RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
NUP58-206ENST00000463407 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
NUP58-206ENST00000463407 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
NUP58-206ENST00000463407 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
NUP58-206ENST00000463407 PANK3Q9H999 370 aa16.17■□□□□ 0.18
NUP58-206ENST00000463407 HDAC5Q9UQL6 1122 aa16.17■□□□□ 0.18
NUP58-206ENST00000463407 ATF3P18847 181 aa16.17■□□□□ 0.18
NUP58-206ENST00000463407 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
NUP58-206ENST00000463407 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
NUP58-206ENST00000463407 RWDD1Q9H446 243 aaPredicted RBP16.16■□□□□ 0.18
NUP58-206ENST00000463407 NOP58Q9Y2X3 529 aaKnown RBP16.16■□□□□ 0.18
NUP58-206ENST00000463407 CGNL1Q0VF96 1302 aa16.15■□□□□ 0.18
NUP58-206ENST00000463407 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
NUP58-206ENST00000463407 KIF15Q9NS87 1388 aa16.15■□□□□ 0.18
NUP58-206ENST00000463407 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
NUP58-206ENST00000463407 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
NUP58-206ENST00000463407 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
NUP58-206ENST00000463407 NLRP13Q86W25 1043 aa16.14■□□□□ 0.17
NUP58-206ENST00000463407 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
NUP58-206ENST00000463407 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
NUP58-206ENST00000463407 MYOM3Q5VTT5 1437 aa16.13■□□□□ 0.17
NUP58-206ENST00000463407 CUX1P39880 1505 aa16.13■□□□□ 0.17
NUP58-206ENST00000463407 NESP48681 1621 aa16.13■□□□□ 0.17
NUP58-206ENST00000463407 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
NUP58-206ENST00000463407 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
NUP58-206ENST00000463407 ARHGAP5Q13017 1502 aa16.12■□□□□ 0.17
NUP58-206ENST00000463407 HMMRO75330 724 aa16.12■□□□□ 0.17
NUP58-206ENST00000463407 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
NUP58-206ENST00000463407 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
NUP58-206ENST00000463407 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
NUP58-206ENST00000463407 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
NUP58-206ENST00000463407 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
NUP58-206ENST00000463407 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
NUP58-206ENST00000463407 TEFQ10587 303 aa16.1■□□□□ 0.17
NUP58-206ENST00000463407 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
NUP58-206ENST00000463407 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
NUP58-206ENST00000463407 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
NUP58-206ENST00000463407 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
NUP58-206ENST00000463407 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
NUP58-206ENST00000463407 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
NUP58-206ENST00000463407 USP47Q96K76 1375 aa16.07■□□□□ 0.16
NUP58-206ENST00000463407 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
NUP58-206ENST00000463407 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
NUP58-206ENST00000463407 GLIPR1L2Q4G1C9 344 aa16.06■□□□□ 0.16
NUP58-206ENST00000463407 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
NUP58-206ENST00000463407 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
NUP58-206ENST00000463407 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
NUP58-206ENST00000463407 KIF21BO75037 1637 aa16.05■□□□□ 0.16
NUP58-206ENST00000463407 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
NUP58-206ENST00000463407 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
NUP58-206ENST00000463407 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
NUP58-206ENST00000463407 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
NUP58-206ENST00000463407 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
NUP58-206ENST00000463407 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
NUP58-206ENST00000463407 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
NUP58-206ENST00000463407 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
NUP58-206ENST00000463407 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
NUP58-206ENST00000463407 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.15
NUP58-206ENST00000463407 TXNDC2Q86VQ3 553 aa16.01■□□□□ 0.15
NUP58-206ENST00000463407 CASKIN1Q8WXD9 1431 aa16.01■□□□□ 0.15
NUP58-206ENST00000463407 NRDCO43847 1150 aa16■□□□□ 0.15
NUP58-206ENST00000463407 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
NUP58-206ENST00000463407 KLHL34Q8N239 644 aa16■□□□□ 0.15
NUP58-206ENST00000463407 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
NUP58-206ENST00000463407 CFTRP13569 1480 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 TMEM132EQ6IEE7 984 aa15.99■□□□□ 0.15
NUP58-206ENST00000463407 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
NUP58-206ENST00000463407 RAPGEF4Q8WZA2 1011 aa15.98■□□□□ 0.15
NUP58-206ENST00000463407 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
NUP58-206ENST00000463407 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
NUP58-206ENST00000463407 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
NUP58-206ENST00000463407 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
NUP58-206ENST00000463407 ESCO1Q5FWF5 840 aa15.97■□□□□ 0.15
NUP58-206ENST00000463407 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
NUP58-206ENST00000463407 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
NUP58-206ENST00000463407 DRC7Q8IY82 874 aa15.96■□□□□ 0.14
NUP58-206ENST00000463407 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
NUP58-206ENST00000463407 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 FBXW7Q969H0 707 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 RBM19Q9Y4C8 960 aaKnown RBP15.94■□□□□ 0.14
NUP58-206ENST00000463407 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 RIPK4P57078 832 aa15.94■□□□□ 0.14
NUP58-206ENST00000463407 NLRP6P59044 892 aa15.93■□□□□ 0.14
NUP58-206ENST00000463407 HTATSF1O43719 755 aaKnown RBP15.93■□□□□ 0.14
NUP58-206ENST00000463407 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
NUP58-206ENST00000463407 THEMISQ8N1K5 641 aaPredicted RBP15.93■□□□□ 0.14
NUP58-206ENST00000463407 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
NUP58-206ENST00000463407 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
NUP58-206ENST00000463407 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
NUP58-206ENST00000463407 E9PSI1 815 aa15.92■□□□□ 0.14
NUP58-206ENST00000463407 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
NUP58-206ENST00000463407 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
NUP58-206ENST00000463407 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
NUP58-206ENST00000463407 HMOX1P09601 288 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms