RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
SCAF11-205ENST00000465950 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
SCAF11-205ENST00000465950 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
SCAF11-205ENST00000465950 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
SCAF11-205ENST00000465950 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-205ENST00000465950 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
SCAF11-205ENST00000465950 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
SCAF11-205ENST00000465950 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
SCAF11-205ENST00000465950 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
SCAF11-205ENST00000465950 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
SCAF11-205ENST00000465950 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
SCAF11-205ENST00000465950 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
SCAF11-205ENST00000465950 TEFQ10587 303 aa12.14□□□□□ -0.47
SCAF11-205ENST00000465950 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-205ENST00000465950 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
SCAF11-205ENST00000465950 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
SCAF11-205ENST00000465950 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
SCAF11-205ENST00000465950 FRAT2O75474 233 aaPredicted RBP12.13□□□□□ -0.47
SCAF11-205ENST00000465950 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
SCAF11-205ENST00000465950 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
SCAF11-205ENST00000465950 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
SCAF11-205ENST00000465950 GORABQ5T7V8 394 aa12.12□□□□□ -0.47
SCAF11-205ENST00000465950 ERICH3Q5RHP9 1530 aa12.12□□□□□ -0.47
SCAF11-205ENST00000465950 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
SCAF11-205ENST00000465950 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-205ENST00000465950 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
SCAF11-205ENST00000465950 RRBP1Q9P2E9 1410 aaKnown RBP12.12□□□□□ -0.47
SCAF11-205ENST00000465950 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
SCAF11-205ENST00000465950 PRDM11Q9NQV5 511 aa12.11□□□□□ -0.47
SCAF11-205ENST00000465950 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
SCAF11-205ENST00000465950 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
SCAF11-205ENST00000465950 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
SCAF11-205ENST00000465950 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
SCAF11-205ENST00000465950 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
SCAF11-205ENST00000465950 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
SCAF11-205ENST00000465950 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
SCAF11-205ENST00000465950 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-205ENST00000465950 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
SCAF11-205ENST00000465950 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
SCAF11-205ENST00000465950 LMTK3Q96Q04 1460 aa12.09□□□□□ -0.47
SCAF11-205ENST00000465950 POLD1P28340 1107 aa12.09□□□□□ -0.47
SCAF11-205ENST00000465950 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-205ENST00000465950 HRCP23327 699 aa12.09□□□□□ -0.47
SCAF11-205ENST00000465950 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
SCAF11-205ENST00000465950 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
SCAF11-205ENST00000465950 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
SCAF11-205ENST00000465950 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-205ENST00000465950 RAPGEF3O95398 923 aa12.08□□□□□ -0.48
SCAF11-205ENST00000465950 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
SCAF11-205ENST00000465950 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
SCAF11-205ENST00000465950 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-205ENST00000465950 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
SCAF11-205ENST00000465950 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
SCAF11-205ENST00000465950 ADGRL1O94910 1474 aa12.06□□□□□ -0.48
SCAF11-205ENST00000465950 KCNJ4P48050 445 aa12.06□□□□□ -0.48
SCAF11-205ENST00000465950 NUTM2FA1L443 756 aa12.06□□□□□ -0.48
SCAF11-205ENST00000465950 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
SCAF11-205ENST00000465950 AFAP1Q8N556 730 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 CUL7Q14999 1698 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 ANP32EQ9BTT0 268 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 TOM1L2Q6ZVM7 507 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
SCAF11-205ENST00000465950 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
SCAF11-205ENST00000465950 CCAR1Q8IX12 1150 aaKnown RBP12.04□□□□□ -0.48
SCAF11-205ENST00000465950 KIF21BO75037 1637 aa12.04□□□□□ -0.48
SCAF11-205ENST00000465950 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-205ENST00000465950 FGD1P98174 961 aa12.03□□□□□ -0.48
SCAF11-205ENST00000465950 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-205ENST00000465950 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
SCAF11-205ENST00000465950 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
SCAF11-205ENST00000465950 TNRQ92752 1358 aa12.03□□□□□ -0.48
SCAF11-205ENST00000465950 STRN4Q9NRL3 753 aa12.02□□□□□ -0.48
SCAF11-205ENST00000465950 NLRP6P59044 892 aa12.02□□□□□ -0.49
SCAF11-205ENST00000465950 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
SCAF11-205ENST00000465950 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
SCAF11-205ENST00000465950 CHMP4CQ96CF2 233 aa12.01□□□□□ -0.49
SCAF11-205ENST00000465950 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-205ENST00000465950 DAPK1P53355 1430 aa12.01□□□□□ -0.49
SCAF11-205ENST00000465950 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
SCAF11-205ENST00000465950 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
SCAF11-205ENST00000465950 WDR97A6NE52 1622 aa12□□□□□ -0.49
SCAF11-205ENST00000465950 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
SCAF11-205ENST00000465950 HFM1A2PYH4 1435 aa12□□□□□ -0.49
SCAF11-205ENST00000465950 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
SCAF11-205ENST00000465950 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
SCAF11-205ENST00000465950 ZNF772Q68DY9 489 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-205ENST00000465950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
SCAF11-205ENST00000465950 BAG6P46379 1132 aa11.99□□□□□ -0.49
SCAF11-205ENST00000465950 ANKRD30BQ9BXX2 1392 aa11.99□□□□□ -0.49
SCAF11-205ENST00000465950 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-205ENST00000465950 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
SCAF11-205ENST00000465950 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
SCAF11-205ENST00000465950 ANP32BQ92688 251 aaKnown RBP11.98□□□□□ -0.49
SCAF11-205ENST00000465950 HMMRO75330 724 aa11.98□□□□□ -0.49
SCAF11-205ENST00000465950 VPS37DQ86XT2 251 aa11.98□□□□□ -0.49
SCAF11-205ENST00000465950 KIF6Q6ZMV9 814 aa11.97□□□□□ -0.49
SCAF11-205ENST00000465950 NPHP3Q7Z494 1330 aa11.97□□□□□ -0.49
SCAF11-205ENST00000465950 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
SCAF11-205ENST00000465950 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms