RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
TGFBR3-204ENST00000465892 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
TGFBR3-204ENST00000465892 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
TGFBR3-204ENST00000465892 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
TGFBR3-204ENST00000465892 RRAGDQ9NQL2 400 aaPredicted RBP18.14■□□□□ 0.49
TGFBR3-204ENST00000465892 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
TGFBR3-204ENST00000465892 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
TGFBR3-204ENST00000465892 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
TGFBR3-204ENST00000465892 KIF14Q15058 1648 aa18.12■□□□□ 0.49
TGFBR3-204ENST00000465892 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
TGFBR3-204ENST00000465892 PARD3Q8TEW0 1356 aa18.12■□□□□ 0.49
TGFBR3-204ENST00000465892 PANK3Q9H999 370 aa18.11■□□□□ 0.49
TGFBR3-204ENST00000465892 NUP155O75694 1391 aa18.1■□□□□ 0.49
TGFBR3-204ENST00000465892 SEC24BO95487 1268 aa18.1■□□□□ 0.49
TGFBR3-204ENST00000465892 RALGAPBQ86X10 1494 aa18.09■□□□□ 0.49
TGFBR3-204ENST00000465892 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
TGFBR3-204ENST00000465892 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
TGFBR3-204ENST00000465892 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
TGFBR3-204ENST00000465892 GZF1Q9H116 711 aaPredicted RBP18.05■□□□□ 0.48
TGFBR3-204ENST00000465892 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
TGFBR3-204ENST00000465892 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
TGFBR3-204ENST00000465892 BCAR3O75815 825 aa18.04■□□□□ 0.48
TGFBR3-204ENST00000465892 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
TGFBR3-204ENST00000465892 IGHDP01880 384 aa18.03■□□□□ 0.48
TGFBR3-204ENST00000465892 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
TGFBR3-204ENST00000465892 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
TGFBR3-204ENST00000465892 UHRF1BP1Q6BDS2 1440 aa18.03■□□□□ 0.48
TGFBR3-204ENST00000465892 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
TGFBR3-204ENST00000465892 USP19O94966 1318 aa18.02■□□□□ 0.48
TGFBR3-204ENST00000465892 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.47
TGFBR3-204ENST00000465892 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
TGFBR3-204ENST00000465892 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
TGFBR3-204ENST00000465892 GOLGA2Q08379 1002 aa18.01■□□□□ 0.47
TGFBR3-204ENST00000465892 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
TGFBR3-204ENST00000465892 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
TGFBR3-204ENST00000465892 DISP3Q9P2K9 1392 aa18■□□□□ 0.47
TGFBR3-204ENST00000465892 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
TGFBR3-204ENST00000465892 WDR62O43379 1518 aa18■□□□□ 0.47
TGFBR3-204ENST00000465892 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
TGFBR3-204ENST00000465892 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
TGFBR3-204ENST00000465892 CAMSAP2Q08AD1 1489 aa17.99■□□□□ 0.47
TGFBR3-204ENST00000465892 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
TGFBR3-204ENST00000465892 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
TGFBR3-204ENST00000465892 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
TGFBR3-204ENST00000465892 ZMYM4Q5VZL5 1548 aa17.96■□□□□ 0.46
TGFBR3-204ENST00000465892 E9PCH4 1651 aa17.95■□□□□ 0.46
TGFBR3-204ENST00000465892 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
TGFBR3-204ENST00000465892 BECN1Q14457 450 aa17.95■□□□□ 0.46
TGFBR3-204ENST00000465892 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
TGFBR3-204ENST00000465892 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
TGFBR3-204ENST00000465892 TESK2Q96S53 571 aa17.94■□□□□ 0.46
TGFBR3-204ENST00000465892 L1TD1Q5T7N2 865 aaKnown RBP17.93■□□□□ 0.46
TGFBR3-204ENST00000465892 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
TGFBR3-204ENST00000465892 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
TGFBR3-204ENST00000465892 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
TGFBR3-204ENST00000465892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.466e-8■■□□□ 12.3
TGFBR3-204ENST00000465892 NUP153P49790 1475 aaKnown RBP17.92■□□□□ 0.46
TGFBR3-204ENST00000465892 APAF1O14727 1248 aa17.92■□□□□ 0.46
TGFBR3-204ENST00000465892 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
TGFBR3-204ENST00000465892 SLFN5Q08AF3 891 aa17.92■□□□□ 0.46
TGFBR3-204ENST00000465892 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
TGFBR3-204ENST00000465892 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
TGFBR3-204ENST00000465892 GOLGA6L3A6NEY3 463 aa17.9■□□□□ 0.46
TGFBR3-204ENST00000465892 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
TGFBR3-204ENST00000465892 KNSTRNQ9Y448 316 aa17.9■□□□□ 0.46
TGFBR3-204ENST00000465892 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
TGFBR3-204ENST00000465892 TSPY4P0CV99 314 aa17.89■□□□□ 0.46
TGFBR3-204ENST00000465892 TSPY10P0CW01 314 aa17.89■□□□□ 0.46
TGFBR3-204ENST00000465892 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.461e-6■■■□□ 17.2
TGFBR3-204ENST00000465892 TMF1P82094 1093 aa17.89■□□□□ 0.45
TGFBR3-204ENST00000465892 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 ANTXR1Q9H6X2 564 aa17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
TGFBR3-204ENST00000465892 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
TGFBR3-204ENST00000465892 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
TGFBR3-204ENST00000465892 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
TGFBR3-204ENST00000465892 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
TGFBR3-204ENST00000465892 NEUROD2Q15784 382 aa17.85■□□□□ 0.45
TGFBR3-204ENST00000465892 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
TGFBR3-204ENST00000465892 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
TGFBR3-204ENST00000465892 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.45
TGFBR3-204ENST00000465892 COL17A1Q9UMD9 1497 aaPredicted RBP17.83■□□□□ 0.44
TGFBR3-204ENST00000465892 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
TGFBR3-204ENST00000465892 TROQ12816 1431 aaPredicted RBP17.83■□□□□ 0.44
TGFBR3-204ENST00000465892 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
TGFBR3-204ENST00000465892 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
TGFBR3-204ENST00000465892 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
TGFBR3-204ENST00000465892 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
TGFBR3-204ENST00000465892 MCM4P33991 863 aa17.82■□□□□ 0.44
TGFBR3-204ENST00000465892 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
TGFBR3-204ENST00000465892 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
TGFBR3-204ENST00000465892 CLCN1P35523 988 aa17.8■□□□□ 0.44
TGFBR3-204ENST00000465892 MAPK8IP3Q9UPT6 1336 aa17.8■□□□□ 0.44
TGFBR3-204ENST00000465892 TRAK2O60296 914 aa17.79■□□□□ 0.44
TGFBR3-204ENST00000465892 PLB1Q6P1J6 1458 aa17.79■□□□□ 0.44
TGFBR3-204ENST00000465892 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
TGFBR3-204ENST00000465892 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms