RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 DEPDC5O75140 1603 aa15.99■□□□□ 0.15
FN1-214ENST00000460217 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
FN1-214ENST00000460217 UNC13BO14795 1591 aa15.99■□□□□ 0.15
FN1-214ENST00000460217 SIGLEC1Q9BZZ2 1709 aa15.98■□□□□ 0.15
FN1-214ENST00000460217 PRDM15P57071 1507 aaPredicted RBP15.95■□□□□ 0.14
FN1-214ENST00000460217 KDM5DQ9BY66 1539 aa15.95■□□□□ 0.14
FN1-214ENST00000460217 MROH1Q8NDA8 1641 aa15.95■□□□□ 0.14
FN1-214ENST00000460217 KIF3BO15066 747 aa15.94■□□□□ 0.14
FN1-214ENST00000460217 VWDEQ8N2E2 1590 aa15.93■□□□□ 0.14
FN1-214ENST00000460217 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
FN1-214ENST00000460217 FAM135AQ9P2D6 1515 aa15.92■□□□□ 0.14
FN1-214ENST00000460217 NUP155O75694 1391 aa15.89■□□□□ 0.13
FN1-214ENST00000460217 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
FN1-214ENST00000460217 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
FN1-214ENST00000460217 PZPP20742 1482 aa15.88■□□□□ 0.13
FN1-214ENST00000460217 LMTK2Q8IWU2 1503 aa15.88■□□□□ 0.13
FN1-214ENST00000460217 KANK1Q14678 1352 aa15.87■□□□□ 0.13
FN1-214ENST00000460217 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
FN1-214ENST00000460217 ABCC3O15438 1527 aa15.86■□□□□ 0.13
FN1-214ENST00000460217 TET3O43151 1660 aa15.86■□□□□ 0.13
FN1-214ENST00000460217 GGT6Q6P531 493 aa15.85■□□□□ 0.13
FN1-214ENST00000460217 ARID4BQ4LE39 1312 aaPredicted RBP15.85■□□□□ 0.13
FN1-214ENST00000460217 CEP152O94986 1710 aa15.85■□□□□ 0.13
FN1-214ENST00000460217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
FN1-214ENST00000460217 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
FN1-214ENST00000460217 MPHOSPH9Q99550 1183 aa15.83■□□□□ 0.12
FN1-214ENST00000460217 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
FN1-214ENST00000460217 EFCAB6Q5THR3 1501 aa15.82■□□□□ 0.12
FN1-214ENST00000460217 CAMSAP1Q5T5Y3 1602 aa15.81■□□□□ 0.12
FN1-214ENST00000460217 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
FN1-214ENST00000460217 WASHC2CQ9Y4E1 1318 aa15.81■□□□□ 0.12
FN1-214ENST00000460217 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
FN1-214ENST00000460217 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
FN1-214ENST00000460217 ADAMTSL3P82987 1691 aa15.8■□□□□ 0.12
FN1-214ENST00000460217 E9PCH4 1651 aa15.79■□□□□ 0.12
FN1-214ENST00000460217 CLTCQ00610 1675 aaKnown RBP15.79■□□□□ 0.12
FN1-214ENST00000460217 RPRD2Q5VT52 1461 aaKnown RBP15.79■□□□□ 0.12
FN1-214ENST00000460217 ARHGAP31Q2M1Z3 1444 aa15.79■□□□□ 0.12
FN1-214ENST00000460217 MLECQ14165 292 aa15.79■□□□□ 0.12
FN1-214ENST00000460217 NPATQ14207 1427 aa15.77■□□□□ 0.11
FN1-214ENST00000460217 PKD2Q13563 968 aa15.76■□□□□ 0.11
FN1-214ENST00000460217 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
FN1-214ENST00000460217 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
FN1-214ENST00000460217 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
FN1-214ENST00000460217 CFAP65Q6ZU64 1925 aaKnown RBP15.73■□□□□ 0.11
FN1-214ENST00000460217 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
FN1-214ENST00000460217 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
FN1-214ENST00000460217 PTPRTO14522 1441 aa15.72■□□□□ 0.11
FN1-214ENST00000460217 ANKRD30BQ9BXX2 1392 aa15.72■□□□□ 0.11
FN1-214ENST00000460217 C3P01024 1663 aa15.71■□□□□ 0.11
FN1-214ENST00000460217 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
FN1-214ENST00000460217 PREX1Q8TCU6 1659 aa15.71■□□□□ 0.11
FN1-214ENST00000460217 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
FN1-214ENST00000460217 NOS1P29475 1434 aa15.7■□□□□ 0.1
FN1-214ENST00000460217 TRPM2O94759 1503 aa15.7■□□□□ 0.1
FN1-214ENST00000460217 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
FN1-214ENST00000460217 FOXD1Q16676 465 aa15.69■□□□□ 0.1
FN1-214ENST00000460217 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
FN1-214ENST00000460217 SPATA31D1Q6ZQQ2 1576 aa15.69■□□□□ 0.1
FN1-214ENST00000460217 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
FN1-214ENST00000460217 SYNMO15061 1565 aa15.66■□□□□ 0.1
FN1-214ENST00000460217 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
FN1-214ENST00000460217 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
FN1-214ENST00000460217 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
FN1-214ENST00000460217 PTPRMP28827 1452 aa15.64■□□□□ 0.09
FN1-214ENST00000460217 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
FN1-214ENST00000460217 FBXO31Q5XUX0 539 aaPredicted RBP15.62■□□□□ 0.09
FN1-214ENST00000460217 NEURL4Q96JN8 1562 aa15.62■□□□□ 0.09
FN1-214ENST00000460217 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
FN1-214ENST00000460217 SLC52A1Q9NWF4 448 aa15.61■□□□□ 0.09
FN1-214ENST00000460217 TNRQ92752 1358 aa15.61■□□□□ 0.09
FN1-214ENST00000460217 KIF1BO60333 1816 aa15.6■□□□□ 0.09
FN1-214ENST00000460217 UGGT1Q9NYU2 1555 aa15.6■□□□□ 0.09
FN1-214ENST00000460217 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
FN1-214ENST00000460217 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
FN1-214ENST00000460217 KDM5AP29375 1690 aaKnown RBP15.58■□□□□ 0.08
FN1-214ENST00000460217 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
FN1-214ENST00000460217 IDI1Q13907 227 aa15.56■□□□□ 0.08
FN1-214ENST00000460217 SPATA31E1Q6ZUB1 1445 aa15.56■□□□□ 0.08
FN1-214ENST00000460217 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
FN1-214ENST00000460217 MYO3AQ8NEV4 1616 aa15.56■□□□□ 0.08
FN1-214ENST00000460217 TMEM131LA2VDJ0 1609 aa15.55■□□□□ 0.08
FN1-214ENST00000460217 TIMELESSQ9UNS1 1208 aa15.54■□□□□ 0.08
FN1-214ENST00000460217 ZNF142P52746 1687 aaPredicted RBP15.54■□□□□ 0.08
FN1-214ENST00000460217 MYO5BQ9ULV0 1848 aa15.53■□□□□ 0.08
FN1-214ENST00000460217 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
FN1-214ENST00000460217 UBR1Q8IWV7 1749 aa15.52■□□□□ 0.08
FN1-214ENST00000460217 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.07
FN1-214ENST00000460217 CEP170BQ9Y4F5 1589 aaPredicted RBP15.51■□□□□ 0.07
FN1-214ENST00000460217 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
FN1-214ENST00000460217 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
FN1-214ENST00000460217 UHRF1BP1Q6BDS2 1440 aa15.48■□□□□ 0.07
FN1-214ENST00000460217 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
FN1-214ENST00000460217 PPLO60437 1756 aa15.47■□□□□ 0.07
FN1-214ENST00000460217 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
FN1-214ENST00000460217 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
FN1-214ENST00000460217 STAC3Q96MF2 364 aa15.47■□□□□ 0.07
FN1-214ENST00000460217 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
FN1-214ENST00000460217 NEXMIFQ5QGS0 1516 aa15.46■□□□□ 0.07
FN1-214ENST00000460217 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms