RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 CRBNQ96SW2 442 aa15.32■□□□□ 0.04
UBE2L3-202ENST00000458578 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
UBE2L3-202ENST00000458578 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
UBE2L3-202ENST00000458578 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
UBE2L3-202ENST00000458578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.042e-11■■■□□ 17.3
UBE2L3-202ENST00000458578 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
UBE2L3-202ENST00000458578 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
UBE2L3-202ENST00000458578 KIF14Q15058 1648 aa15.3■□□□□ 0.04
UBE2L3-202ENST00000458578 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
UBE2L3-202ENST00000458578 RALBP1Q15311 655 aa15.29■□□□□ 0.04
UBE2L3-202ENST00000458578 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
UBE2L3-202ENST00000458578 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
UBE2L3-202ENST00000458578 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
UBE2L3-202ENST00000458578 C20orf194Q5TEA3 1177 aa15.27■□□□□ 0.04
UBE2L3-202ENST00000458578 ROCK2O75116 1388 aaKnown RBP15.27■□□□□ 0.04
UBE2L3-202ENST00000458578 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
UBE2L3-202ENST00000458578 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
UBE2L3-202ENST00000458578 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
UBE2L3-202ENST00000458578 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
UBE2L3-202ENST00000458578 MS4A1P11836 297 aa15.25■□□□□ 0.03
UBE2L3-202ENST00000458578 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
UBE2L3-202ENST00000458578 KDM5CP41229 1560 aa15.24■□□□□ 0.03
UBE2L3-202ENST00000458578 NFKBIBQ15653 356 aa15.24■□□□□ 0.03
UBE2L3-202ENST00000458578 MBD5Q9P267 1494 aa15.23■□□□□ 0.03
UBE2L3-202ENST00000458578 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
UBE2L3-202ENST00000458578 RGS3P49796 1198 aa15.23■□□□□ 0.03
UBE2L3-202ENST00000458578 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
UBE2L3-202ENST00000458578 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
UBE2L3-202ENST00000458578 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
UBE2L3-202ENST00000458578 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
UBE2L3-202ENST00000458578 GSE1Q14687 1217 aa15.22■□□□□ 0.03
UBE2L3-202ENST00000458578 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
UBE2L3-202ENST00000458578 PDE3BQ13370 1112 aa15.21■□□□□ 0.02
UBE2L3-202ENST00000458578 FRAT1Q92837 279 aaPredicted RBP15.21■□□□□ 0.02
UBE2L3-202ENST00000458578 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
UBE2L3-202ENST00000458578 PANK3Q9H999 370 aa15.18■□□□□ 0.02
UBE2L3-202ENST00000458578 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
UBE2L3-202ENST00000458578 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
UBE2L3-202ENST00000458578 ATP10BO94823 1461 aa15.16■□□□□ 0.02
UBE2L3-202ENST00000458578 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
UBE2L3-202ENST00000458578 ADGRL2O95490 1459 aa15.16■□□□□ 0.02
UBE2L3-202ENST00000458578 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
UBE2L3-202ENST00000458578 FRAT2O75474 233 aaPredicted RBP15.15■□□□□ 0.02
UBE2L3-202ENST00000458578 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
UBE2L3-202ENST00000458578 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
UBE2L3-202ENST00000458578 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
UBE2L3-202ENST00000458578 PER1O15534 1290 aaPredicted RBP15.14■□□□□ 0.01
UBE2L3-202ENST00000458578 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
UBE2L3-202ENST00000458578 UHRF1BP1Q6BDS2 1440 aa15.12■□□□□ 0.01
UBE2L3-202ENST00000458578 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
UBE2L3-202ENST00000458578 ARXQ96QS3 562 aa15.11■□□□□ 0.01
UBE2L3-202ENST00000458578 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
UBE2L3-202ENST00000458578 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE2L3-202ENST00000458578 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
UBE2L3-202ENST00000458578 CDC42BPAQ5VT25 1732 aa15.1■□□□□ 0.01
UBE2L3-202ENST00000458578 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 PTPRGP23470 1445 aa15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 C8orf34Q49A92 452 aa15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 CENPQQ7L2Z9 268 aaPredicted RBP15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
UBE2L3-202ENST00000458578 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
UBE2L3-202ENST00000458578 NUP160Q12769 1436 aa15.05■□□□□ -0
UBE2L3-202ENST00000458578 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
UBE2L3-202ENST00000458578 ADCY10Q96PN6 1610 aa15.05■□□□□ -0
UBE2L3-202ENST00000458578 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
UBE2L3-202ENST00000458578 PLEKHH1Q9ULM0 1364 aa15.05■□□□□ -0
UBE2L3-202ENST00000458578 TMF1P82094 1093 aa15.04■□□□□ -0
UBE2L3-202ENST00000458578 GOLGA2Q08379 1002 aa15.04■□□□□ -0
UBE2L3-202ENST00000458578 TESK2Q96S53 571 aa15.04■□□□□ -0
UBE2L3-202ENST00000458578 KNSTRNQ9Y448 316 aa15.04■□□□□ -0
UBE2L3-202ENST00000458578 FAM135AQ9P2D6 1515 aa15.04■□□□□ -0
UBE2L3-202ENST00000458578 BCAR3O75815 825 aa15.03■□□□□ -0
UBE2L3-202ENST00000458578 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
UBE2L3-202ENST00000458578 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
UBE2L3-202ENST00000458578 ARHGEF12Q9NZN5 1544 aa15.03■□□□□ -0
UBE2L3-202ENST00000458578 ABCA8O94911 1581 aa15.02□□□□□ -0.01
UBE2L3-202ENST00000458578 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
UBE2L3-202ENST00000458578 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
UBE2L3-202ENST00000458578 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
UBE2L3-202ENST00000458578 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
UBE2L3-202ENST00000458578 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
UBE2L3-202ENST00000458578 POGKQ9P215 609 aa15□□□□□ -0.01
UBE2L3-202ENST00000458578 PLEKHH2Q8IVE3 1493 aa15□□□□□ -0.01
UBE2L3-202ENST00000458578 APAF1O14727 1248 aa14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 SYCP2Q9BX26 1530 aa14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 E9PCH4 1651 aa14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
UBE2L3-202ENST00000458578 ERBINQ96RT1 1412 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 SEC24BO95487 1268 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 SAMD9LQ8IVG5 1584 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 A2MP01023 1474 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 IGHDP01880 384 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
UBE2L3-202ENST00000458578 ZMYM4Q5VZL5 1548 aa14.97□□□□□ -0.01
UBE2L3-202ENST00000458578 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms