RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MRPL50Q8N5N7 158 aaKnown RBP7.93□□□□□ -1.14
VPS8-215ENST00000460158 KCNV2Q8TDN2 545 aa7.93□□□□□ -1.14
VPS8-215ENST00000460158 NBPF3Q9H094 633 aa7.93□□□□□ -1.14
VPS8-215ENST00000460158 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
VPS8-215ENST00000460158 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
VPS8-215ENST00000460158 PTPN5P54829 565 aa7.92□□□□□ -1.14
VPS8-215ENST00000460158 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 E2F4Q16254 413 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 IFFO2Q5TF58 517 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 P3H3Q8IVL6 736 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 FBXW7Q969H0 707 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
VPS8-215ENST00000460158 NBR1Q14596 966 aa7.9□□□□□ -1.14
VPS8-215ENST00000460158 WNT2BQ93097 391 aa7.9□□□□□ -1.14
VPS8-215ENST00000460158 PHF14O94880 888 aa7.89□□□□□ -1.15
VPS8-215ENST00000460158 TYW1BQ6NUM6 668 aa7.89□□□□□ -1.15
VPS8-215ENST00000460158 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
VPS8-215ENST00000460158 RABGEF1Q9UJ41 708 aa7.88□□□□□ -1.15
VPS8-215ENST00000460158 RGS20O76081 388 aa7.87□□□□□ -1.15
VPS8-215ENST00000460158 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
VPS8-215ENST00000460158 LAPTM4BQ86VI4 370 aa7.85□□□□□ -1.15
VPS8-215ENST00000460158 ARHGEF1Q92888 912 aaKnown RBP7.85□□□□□ -1.15
VPS8-215ENST00000460158 EPAS1Q99814 870 aa7.85□□□□□ -1.15
VPS8-215ENST00000460158 COL9A1P20849 921 aa7.84□□□□□ -1.15
VPS8-215ENST00000460158 PROX2Q3B8N5 592 aa7.83□□□□□ -1.16
VPS8-215ENST00000460158 ANKK1Q8NFD2 765 aa7.83□□□□□ -1.16
VPS8-215ENST00000460158 DPYSL4O14531 572 aa7.81□□□□□ -1.16
VPS8-215ENST00000460158 C6orf132Q5T0Z8 1188 aa7.81□□□□□ -1.16
VPS8-215ENST00000460158 A0A0G2JS52 829 aa7.8□□□□□ -1.16
VPS8-215ENST00000460158 NYAP1Q6ZVC0 841 aa7.8□□□□□ -1.16
VPS8-215ENST00000460158 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
VPS8-215ENST00000460158 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
VPS8-215ENST00000460158 SOWAHBA6NEL2 793 aa7.78□□□□□ -1.16
VPS8-215ENST00000460158 SEMA3EO15041 775 aa7.78□□□□□ -1.16
VPS8-215ENST00000460158 ZFRQ96KR1 1074 aaKnown RBP7.78□□□□□ -1.16
VPS8-215ENST00000460158 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
VPS8-215ENST00000460158 ITGBL1O95965 494 aaPredicted RBP7.77□□□□□ -1.17
VPS8-215ENST00000460158 BCAMP50895 628 aa7.76□□□□□ -1.17
VPS8-215ENST00000460158 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
VPS8-215ENST00000460158 PDIA6Q15084 440 aa7.75□□□□□ -1.17
VPS8-215ENST00000460158 FAM98CQ17RN3 349 aaKnown RBP7.75□□□□□ -1.17
VPS8-215ENST00000460158 DDX12PQ92771 950 aa7.75□□□□□ -1.17
VPS8-215ENST00000460158 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
VPS8-215ENST00000460158 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
VPS8-215ENST00000460158 TESPA1A2RU30 521 aaPredicted RBP7.73□□□□□ -1.17
VPS8-215ENST00000460158 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
VPS8-215ENST00000460158 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
VPS8-215ENST00000460158 SEPT9Q9UHD8 586 aaPredicted RBP7.73□□□□□ -1.17
VPS8-215ENST00000460158 IRX2Q9BZI1 471 aaPredicted RBP7.72□□□□□ -1.17
VPS8-215ENST00000460158 WBP1LQ9NX94 342 aa7.72□□□□□ -1.17
VPS8-215ENST00000460158 MAP3K7O43318 606 aa7.71□□□□□ -1.18
VPS8-215ENST00000460158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS8-215ENST00000460158 PACS2Q86VP3 889 aa7.71□□□□□ -1.18
VPS8-215ENST00000460158 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.71□□□□□ -1.18
VPS8-215ENST00000460158 LRCH3Q96II8 777 aa7.7□□□□□ -1.18
VPS8-215ENST00000460158 TSR3Q9UJK0 312 aaKnown RBP7.7□□□□□ -1.18
VPS8-215ENST00000460158 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
VPS8-215ENST00000460158 KCNC4Q03721 635 aa7.69□□□□□ -1.18
VPS8-215ENST00000460158 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
VPS8-215ENST00000460158 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
VPS8-215ENST00000460158 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
VPS8-215ENST00000460158 TSKSQ9UJT2 592 aa7.68□□□□□ -1.18
VPS8-215ENST00000460158 TULP1O00294 542 aaPredicted RBP7.67□□□□□ -1.18
VPS8-215ENST00000460158 HPS5Q9UPZ3 1129 aa7.67□□□□□ -1.18
VPS8-215ENST00000460158 CDCA7LQ96GN5 454 aa7.66□□□□□ -1.18
VPS8-215ENST00000460158 PRSS12P56730 875 aa7.65□□□□□ -1.18
VPS8-215ENST00000460158 SMYD5Q6GMV2 418 aa7.65□□□□□ -1.18
VPS8-215ENST00000460158 PPP4CP60510 307 aa7.64□□□□□ -1.19
VPS8-215ENST00000460158 GRXCR2A6NFK2 248 aa7.63□□□□□ -1.19
VPS8-215ENST00000460158 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
VPS8-215ENST00000460158 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
VPS8-215ENST00000460158 NBPF26B4DH59 902 aa7.61□□□□□ -1.19
VPS8-215ENST00000460158 PRIM1P49642 420 aaKnown RBP7.61□□□□□ -1.19
VPS8-215ENST00000460158 TATDN2Q93075 761 aa7.61□□□□□ -1.19
VPS8-215ENST00000460158 FAM198AQ9UFP1 575 aa7.61□□□□□ -1.19
VPS8-215ENST00000460158 OSBPP22059 807 aa7.6□□□□□ -1.19
VPS8-215ENST00000460158 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
VPS8-215ENST00000460158 SMAPO00193 183 aa7.59□□□□□ -1.19
VPS8-215ENST00000460158 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
VPS8-215ENST00000460158 TJAP1Q5JTD0 557 aa7.58□□□□□ -1.2
VPS8-215ENST00000460158 PNMA3Q9UL41 463 aa7.58□□□□□ -1.2
VPS8-215ENST00000460158 HDGFP51858 240 aaKnown RBP7.57□□□□□ -1.2
VPS8-215ENST00000460158 C3orf80F5H4A9 247 aa7.56□□□□□ -1.2
VPS8-215ENST00000460158 LAPTM4AQ15012 233 aa7.56□□□□□ -1.2
VPS8-215ENST00000460158 NUDT18Q6ZVK8 323 aa7.56□□□□□ -1.2
VPS8-215ENST00000460158 TTC13Q8NBP0 860 aa7.56□□□□□ -1.2
VPS8-215ENST00000460158 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
VPS8-215ENST00000460158 GPIHBP1Q8IV16 184 aa7.55□□□□□ -1.2
VPS8-215ENST00000460158 CDHR5Q9HBB8 845 aa7.55□□□□□ -1.2
VPS8-215ENST00000460158 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
VPS8-215ENST00000460158 MTRQ99707 1265 aa7.54□□□□□ -1.2
VPS8-215ENST00000460158 Q6ZNB5 142 aa7.53□□□□□ -1.2
VPS8-215ENST00000460158 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
VPS8-215ENST00000460158 NUTM2FA1L443 756 aa7.52□□□□□ -1.21
VPS8-215ENST00000460158 ZMYND10O75800 440 aa7.52□□□□□ -1.21
VPS8-215ENST00000460158 GPR37O15354 613 aa7.51□□□□□ -1.21
VPS8-215ENST00000460158 SLF2Q8IX21 1173 aa7.51□□□□□ -1.21
VPS8-215ENST00000460158 RNF40O75150 1001 aa7.5□□□□□ -1.21
VPS8-215ENST00000460158 APLP1P51693 650 aa7.5□□□□□ -1.21
VPS8-215ENST00000460158 PPP1R18Q6NYC8 613 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms