RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 B4GALNT3Q6L9W6 998 aa26.31■■□□□ 1.8
LIMS2-212ENST00000466410 SMG6Q86US8 1419 aaKnown RBP26.31■■□□□ 1.8
LIMS2-212ENST00000466410 PNISRQ8TF01 805 aaKnown RBP26.3■■□□□ 1.8
LIMS2-212ENST00000466410 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
LIMS2-212ENST00000466410 TMC1Q8TDI8 760 aa26.28■■□□□ 1.8
LIMS2-212ENST00000466410 TTC37Q6PGP7 1564 aa26.27■■□□□ 1.8
LIMS2-212ENST00000466410 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
LIMS2-212ENST00000466410 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
LIMS2-212ENST00000466410 CCDC144AA2RUR9 1427 aa26.25■■□□□ 1.79
LIMS2-212ENST00000466410 NUDCQ9Y266 331 aa26.25■■□□□ 1.79
LIMS2-212ENST00000466410 ABCC2Q92887 1545 aa26.25■■□□□ 1.79
LIMS2-212ENST00000466410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.23■■□□□ 1.79
LIMS2-212ENST00000466410 MSH5O43196 834 aa26.23■■□□□ 1.79
LIMS2-212ENST00000466410 RGL3Q3MIN7 710 aa26.23■■□□□ 1.79
LIMS2-212ENST00000466410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.79
LIMS2-212ENST00000466410 PRAG1Q86YV5 1406 aa26.23■■□□□ 1.79
LIMS2-212ENST00000466410 PLA2R1Q13018 1463 aa26.22■■□□□ 1.79
LIMS2-212ENST00000466410 MAST1Q9Y2H9 1570 aa26.21■■□□□ 1.79
LIMS2-212ENST00000466410 TRPM1Q7Z4N2 1603 aa26.21■■□□□ 1.79
LIMS2-212ENST00000466410 UNC13BO14795 1591 aa26.2■■□□□ 1.79
LIMS2-212ENST00000466410 E9PCH4 1651 aa26.2■■□□□ 1.79
LIMS2-212ENST00000466410 FANCIQ9NVI1 1328 aa26.2■■□□□ 1.78
LIMS2-212ENST00000466410 NBPF1Q3BBV0 1214 aa26.19■■□□□ 1.78
LIMS2-212ENST00000466410 MYBBP1AQ9BQG0 1328 aaKnown RBP26.18■■□□□ 1.78
LIMS2-212ENST00000466410 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
LIMS2-212ENST00000466410 RALBP1Q15311 655 aa26.17■■□□□ 1.78
LIMS2-212ENST00000466410 BRD4O60885 1362 aaPredicted RBP26.17■■□□□ 1.78
LIMS2-212ENST00000466410 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
LIMS2-212ENST00000466410 PLEKHH2Q8IVE3 1493 aa26.16■■□□□ 1.78
LIMS2-212ENST00000466410 KTN1Q86UP2 1357 aaKnown RBP26.16■■□□□ 1.78
LIMS2-212ENST00000466410 A2MP01023 1474 aa26.16■■□□□ 1.78
LIMS2-212ENST00000466410 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
LIMS2-212ENST00000466410 PLXNC1O60486 1568 aa26.13■■□□□ 1.77
LIMS2-212ENST00000466410 ZCCHC11Q5TAX3 1644 aaKnown RBP26.12■■□□□ 1.77
LIMS2-212ENST00000466410 IQGAP3Q86VI3 1631 aa26.12■■□□□ 1.77
LIMS2-212ENST00000466410 GPRASP1Q5JY77 1395 aa26.11■■□□□ 1.77
LIMS2-212ENST00000466410 DUOX2Q9NRD8 1548 aa26.07■■□□□ 1.76
LIMS2-212ENST00000466410 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
LIMS2-212ENST00000466410 PER1O15534 1290 aaPredicted RBP26.06■■□□□ 1.76
LIMS2-212ENST00000466410 UHRF1BP1LA0JNW5 1464 aa26.06■■□□□ 1.76
LIMS2-212ENST00000466410 TESK2Q96S53 571 aa26.05■■□□□ 1.76
LIMS2-212ENST00000466410 NLRP13Q86W25 1043 aa26.04■■□□□ 1.76
LIMS2-212ENST00000466410 PRDM15P57071 1507 aaPredicted RBP26.04■■□□□ 1.76
LIMS2-212ENST00000466410 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
LIMS2-212ENST00000466410 COL17A1Q9UMD9 1497 aaPredicted RBP26.03■■□□□ 1.76
LIMS2-212ENST00000466410 MAGI2Q86UL8 1455 aa26.03■■□□□ 1.76
LIMS2-212ENST00000466410 LAMC1P11047 1609 aa26.03■■□□□ 1.76
LIMS2-212ENST00000466410 PLCH2O75038 1416 aa26.02■■□□□ 1.76
LIMS2-212ENST00000466410 ATP10AO60312 1499 aa26.02■■□□□ 1.76
LIMS2-212ENST00000466410 CCDC136Q96JN2 1154 aa26.02■■□□□ 1.76
LIMS2-212ENST00000466410 ERBINQ96RT1 1412 aa26.01■■□□□ 1.76
LIMS2-212ENST00000466410 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
LIMS2-212ENST00000466410 SALL2Q9Y467 1007 aaPredicted RBP25.98■■□□□ 1.75
LIMS2-212ENST00000466410 EIF2AK4Q9P2K8 1649 aaKnown RBP25.98■■□□□ 1.75
LIMS2-212ENST00000466410 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
LIMS2-212ENST00000466410 CC2D1BQ5T0F9 858 aaKnown RBP25.96■■□□□ 1.75
LIMS2-212ENST00000466410 PANK3Q9H999 370 aa25.95■■□□□ 1.74
LIMS2-212ENST00000466410 ABCC1P33527 1531 aa25.94■■□□□ 1.74
LIMS2-212ENST00000466410 WASHC2CQ9Y4E1 1318 aa25.92■■□□□ 1.74
LIMS2-212ENST00000466410 TMF1P82094 1093 aa25.92■■□□□ 1.74
LIMS2-212ENST00000466410 ERICH6Q7L0X2 663 aa25.91■■□□□ 1.74
LIMS2-212ENST00000466410 RRP1P56182 461 aaKnown RBP25.9■■□□□ 1.74
LIMS2-212ENST00000466410 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.73
LIMS2-212ENST00000466410 RCAN3Q9UKA8 241 aa25.88■■□□□ 1.73
LIMS2-212ENST00000466410 AFAP1Q8N556 730 aa25.87■■□□□ 1.73
LIMS2-212ENST00000466410 SPAG9O60271 1321 aaKnown RBP25.86■■□□□ 1.73
LIMS2-212ENST00000466410 PDE3BQ13370 1112 aa25.86■■□□□ 1.73
LIMS2-212ENST00000466410 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
LIMS2-212ENST00000466410 EXOC6Q8TAG9 804 aa25.83■■□□□ 1.72
LIMS2-212ENST00000466410 MADDQ8WXG6 1647 aa25.82■■□□□ 1.72
LIMS2-212ENST00000466410 WDR7Q9Y4E6 1490 aa25.8■■□□□ 1.72
LIMS2-212ENST00000466410 BLMP54132 1417 aaPredicted RBP25.8■■□□□ 1.72
LIMS2-212ENST00000466410 ZFYVE16Q7Z3T8 1539 aa25.79■■□□□ 1.72
LIMS2-212ENST00000466410 RTEL1-TNFRSF6BF6WH68 1400 aa25.79■■□□□ 1.72
LIMS2-212ENST00000466410 TRPM2O94759 1503 aa25.79■■□□□ 1.72
LIMS2-212ENST00000466410 INSRP06213 1382 aa25.78■■□□□ 1.72
LIMS2-212ENST00000466410 IQGAP1P46940 1657 aa25.77■■□□□ 1.72
LIMS2-212ENST00000466410 OSCARQ8IYS5 282 aa25.76■■□□□ 1.71
LIMS2-212ENST00000466410 PTPRTO14522 1441 aa25.76■■□□□ 1.71
LIMS2-212ENST00000466410 SPHKAPQ2M3C7 1700 aa25.75■■□□□ 1.71
LIMS2-212ENST00000466410 ZMYM4Q5VZL5 1548 aa25.75■■□□□ 1.71
LIMS2-212ENST00000466410 CEP152O94986 1710 aa25.74■■□□□ 1.71
LIMS2-212ENST00000466410 CLTCL1P53675 1640 aa25.74■■□□□ 1.71
LIMS2-212ENST00000466410 ARAP3Q8WWN8 1544 aa25.74■■□□□ 1.71
LIMS2-212ENST00000466410 KNSTRNQ9Y448 316 aa25.72■■□□□ 1.71
LIMS2-212ENST00000466410 DEPDC5O75140 1603 aa25.72■■□□□ 1.71
LIMS2-212ENST00000466410 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
LIMS2-212ENST00000466410 SCAF11Q99590 1463 aaKnown RBP25.71■■□□□ 1.71
LIMS2-212ENST00000466410 ASXL2Q76L83 1435 aa25.7■■□□□ 1.71
LIMS2-212ENST00000466410 ABCA9Q8IUA7 1624 aa25.7■■□□□ 1.7
LIMS2-212ENST00000466410 SCAPERQ9BY12 1400 aa25.69■■□□□ 1.7
LIMS2-212ENST00000466410 TET3O43151 1660 aa25.69■■□□□ 1.7
LIMS2-212ENST00000466410 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
LIMS2-212ENST00000466410 NOP58Q9Y2X3 529 aaKnown RBP25.69■■□□□ 1.7
LIMS2-212ENST00000466410 PLIN1O60240 522 aa25.68■■□□□ 1.7
LIMS2-212ENST00000466410 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
LIMS2-212ENST00000466410 STAC3Q96MF2 364 aa25.68■■□□□ 1.7
LIMS2-212ENST00000466410 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
LIMS2-212ENST00000466410 KIF3BO15066 747 aa25.66■■□□□ 1.7
LIMS2-212ENST00000466410 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms