RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.73e-7■■■□□ 19.2
LMBR1-215ENST00000461603 LHX6Q9UPM6 363 aa10.67□□□□□ -0.7
LMBR1-215ENST00000461603 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
LMBR1-215ENST00000461603 FAM205CA6NFA0 338 aa10.65□□□□□ -0.7
LMBR1-215ENST00000461603 ZNF687Q8N1G0 1237 aa10.65□□□□□ -0.7
LMBR1-215ENST00000461603 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
LMBR1-215ENST00000461603 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
LMBR1-215ENST00000461603 PBX2P40425 430 aa10.64□□□□□ -0.71
LMBR1-215ENST00000461603 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
LMBR1-215ENST00000461603 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
LMBR1-215ENST00000461603 PHF14O94880 888 aa10.63□□□□□ -0.71
LMBR1-215ENST00000461603 FOSBP53539 338 aa10.63□□□□□ -0.71
LMBR1-215ENST00000461603 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
LMBR1-215ENST00000461603 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
LMBR1-215ENST00000461603 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
LMBR1-215ENST00000461603 EPAS1Q99814 870 aa10.62□□□□□ -0.71
LMBR1-215ENST00000461603 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
LMBR1-215ENST00000461603 CYB5RLQ6IPT4 315 aa10.58□□□□□ -0.72
LMBR1-215ENST00000461603 WIZO95785 1651 aa10.57□□□□□ -0.72
LMBR1-215ENST00000461603 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
LMBR1-215ENST00000461603 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
LMBR1-215ENST00000461603 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
LMBR1-215ENST00000461603 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
LMBR1-215ENST00000461603 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
LMBR1-215ENST00000461603 CDAN1Q8IWY9 1227 aa10.56□□□□□ -0.72
LMBR1-215ENST00000461603 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
LMBR1-215ENST00000461603 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
LMBR1-215ENST00000461603 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
LMBR1-215ENST00000461603 CFTRP13569 1480 aa10.54□□□□□ -0.72
LMBR1-215ENST00000461603 ARHGAP33O14559 1287 aa10.53□□□□□ -0.72
LMBR1-215ENST00000461603 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
LMBR1-215ENST00000461603 SMYD5Q6GMV2 418 aa10.52□□□□□ -0.73
LMBR1-215ENST00000461603 PTPREP23469 700 aa10.5□□□□□ -0.73
LMBR1-215ENST00000461603 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
LMBR1-215ENST00000461603 SLC4A5Q9BY07 1137 aa10.49□□□□□ -0.73
LMBR1-215ENST00000461603 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
LMBR1-215ENST00000461603 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
LMBR1-215ENST00000461603 DDX12PQ92771 950 aa10.48□□□□□ -0.73
LMBR1-215ENST00000461603 TK2O00142 265 aa10.47□□□□□ -0.73
LMBR1-215ENST00000461603 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
LMBR1-215ENST00000461603 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
LMBR1-215ENST00000461603 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
LMBR1-215ENST00000461603 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
LMBR1-215ENST00000461603 OSBPP22059 807 aa10.46□□□□□ -0.73
LMBR1-215ENST00000461603 NBR1Q14596 966 aa10.46□□□□□ -0.73
LMBR1-215ENST00000461603 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
LMBR1-215ENST00000461603 EIF4G3O43432 1585 aaKnown RBP10.45□□□□□ -0.74
LMBR1-215ENST00000461603 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
LMBR1-215ENST00000461603 LSM11P83369 360 aaKnown RBP eCLIP10.45□□□□□ -0.74
LMBR1-215ENST00000461603 CHD1O14646 1710 aa10.44□□□□□ -0.74
LMBR1-215ENST00000461603 GRXCR2A6NFK2 248 aa10.44□□□□□ -0.74
LMBR1-215ENST00000461603 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
LMBR1-215ENST00000461603 SEMA3EO15041 775 aa10.44□□□□□ -0.74
LMBR1-215ENST00000461603 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
LMBR1-215ENST00000461603 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
LMBR1-215ENST00000461603 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
LMBR1-215ENST00000461603 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
LMBR1-215ENST00000461603 MAP3K7O43318 606 aa10.41□□□□□ -0.74
LMBR1-215ENST00000461603 MLLT3P42568 568 aaPredicted RBP10.41□□□□□ -0.74
LMBR1-215ENST00000461603 KCNK17Q96T54 332 aa10.41□□□□□ -0.74
LMBR1-215ENST00000461603 TOPBP1Q92547 1522 aa10.4□□□□□ -0.74
LMBR1-215ENST00000461603 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
LMBR1-215ENST00000461603 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.75
LMBR1-215ENST00000461603 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
LMBR1-215ENST00000461603 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■■■■ 33.8
LMBR1-215ENST00000461603 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
LMBR1-215ENST00000461603 PSEN2P49810 448 aa10.37□□□□□ -0.75
LMBR1-215ENST00000461603 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
LMBR1-215ENST00000461603 ADGRD1Q6QNK2 874 aa10.36□□□□□ -0.75
LMBR1-215ENST00000461603 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
LMBR1-215ENST00000461603 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
LMBR1-215ENST00000461603 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
LMBR1-215ENST00000461603 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
LMBR1-215ENST00000461603 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
LMBR1-215ENST00000461603 ANKRD13DQ6ZTN6 518 aa10.33□□□□□ -0.76
LMBR1-215ENST00000461603 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
LMBR1-215ENST00000461603 DNMBPQ6XZF7 1577 aa10.32□□□□□ -0.76
LMBR1-215ENST00000461603 HRO43593 1189 aa10.32□□□□□ -0.76
LMBR1-215ENST00000461603 COL9A1P20849 921 aa10.32□□□□□ -0.76
LMBR1-215ENST00000461603 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
LMBR1-215ENST00000461603 SPNS2Q8IVW8 549 aa10.31□□□□□ -0.76
LMBR1-215ENST00000461603 BCANQ96GW7 911 aa10.31□□□□□ -0.76
LMBR1-215ENST00000461603 NBPF3Q9H094 633 aa10.31□□□□□ -0.76
LMBR1-215ENST00000461603 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
LMBR1-215ENST00000461603 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
LMBR1-215ENST00000461603 TRIM6-TRIM34B2RNG4 842 aa10.3□□□□□ -0.76
LMBR1-215ENST00000461603 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-215ENST00000461603 PRSS12P56730 875 aa10.3□□□□□ -0.76
LMBR1-215ENST00000461603 PTGDRQ13258 359 aa10.3□□□□□ -0.76
LMBR1-215ENST00000461603 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-215ENST00000461603 FCHSD2O94868 740 aa10.29□□□□□ -0.76
LMBR1-215ENST00000461603 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
LMBR1-215ENST00000461603 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
LMBR1-215ENST00000461603 HIC1Q14526 733 aa10.28□□□□□ -0.76
LMBR1-215ENST00000461603 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
LMBR1-215ENST00000461603 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
LMBR1-215ENST00000461603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
LMBR1-215ENST00000461603 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
LMBR1-215ENST00000461603 POLA1P09884 1462 aaPredicted RBP10.27□□□□□ -0.77
LMBR1-215ENST00000461603 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms