RNA–Protein interactions for RNA: ENST00000463603.5

ABCA2-209, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 3

Gene ABCA2, Length 655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-209ENST00000463603 KIF15Q9NS87 1388 aa23.2■■□□□ 1.3
ABCA2-209ENST00000463603 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
ABCA2-209ENST00000463603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.18■■□□□ 1.32e-12■■■■□ 26.6
ABCA2-209ENST00000463603 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
ABCA2-209ENST00000463603 ILDR1Q86SU0 546 aaPredicted RBP23.16■■□□□ 1.3
ABCA2-209ENST00000463603 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
ABCA2-209ENST00000463603 FAM135AQ9P2D6 1515 aa23.15■■□□□ 1.3
ABCA2-209ENST00000463603 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
ABCA2-209ENST00000463603 PREX1Q8TCU6 1659 aa23.15■■□□□ 1.3
ABCA2-209ENST00000463603 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.3
ABCA2-209ENST00000463603 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
ABCA2-209ENST00000463603 KDM5DQ9BY66 1539 aa23.12■■□□□ 1.29
ABCA2-209ENST00000463603 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
ABCA2-209ENST00000463603 PTPRKQ15262 1439 aa23.09■■□□□ 1.29
ABCA2-209ENST00000463603 NPATQ14207 1427 aa23.08■■□□□ 1.29
ABCA2-209ENST00000463603 ITGAEP38570 1179 aa23.08■■□□□ 1.29
ABCA2-209ENST00000463603 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
ABCA2-209ENST00000463603 UHRF1BP1Q6BDS2 1440 aa23.07■■□□□ 1.28
ABCA2-209ENST00000463603 MROH1Q8NDA8 1641 aa23.06■■□□□ 1.28
ABCA2-209ENST00000463603 ROCK1Q13464 1354 aa23.05■■□□□ 1.28
ABCA2-209ENST00000463603 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
ABCA2-209ENST00000463603 CEP152O94986 1710 aa23.05■■□□□ 1.28
ABCA2-209ENST00000463603 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
ABCA2-209ENST00000463603 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
ABCA2-209ENST00000463603 ABCC3O15438 1527 aa23.03■■□□□ 1.28
ABCA2-209ENST00000463603 HSPA2P54652 639 aa23.02■■□□□ 1.28
ABCA2-209ENST00000463603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.281e-7■□□□□ 10.1
ABCA2-209ENST00000463603 PRDM15P57071 1507 aaPredicted RBP23.02■■□□□ 1.28
ABCA2-209ENST00000463603 PZPP20742 1482 aa23.01■■□□□ 1.27
ABCA2-209ENST00000463603 KANK1Q14678 1352 aa23.01■■□□□ 1.27
ABCA2-209ENST00000463603 CAMSAP1Q5T5Y3 1602 aa22.98■■□□□ 1.27
ABCA2-209ENST00000463603 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
ABCA2-209ENST00000463603 MYO3AQ8NEV4 1616 aa22.96■■□□□ 1.27
ABCA2-209ENST00000463603 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
ABCA2-209ENST00000463603 TNRQ92752 1358 aa22.93■■□□□ 1.26
ABCA2-209ENST00000463603 ZNF142P52746 1687 aaPredicted RBP22.93■■□□□ 1.26
ABCA2-209ENST00000463603 FBXO41Q8TF61 875 aa22.92■■□□□ 1.26
ABCA2-209ENST00000463603 ARHGAP31Q2M1Z3 1444 aa22.91■■□□□ 1.26
ABCA2-209ENST00000463603 LMTK2Q8IWU2 1503 aa22.91■■□□□ 1.26
ABCA2-209ENST00000463603 CEP170BQ9Y4F5 1589 aaPredicted RBP22.9■■□□□ 1.26
ABCA2-209ENST00000463603 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.26
ABCA2-209ENST00000463603 STRCQ7RTU9 1775 aa22.89■■□□□ 1.25
ABCA2-209ENST00000463603 UNC13BO14795 1591 aa22.89■■□□□ 1.25
ABCA2-209ENST00000463603 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
ABCA2-209ENST00000463603 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
ABCA2-209ENST00000463603 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
ABCA2-209ENST00000463603 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
ABCA2-209ENST00000463603 TET3O43151 1660 aa22.84■■□□□ 1.25
ABCA2-209ENST00000463603 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
ABCA2-209ENST00000463603 NAIPQ13075 1403 aa22.82■■□□□ 1.24
ABCA2-209ENST00000463603 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
ABCA2-209ENST00000463603 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
ABCA2-209ENST00000463603 NUP155O75694 1391 aa22.8■■□□□ 1.24
ABCA2-209ENST00000463603 HFM1A2PYH4 1435 aa22.79■■□□□ 1.24
ABCA2-209ENST00000463603 UGGT1Q9NYU2 1555 aa22.79■■□□□ 1.24
ABCA2-209ENST00000463603 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
ABCA2-209ENST00000463603 RPRD2Q5VT52 1461 aaKnown RBP22.79■■□□□ 1.24
ABCA2-209ENST00000463603 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
ABCA2-209ENST00000463603 PKD2Q13563 968 aa22.76■■□□□ 1.23
ABCA2-209ENST00000463603 E9PCH4 1651 aa22.74■■□□□ 1.23
ABCA2-209ENST00000463603 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
ABCA2-209ENST00000463603 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
ABCA2-209ENST00000463603 PTPRTO14522 1441 aa22.74■■□□□ 1.23
ABCA2-209ENST00000463603 NOS1P29475 1434 aa22.74■■□□□ 1.23
ABCA2-209ENST00000463603 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
ABCA2-209ENST00000463603 POLR1AO95602 1720 aaPredicted RBP22.72■■□□□ 1.23
ABCA2-209ENST00000463603 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
ABCA2-209ENST00000463603 SYNMO15061 1565 aa22.71■■□□□ 1.23
ABCA2-209ENST00000463603 IDI1Q13907 227 aa22.7■■□□□ 1.22
ABCA2-209ENST00000463603 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
ABCA2-209ENST00000463603 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
ABCA2-209ENST00000463603 KDM5AP29375 1690 aaKnown RBP22.69■■□□□ 1.22
ABCA2-209ENST00000463603 TRIM52Q96A61 297 aa22.69■■□□□ 1.22
ABCA2-209ENST00000463603 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
ABCA2-209ENST00000463603 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
ABCA2-209ENST00000463603 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
ABCA2-209ENST00000463603 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
ABCA2-209ENST00000463603 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
ABCA2-209ENST00000463603 SLIT1O75093 1534 aa22.61■■□□□ 1.21
ABCA2-209ENST00000463603 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
ABCA2-209ENST00000463603 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
ABCA2-209ENST00000463603 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
ABCA2-209ENST00000463603 MED14O60244 1454 aa22.59■■□□□ 1.21
ABCA2-209ENST00000463603 ARHGAP23Q9P227 1491 aa22.59■■□□□ 1.21
ABCA2-209ENST00000463603 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.21
ABCA2-209ENST00000463603 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
ABCA2-209ENST00000463603 TMEM2Q9UHN6 1383 aa22.58■■□□□ 1.21
ABCA2-209ENST00000463603 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
ABCA2-209ENST00000463603 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
ABCA2-209ENST00000463603 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
ABCA2-209ENST00000463603 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
ABCA2-209ENST00000463603 LTKP29376 864 aa22.55■■□□□ 1.2
ABCA2-209ENST00000463603 LTBP4Q8N2S1 1624 aa22.55■■□□□ 1.2
ABCA2-209ENST00000463603 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
ABCA2-209ENST00000463603 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
ABCA2-209ENST00000463603 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
ABCA2-209ENST00000463603 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
ABCA2-209ENST00000463603 KIF1BO60333 1816 aa22.5■■□□□ 1.19
ABCA2-209ENST00000463603 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
ABCA2-209ENST00000463603 TRPM2O94759 1503 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms