RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
NUP58-206ENST00000463407 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
NUP58-206ENST00000463407 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.02
NUP58-206ENST00000463407 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
NUP58-206ENST00000463407 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
NUP58-206ENST00000463407 APLP2Q06481 763 aa20.37■□□□□ 0.85
NUP58-206ENST00000463407 FAM9AQ8IZU1 332 aaPredicted RBP20.36■□□□□ 0.85
NUP58-206ENST00000463407 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
NUP58-206ENST00000463407 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
NUP58-206ENST00000463407 ATP1B4Q9UN42 357 aaPredicted RBP19.93■□□□□ 0.78
NUP58-206ENST00000463407 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
NUP58-206ENST00000463407 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
NUP58-206ENST00000463407 PCGF6Q9BYE7 350 aa19.58■□□□□ 0.73
NUP58-206ENST00000463407 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
NUP58-206ENST00000463407 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
NUP58-206ENST00000463407 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.69
NUP58-206ENST00000463407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
NUP58-206ENST00000463407 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
NUP58-206ENST00000463407 ABCC9O60706 1549 aa19.3■□□□□ 0.68
NUP58-206ENST00000463407 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
NUP58-206ENST00000463407 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
NUP58-206ENST00000463407 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
NUP58-206ENST00000463407 ITGAEP38570 1179 aa19.04■□□□□ 0.64
NUP58-206ENST00000463407 CENPBP07199 599 aaPredicted RBP19.01■□□□□ 0.63
NUP58-206ENST00000463407 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
NUP58-206ENST00000463407 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
NUP58-206ENST00000463407 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
NUP58-206ENST00000463407 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
NUP58-206ENST00000463407 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
NUP58-206ENST00000463407 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
NUP58-206ENST00000463407 FBLN2P98095 1184 aa18.76■□□□□ 0.59
NUP58-206ENST00000463407 NEFLP07196 543 aa18.72■□□□□ 0.59
NUP58-206ENST00000463407 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
NUP58-206ENST00000463407 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
NUP58-206ENST00000463407 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
NUP58-206ENST00000463407 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
NUP58-206ENST00000463407 HRCP23327 699 aa18.42■□□□□ 0.54
NUP58-206ENST00000463407 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
NUP58-206ENST00000463407 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
NUP58-206ENST00000463407 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
NUP58-206ENST00000463407 NEUROD1Q13562 356 aa18.3■□□□□ 0.52
NUP58-206ENST00000463407 BCANQ96GW7 911 aa18.28■□□□□ 0.52
NUP58-206ENST00000463407 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
NUP58-206ENST00000463407 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
NUP58-206ENST00000463407 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
NUP58-206ENST00000463407 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
NUP58-206ENST00000463407 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
NUP58-206ENST00000463407 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
NUP58-206ENST00000463407 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
NUP58-206ENST00000463407 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
NUP58-206ENST00000463407 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
NUP58-206ENST00000463407 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
NUP58-206ENST00000463407 DIEXFQ68CQ4 756 aaKnown RBP18.07■□□□□ 0.48
NUP58-206ENST00000463407 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
NUP58-206ENST00000463407 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
NUP58-206ENST00000463407 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
NUP58-206ENST00000463407 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
NUP58-206ENST00000463407 CHGAP10645 457 aaKnown RBP17.93■□□□□ 0.46
NUP58-206ENST00000463407 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
NUP58-206ENST00000463407 ANP32CO43423 234 aa17.88■□□□□ 0.45
NUP58-206ENST00000463407 NEFMP07197 916 aa17.87■□□□□ 0.45
NUP58-206ENST00000463407 ZBTB47Q9UFB7 747 aaPredicted RBP17.83■□□□□ 0.44
NUP58-206ENST00000463407 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
NUP58-206ENST00000463407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.442e-6■■□□□ 12.4
NUP58-206ENST00000463407 CANXP27824 592 aaKnown RBP17.76■□□□□ 0.43
NUP58-206ENST00000463407 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
NUP58-206ENST00000463407 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
NUP58-206ENST00000463407 MYT1Q01538 1121 aa17.67■□□□□ 0.42
NUP58-206ENST00000463407 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
NUP58-206ENST00000463407 NACADO15069 1562 aa17.66■□□□□ 0.42
NUP58-206ENST00000463407 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
NUP58-206ENST00000463407 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
NUP58-206ENST00000463407 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
NUP58-206ENST00000463407 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
NUP58-206ENST00000463407 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
NUP58-206ENST00000463407 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
NUP58-206ENST00000463407 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
NUP58-206ENST00000463407 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
NUP58-206ENST00000463407 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
NUP58-206ENST00000463407 ARID4BQ4LE39 1312 aaPredicted RBP17.53■□□□□ 0.4
NUP58-206ENST00000463407 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
NUP58-206ENST00000463407 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
NUP58-206ENST00000463407 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
NUP58-206ENST00000463407 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
NUP58-206ENST00000463407 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
NUP58-206ENST00000463407 PPP1R15AO75807 674 aaPredicted RBP17.48■□□□□ 0.39
NUP58-206ENST00000463407 CLIP1P30622 1438 aa17.46■□□□□ 0.39
NUP58-206ENST00000463407 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
NUP58-206ENST00000463407 C14orf37Q86TY3 774 aa17.43■□□□□ 0.38
NUP58-206ENST00000463407 A0A0G2JS52 829 aa17.42■□□□□ 0.38
NUP58-206ENST00000463407 ZBTB7CA1YPR0 619 aa17.42■□□□□ 0.38
NUP58-206ENST00000463407 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
NUP58-206ENST00000463407 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.38
NUP58-206ENST00000463407 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
NUP58-206ENST00000463407 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
NUP58-206ENST00000463407 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
NUP58-206ENST00000463407 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
NUP58-206ENST00000463407 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
NUP58-206ENST00000463407 EEA1Q15075 1411 aa17.34■□□□□ 0.37
NUP58-206ENST00000463407 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms