RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
PXN-206ENST00000458477 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
PXN-206ENST00000458477 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
PXN-206ENST00000458477 MAGI3Q5TCQ9 1506 aa13.87□□□□□ -0.19
PXN-206ENST00000458477 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
PXN-206ENST00000458477 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
PXN-206ENST00000458477 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
PXN-206ENST00000458477 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
PXN-206ENST00000458477 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
PXN-206ENST00000458477 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
PXN-206ENST00000458477 MS4A1P11836 297 aa13.85□□□□□ -0.19
PXN-206ENST00000458477 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
PXN-206ENST00000458477 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
PXN-206ENST00000458477 KDM6BO15054 1643 aa13.84□□□□□ -0.19
PXN-206ENST00000458477 DHX29Q7Z478 1369 aaKnown RBP13.84□□□□□ -0.19
PXN-206ENST00000458477 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
PXN-206ENST00000458477 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
PXN-206ENST00000458477 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
PXN-206ENST00000458477 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
PXN-206ENST00000458477 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
PXN-206ENST00000458477 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
PXN-206ENST00000458477 SAMD9Q5K651 1589 aa13.81□□□□□ -0.2
PXN-206ENST00000458477 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
PXN-206ENST00000458477 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
PXN-206ENST00000458477 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
PXN-206ENST00000458477 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
PXN-206ENST00000458477 WDR62O43379 1518 aa13.8□□□□□ -0.2
PXN-206ENST00000458477 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
PXN-206ENST00000458477 BECN1Q14457 450 aa13.79□□□□□ -0.2
PXN-206ENST00000458477 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
PXN-206ENST00000458477 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
PXN-206ENST00000458477 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
PXN-206ENST00000458477 APAF1O14727 1248 aa13.77□□□□□ -0.21
PXN-206ENST00000458477 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
PXN-206ENST00000458477 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.21
PXN-206ENST00000458477 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
PXN-206ENST00000458477 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
PXN-206ENST00000458477 C20orf194Q5TEA3 1177 aa13.76□□□□□ -0.21
PXN-206ENST00000458477 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
PXN-206ENST00000458477 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
PXN-206ENST00000458477 PZPP20742 1482 aa13.76□□□□□ -0.21
PXN-206ENST00000458477 GSE1Q14687 1217 aa13.74□□□□□ -0.21
PXN-206ENST00000458477 GPATCH8Q9UKJ3 1502 aaKnown RBP13.74□□□□□ -0.21
PXN-206ENST00000458477 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
PXN-206ENST00000458477 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
PXN-206ENST00000458477 GCC2Q8IWJ2 1684 aa13.73□□□□□ -0.21
PXN-206ENST00000458477 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
PXN-206ENST00000458477 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
PXN-206ENST00000458477 ARHGEF11O15085 1522 aa13.72□□□□□ -0.21
PXN-206ENST00000458477 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
PXN-206ENST00000458477 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
PXN-206ENST00000458477 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
PXN-206ENST00000458477 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
PXN-206ENST00000458477 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
PXN-206ENST00000458477 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
PXN-206ENST00000458477 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
PXN-206ENST00000458477 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.22
PXN-206ENST00000458477 COG6Q9Y2V7 657 aa13.71□□□□□ -0.22
PXN-206ENST00000458477 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
PXN-206ENST00000458477 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
PXN-206ENST00000458477 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
PXN-206ENST00000458477 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
PXN-206ENST00000458477 HSP90AA1P07900 732 aaKnown RBP13.7□□□□□ -0.22
PXN-206ENST00000458477 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
PXN-206ENST00000458477 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
PXN-206ENST00000458477 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
PXN-206ENST00000458477 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
PXN-206ENST00000458477 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
PXN-206ENST00000458477 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
PXN-206ENST00000458477 ERBINQ96RT1 1412 aa13.68□□□□□ -0.22
PXN-206ENST00000458477 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
PXN-206ENST00000458477 KIF3BO15066 747 aa13.67□□□□□ -0.22
PXN-206ENST00000458477 GGT6Q6P531 493 aa13.67□□□□□ -0.22
PXN-206ENST00000458477 DISP3Q9P2K9 1392 aa13.67□□□□□ -0.22
PXN-206ENST00000458477 LRPPRCP42704 1394 aaKnown RBP13.67□□□□□ -0.22
PXN-206ENST00000458477 BCAR3O75815 825 aa13.67□□□□□ -0.22
PXN-206ENST00000458477 E9PSI1 815 aa13.66□□□□□ -0.22
PXN-206ENST00000458477 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
PXN-206ENST00000458477 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
PXN-206ENST00000458477 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
PXN-206ENST00000458477 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
PXN-206ENST00000458477 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
PXN-206ENST00000458477 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
PXN-206ENST00000458477 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
PXN-206ENST00000458477 KANK1Q14678 1352 aa13.64□□□□□ -0.23
PXN-206ENST00000458477 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
PXN-206ENST00000458477 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
PXN-206ENST00000458477 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
PXN-206ENST00000458477 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
PXN-206ENST00000458477 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
PXN-206ENST00000458477 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
PXN-206ENST00000458477 MLECQ14165 292 aa13.63□□□□□ -0.23
PXN-206ENST00000458477 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
PXN-206ENST00000458477 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
PXN-206ENST00000458477 KIAA0556O60303 1618 aa13.62□□□□□ -0.23
PXN-206ENST00000458477 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
PXN-206ENST00000458477 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
PXN-206ENST00000458477 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
PXN-206ENST00000458477 TESK2Q96S53 571 aa13.6□□□□□ -0.23
PXN-206ENST00000458477 CFAP70Q5T0N1 1121 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms