RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
PTPRD-207ENST00000463477 ANKRD30AQ9BXX3 1397 aa14.56□□□□□ -0.08
PTPRD-207ENST00000463477 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
PTPRD-207ENST00000463477 KIF15Q9NS87 1388 aa14.55□□□□□ -0.08
PTPRD-207ENST00000463477 DUOX2Q9NRD8 1548 aa14.55□□□□□ -0.08
PTPRD-207ENST00000463477 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
PTPRD-207ENST00000463477 CROCC2H7BZ55 1655 aa14.53□□□□□ -0.08
PTPRD-207ENST00000463477 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
PTPRD-207ENST00000463477 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
PTPRD-207ENST00000463477 ADGRL2O95490 1459 aa14.52□□□□□ -0.08
PTPRD-207ENST00000463477 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
PTPRD-207ENST00000463477 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
PTPRD-207ENST00000463477 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
PTPRD-207ENST00000463477 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
PTPRD-207ENST00000463477 ROCK1Q13464 1354 aa14.49□□□□□ -0.09
PTPRD-207ENST00000463477 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
PTPRD-207ENST00000463477 LMTK3Q96Q04 1460 aa14.49□□□□□ -0.09
PTPRD-207ENST00000463477 NPATQ14207 1427 aa14.49□□□□□ -0.09
PTPRD-207ENST00000463477 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
PTPRD-207ENST00000463477 C3P01024 1663 aa14.49□□□□□ -0.09
PTPRD-207ENST00000463477 ITGAEP38570 1179 aa14.47□□□□□ -0.09
PTPRD-207ENST00000463477 CLTCQ00610 1675 aaKnown RBP14.47□□□□□ -0.09
PTPRD-207ENST00000463477 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
PTPRD-207ENST00000463477 KDM5DQ9BY66 1539 aa14.46□□□□□ -0.09
PTPRD-207ENST00000463477 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
PTPRD-207ENST00000463477 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.1
PTPRD-207ENST00000463477 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
PTPRD-207ENST00000463477 HSPA2P54652 639 aa14.44□□□□□ -0.1
PTPRD-207ENST00000463477 FBXO31Q5XUX0 539 aaPredicted RBP14.44□□□□□ -0.1
PTPRD-207ENST00000463477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTPRD-207ENST00000463477 SETD5Q9C0A6 1442 aa14.43□□□□□ -0.1
PTPRD-207ENST00000463477 MROH1Q8NDA8 1641 aa14.42□□□□□ -0.1
PTPRD-207ENST00000463477 PZPP20742 1482 aa14.42□□□□□ -0.1
PTPRD-207ENST00000463477 KANK1Q14678 1352 aa14.42□□□□□ -0.1
PTPRD-207ENST00000463477 PREX1Q8TCU6 1659 aa14.42□□□□□ -0.1
PTPRD-207ENST00000463477 ABCC3O15438 1527 aa14.41□□□□□ -0.1
PTPRD-207ENST00000463477 RAB3GAP2Q9H2M9 1393 aa14.41□□□□□ -0.1
PTPRD-207ENST00000463477 PRDM15P57071 1507 aaPredicted RBP14.41□□□□□ -0.1
PTPRD-207ENST00000463477 ARHGAP31Q2M1Z3 1444 aa14.4□□□□□ -0.1
PTPRD-207ENST00000463477 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
PTPRD-207ENST00000463477 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
PTPRD-207ENST00000463477 TNRQ92752 1358 aa14.38□□□□□ -0.11
PTPRD-207ENST00000463477 LMTK2Q8IWU2 1503 aa14.37□□□□□ -0.11
PTPRD-207ENST00000463477 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
PTPRD-207ENST00000463477 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
PTPRD-207ENST00000463477 NAIPQ13075 1403 aa14.34□□□□□ -0.11
PTPRD-207ENST00000463477 A2ML1A8K2U0 1454 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 ERVK-7P63135 1459 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 NLRP1Q9C000 1473 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 CEP152O94986 1710 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 SPATA31D1Q6ZQQ2 1576 aa14.33□□□□□ -0.12
PTPRD-207ENST00000463477 NUP155O75694 1391 aa14.32□□□□□ -0.12
PTPRD-207ENST00000463477 THEMISQ8N1K5 641 aaPredicted RBP14.32□□□□□ -0.12
PTPRD-207ENST00000463477 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
PTPRD-207ENST00000463477 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
PTPRD-207ENST00000463477 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
PTPRD-207ENST00000463477 PKD2Q13563 968 aa14.3□□□□□ -0.12
PTPRD-207ENST00000463477 UNC13BO14795 1591 aa14.3□□□□□ -0.12
PTPRD-207ENST00000463477 PLA2R1Q13018 1463 aa14.29□□□□□ -0.12
PTPRD-207ENST00000463477 RPRD2Q5VT52 1461 aaKnown RBP14.29□□□□□ -0.12
PTPRD-207ENST00000463477 ZNF142P52746 1687 aaPredicted RBP14.29□□□□□ -0.12
PTPRD-207ENST00000463477 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
PTPRD-207ENST00000463477 TIMELESSQ9UNS1 1208 aa14.29□□□□□ -0.12
PTPRD-207ENST00000463477 NOS1P29475 1434 aa14.28□□□□□ -0.12
PTPRD-207ENST00000463477 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
PTPRD-207ENST00000463477 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
PTPRD-207ENST00000463477 STRCQ7RTU9 1775 aa14.28□□□□□ -0.12
PTPRD-207ENST00000463477 EFCAB6Q5THR3 1501 aa14.27□□□□□ -0.12
PTPRD-207ENST00000463477 IDI1Q13907 227 aa14.27□□□□□ -0.12
PTPRD-207ENST00000463477 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.13
PTPRD-207ENST00000463477 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.13
PTPRD-207ENST00000463477 PTPRTO14522 1441 aa14.27□□□□□ -0.13
PTPRD-207ENST00000463477 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.13
PTPRD-207ENST00000463477 UGGT1Q9NYU2 1555 aa14.27□□□□□ -0.13
PTPRD-207ENST00000463477 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
PTPRD-207ENST00000463477 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
PTPRD-207ENST00000463477 TET3O43151 1660 aa14.25□□□□□ -0.13
PTPRD-207ENST00000463477 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
PTPRD-207ENST00000463477 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
PTPRD-207ENST00000463477 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
PTPRD-207ENST00000463477 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
PTPRD-207ENST00000463477 SYNMO15061 1565 aa14.2□□□□□ -0.14
PTPRD-207ENST00000463477 E9PCH4 1651 aa14.19□□□□□ -0.14
PTPRD-207ENST00000463477 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
PTPRD-207ENST00000463477 LTKP29376 864 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 NEUROD1Q13562 356 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 MIER1Q8N108 512 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 TMEM2Q9UHN6 1383 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 MED14O60244 1454 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
PTPRD-207ENST00000463477 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
PTPRD-207ENST00000463477 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
PTPRD-207ENST00000463477 SLIT1O75093 1534 aa14.17□□□□□ -0.14
PTPRD-207ENST00000463477 KDM5AP29375 1690 aaKnown RBP14.16□□□□□ -0.14
PTPRD-207ENST00000463477 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
PTPRD-207ENST00000463477 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
PTPRD-207ENST00000463477 CERKQ8TCT0 537 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms