RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 SAMD9Q5K651 1589 aa12.8□□□□□ -0.36
DDX39B-215ENST00000462256 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-215ENST00000462256 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-215ENST00000462256 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
DDX39B-215ENST00000462256 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
DDX39B-215ENST00000462256 NEFMP07197 916 aa12.79□□□□□ -0.36
DDX39B-215ENST00000462256 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
DDX39B-215ENST00000462256 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
DDX39B-215ENST00000462256 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
DDX39B-215ENST00000462256 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
DDX39B-215ENST00000462256 MEX3CQ5U5Q3 659 aaKnown RBP12.79□□□□□ -0.36
DDX39B-215ENST00000462256 ZCCHC11Q5TAX3 1644 aaKnown RBP12.79□□□□□ -0.36
DDX39B-215ENST00000462256 ADCY10Q96PN6 1610 aa12.78□□□□□ -0.36
DDX39B-215ENST00000462256 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
DDX39B-215ENST00000462256 SYCP2Q9BX26 1530 aa12.77□□□□□ -0.36
DDX39B-215ENST00000462256 IDI1Q13907 227 aa12.77□□□□□ -0.37
DDX39B-215ENST00000462256 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
DDX39B-215ENST00000462256 YEATS2Q9ULM3 1422 aa12.77□□□□□ -0.37
DDX39B-215ENST00000462256 TOM1O60784 492 aa12.76□□□□□ -0.37
DDX39B-215ENST00000462256 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
DDX39B-215ENST00000462256 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
DDX39B-215ENST00000462256 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
DDX39B-215ENST00000462256 ABCC5O15440 1437 aa12.75□□□□□ -0.37
DDX39B-215ENST00000462256 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
DDX39B-215ENST00000462256 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
DDX39B-215ENST00000462256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX39B-215ENST00000462256 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX39B-215ENST00000462256 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
DDX39B-215ENST00000462256 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
DDX39B-215ENST00000462256 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
DDX39B-215ENST00000462256 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
DDX39B-215ENST00000462256 SOX12O15370 315 aa12.7□□□□□ -0.38
DDX39B-215ENST00000462256 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
DDX39B-215ENST00000462256 ROCK1Q13464 1354 aa12.7□□□□□ -0.38
DDX39B-215ENST00000462256 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
DDX39B-215ENST00000462256 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-215ENST00000462256 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
DDX39B-215ENST00000462256 PSME1Q06323 249 aa12.68□□□□□ -0.38
DDX39B-215ENST00000462256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39B-215ENST00000462256 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-215ENST00000462256 HDGFL2Q7Z4V5 671 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-215ENST00000462256 RPGRIP1LQ68CZ1 1315 aa12.66□□□□□ -0.38
DDX39B-215ENST00000462256 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
DDX39B-215ENST00000462256 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
DDX39B-215ENST00000462256 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-215ENST00000462256 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-215ENST00000462256 TMF1P82094 1093 aa12.66□□□□□ -0.38
DDX39B-215ENST00000462256 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.38
DDX39B-215ENST00000462256 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
DDX39B-215ENST00000462256 PTPN23Q9H3S7 1636 aa12.65□□□□□ -0.39
DDX39B-215ENST00000462256 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
DDX39B-215ENST00000462256 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
DDX39B-215ENST00000462256 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
DDX39B-215ENST00000462256 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
DDX39B-215ENST00000462256 ATP7AQ04656 1500 aa12.64□□□□□ -0.39
DDX39B-215ENST00000462256 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
DDX39B-215ENST00000462256 LMTK3Q96Q04 1460 aa12.63□□□□□ -0.39
DDX39B-215ENST00000462256 MLH3Q9UHC1 1453 aa12.63□□□□□ -0.39
DDX39B-215ENST00000462256 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
DDX39B-215ENST00000462256 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
DDX39B-215ENST00000462256 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
DDX39B-215ENST00000462256 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
DDX39B-215ENST00000462256 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
DDX39B-215ENST00000462256 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
DDX39B-215ENST00000462256 DUOX2Q9NRD8 1548 aa12.63□□□□□ -0.39
DDX39B-215ENST00000462256 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
DDX39B-215ENST00000462256 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
DDX39B-215ENST00000462256 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
DDX39B-215ENST00000462256 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
DDX39B-215ENST00000462256 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
DDX39B-215ENST00000462256 CLSPNQ9HAW4 1339 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
DDX39B-215ENST00000462256 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
DDX39B-215ENST00000462256 GLI2P10070 1586 aa12.59□□□□□ -0.39
DDX39B-215ENST00000462256 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
DDX39B-215ENST00000462256 MSH6P52701 1360 aa12.59□□□□□ -0.39
DDX39B-215ENST00000462256 EVA1CP58658 441 aa12.59□□□□□ -0.39
DDX39B-215ENST00000462256 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.39
DDX39B-215ENST00000462256 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
DDX39B-215ENST00000462256 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
DDX39B-215ENST00000462256 NAIPQ13075 1403 aa12.56□□□□□ -0.4
DDX39B-215ENST00000462256 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
DDX39B-215ENST00000462256 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
DDX39B-215ENST00000462256 COL17A1Q9UMD9 1497 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-215ENST00000462256 ANP32CO43423 234 aa12.54□□□□□ -0.4
DDX39B-215ENST00000462256 ABCA9Q8IUA7 1624 aa12.54□□□□□ -0.4
DDX39B-215ENST00000462256 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-215ENST00000462256 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-215ENST00000462256 ABCC1P33527 1531 aa12.53□□□□□ -0.4
DDX39B-215ENST00000462256 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
DDX39B-215ENST00000462256 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.4
DDX39B-215ENST00000462256 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.4
DDX39B-215ENST00000462256 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
DDX39B-215ENST00000462256 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
DDX39B-215ENST00000462256 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
DDX39B-215ENST00000462256 KCNA6P17658 529 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms