST00000466489 PTPRMP28827 1452 aa14.82□□□□□ -0.04
PMF1-204ENST00000466489 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
PMF1-204ENST00000466489 HFM1A2PYH4 1435 aa14.81□□□□□ -0.04
PMF1-204ENST00000466489 C3P01024 1663 aa14.8□□□□□ -0.04
PMF1-204ENST00000466489 CEP152O94986 1710 aa14.8□□□□□ -0.04
PMF1-204ENST00000466489 UNC13BO14795 1591 aa14.79□□□□□ -0.04
PMF1-204ENST00000466489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
PMF1-204ENST00000466489 ACIN1Q9UKV3 1341 aaKnown RBP14.79□□□□□ -0.04
PMF1-204ENST00000466489 MROH1Q8NDA8 1641 aa14.78□□□□□ -0.04
PMF1-204ENST00000466489 NAIPQ13075 1403 aa14.78□□□□□ -0.04
PMF1-204ENST00000466489 SETD1BQ9UPS6 1966 aaKnown RBP14.78□□□□□ -0.04
PMF1-204ENST00000466489 ABCC3O15438 1527 aa14.77□□□□□ -0.04
PMF1-204ENST00000466489 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
PMF1-204ENST00000466489 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
PMF1-204ENST00000466489 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
PMF1-204ENST00000466489 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
PMF1-204ENST00000466489 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
PMF1-204ENST00000466489 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
PMF1-204ENST00000466489 PZPP20742 1482 aa14.73□□□□□ -0.05
PMF1-204ENST00000466489 TET3O43151 1660 aa14.73□□□□□ -0.05
PMF1-204ENST00000466489 NPATQ14207 1427 aa14.73□□□□□ -0.05
PMF1-204ENST00000466489 NUP155O75694 1391 aa14.73□□□□□ -0.05
PMF1-204ENST00000466489 LMTK2Q8IWU2 1503 aa14.72□□□□□ -0.05
PMF1-204ENST00000466489 PREX1Q8TCU6 1659 aa14.72□□□□□ -0.05
PMF1-204ENST00000466489 SETD5Q9C0A6 1442 aa14.72□□□□□ -0.05
PMF1-204ENST00000466489 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
PMF1-204ENST00000466489 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
PMF1-204ENST00000466489 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
PMF1-204ENST00000466489 TRIM52Q96A61 297 aa14.7□□□□□ -0.06
PMF1-204ENST00000466489 EFCAB6Q5THR3 1501 aa14.7□□□□□ -0.06
PMF1-204ENST00000466489 ARHGAP31Q2M1Z3 1444 aa14.69□□□□□ -0.06
PMF1-204ENST00000466489 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
PMF1-204ENST00000466489 UHRF1BP1Q6BDS2 1440 aa14.68□□□□□ -0.06
PMF1-204ENST00000466489 TNRQ92752 1358 aa14.66□□□□□ -0.06
PMF1-204ENST00000466489 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
PMF1-204ENST00000466489 SPATA31D1Q6ZQQ2 1576 aa14.65□□□□□ -0.06
PMF1-204ENST00000466489 E9PCH4 1651 aa14.65□□□□□ -0.06
PMF1-204ENST00000466489 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PMF1-204ENST00000466489 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
PMF1-204ENST00000466489 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
PMF1-204ENST00000466489 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
PMF1-204ENST00000466489 CCER1Q8TC90 406 aaPredicted RBP14.62□□□□□ -0.07
PMF1-204ENST00000466489 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PMF1-204ENST00000466489 CEP170BQ9Y4F5 1589 aaPredicted RBP14.61□□□□□ -0.07
PMF1-204ENST00000466489 FBXO31Q5XUX0 539 aaPredicted RBP14.61□□□□□ -0.07
PMF1-204ENST00000466489 SPHKAPQ2M3C7 1700 aa14.61□□□□□ -0.07
PMF1-204ENST00000466489 LMTK3Q96Q04 1460 aa14.6□□□□□ -0.07
PMF1-204ENST00000466489 A2ML1A8K2U0 1454 aa14.59□□□□□ -0.07
PMF1-204ENST00000466489 NOS1P29475 1434 aa14.58□□□□□ -0.08
PMF1-204ENST00000466489 PKD2Q13563 968 aa14.57□□□□□ -0.08
PMF1-204ENST00000466489 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
PMF1-204ENST00000466489 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
PMF1-204ENST00000466489 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
PMF1-204ENST00000466489 KDM5AP29375 1690 aaKnown RBP14.56□□□□□ -0.08
PMF1-204ENST00000466489 SYNMO15061 1565 aa14.56□□□□□ -0.08
PMF1-204ENST00000466489 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
PMF1-204ENST00000466489 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
PMF1-204ENST00000466489 TRPM2O94759 1503 aa14.54□□□□□ -0.08
PMF1-204ENST00000466489 PIK3C2BO00750 1634 aa14.54□□□□□ -0.08
PMF1-204ENST00000466489 UBR1Q8IWV7 1749 aa14.54□□□□□ -0.08
PMF1-204ENST00000466489 KIF1BO60333 1816 aa14.53□□□□□ -0.08
PMF1-204ENST00000466489 ADGRB3O60242 1522 aa14.52□□□□□ -0.08
PMF1-204ENST00000466489 PLA2R1Q13018 1463 aa14.51□□□□□ -0.09
PMF1-204ENST00000466489 PTPRTO14522 1441 aa14.51□□□□□ -0.09
PMF1-204ENST00000466489 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
PMF1-204ENST00000466489 POLR1AO95602 1720 aaPredicted RBP14.5□□□□□ -0.09
PMF1-204ENST00000466489 HSPA2P54652 639 aa14.5□□□□□ -0.09
PMF1-204ENST00000466489 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
PMF1-204ENST00000466489 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
PMF1-204ENST00000466489 IDI1Q13907 227 aa14.49□□□□□ -0.09
PMF1-204ENST00000466489 MYO5BQ9ULV0 1848 aa14.48□□□□□ -0.09
PMF1-204ENST00000466489 CHGAP10645 457 aaKnown RBP14.48□□□□□ -0.09
PMF1-204ENST00000466489 HDGFP51858 240 aaKnown RBP14.48□□□□□ -0.09
PMF1-204ENST00000466489 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
PMF1-204ENST00000466489 CLTCL1P53675 1640 aa14.48□□□□□ -0.09
PMF1-204ENST00000466489 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
PMF1-204ENST00000466489 TMEM131LA2VDJ0 1609 aa14.47□□□□□ -0.09
PMF1-204ENST00000466489 ANKLE2Q86XL3 938 aa14.46□□□□□ -0.09
PMF1-204ENST00000466489 FOXD1Q16676 465 aa14.45□□□□□ -0.1
PMF1-204ENST00000466489 SLIT1O75093 1534 aa14.45□□□□□ -0.1
PMF1-204ENST00000466489 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
PMF1-204ENST00000466489 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
PMF1-204ENST00000466489 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
PMF1-204ENST00000466489 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms