RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.17■■■□□ 2.1
CRAT-207ENST00000458362 ARHGAP5Q13017 1502 aa28.16■■■□□ 2.1
CRAT-207ENST00000458362 MAST1Q9Y2H9 1570 aa28.16■■■□□ 2.1
CRAT-207ENST00000458362 UNC13BO14795 1591 aa28.15■■■□□ 2.1
CRAT-207ENST00000458362 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
CRAT-207ENST00000458362 E9PCH4 1651 aa28.12■■■□□ 2.09
CRAT-207ENST00000458362 SMG6Q86US8 1419 aaKnown RBP28.12■■■□□ 2.09
CRAT-207ENST00000458362 TRPM1Q7Z4N2 1603 aa28.12■■■□□ 2.09
CRAT-207ENST00000458362 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
CRAT-207ENST00000458362 MYO5CQ9NQX4 1742 aa28.09■■■□□ 2.09
CRAT-207ENST00000458362 PRAG1Q86YV5 1406 aa28.09■■■□□ 2.09
CRAT-207ENST00000458362 PNISRQ8TF01 805 aaKnown RBP28.09■■■□□ 2.09
CRAT-207ENST00000458362 CCDC144AA2RUR9 1427 aa28.09■■■□□ 2.09
CRAT-207ENST00000458362 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
CRAT-207ENST00000458362 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
CRAT-207ENST00000458362 B4GALNT3Q6L9W6 998 aa28.05■■■□□ 2.08
CRAT-207ENST00000458362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.08
CRAT-207ENST00000458362 IQGAP3Q86VI3 1631 aa28.04■■■□□ 2.08
CRAT-207ENST00000458362 SENP3-EIF4A1A0A087X0R7 540 aa28.04■■■□□ 2.08
CRAT-207ENST00000458362 PLEKHH2Q8IVE3 1493 aa28.04■■■□□ 2.08
CRAT-207ENST00000458362 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
CRAT-207ENST00000458362 NUDCQ9Y266 331 aa28.03■■■□□ 2.08
CRAT-207ENST00000458362 A2MP01023 1474 aa28.03■■■□□ 2.08
CRAT-207ENST00000458362 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
CRAT-207ENST00000458362 NBPF1Q3BBV0 1214 aa28.01■■■□□ 2.07
CRAT-207ENST00000458362 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
CRAT-207ENST00000458362 MYBBP1AQ9BQG0 1328 aaKnown RBP27.98■■■□□ 2.07
CRAT-207ENST00000458362 BRD4O60885 1362 aaPredicted RBP27.97■■■□□ 2.07
CRAT-207ENST00000458362 MSH5O43196 834 aa27.97■■■□□ 2.07
CRAT-207ENST00000458362 DUOX2Q9NRD8 1548 aa27.96■■■□□ 2.07
CRAT-207ENST00000458362 GPRASP1Q5JY77 1395 aa27.96■■■□□ 2.07
CRAT-207ENST00000458362 RNF123Q5XPI4 1314 aa27.96■■■□□ 2.07
CRAT-207ENST00000458362 RALBP1Q15311 655 aa27.95■■■□□ 2.07
CRAT-207ENST00000458362 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.07
CRAT-207ENST00000458362 MAGI2Q86UL8 1455 aa27.94■■■□□ 2.06
CRAT-207ENST00000458362 LAMC1P11047 1609 aa27.94■■■□□ 2.06
CRAT-207ENST00000458362 ZCCHC11Q5TAX3 1644 aaKnown RBP27.93■■■□□ 2.06
CRAT-207ENST00000458362 PRDM15P57071 1507 aaPredicted RBP27.92■■■□□ 2.06
CRAT-207ENST00000458362 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
CRAT-207ENST00000458362 PLCH2O75038 1416 aa27.91■■■□□ 2.06
CRAT-207ENST00000458362 UHRF1BP1LA0JNW5 1464 aa27.9■■■□□ 2.06
CRAT-207ENST00000458362 ERBINQ96RT1 1412 aa27.9■■■□□ 2.06
CRAT-207ENST00000458362 ATP10AO60312 1499 aa27.88■■■□□ 2.05
CRAT-207ENST00000458362 COL17A1Q9UMD9 1497 aaPredicted RBP27.88■■■□□ 2.05
CRAT-207ENST00000458362 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
CRAT-207ENST00000458362 PARD3Q8TEW0 1356 aa27.88■■■□□ 2.05
CRAT-207ENST00000458362 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
CRAT-207ENST00000458362 DISP3Q9P2K9 1392 aa27.87■■■□□ 2.05
CRAT-207ENST00000458362 ABCC1P33527 1531 aa27.86■■■□□ 2.05
CRAT-207ENST00000458362 TESK2Q96S53 571 aa27.86■■■□□ 2.05
CRAT-207ENST00000458362 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
CRAT-207ENST00000458362 TRAPPC8Q9Y2L5 1435 aa27.85■■■□□ 2.05
CRAT-207ENST00000458362 EFCAB2Q5VUJ9 269 aa27.83■■■□□ 2.04
CRAT-207ENST00000458362 NLRP13Q86W25 1043 aa27.81■■■□□ 2.04
CRAT-207ENST00000458362 RNF17Q9BXT8 1623 aaKnown RBP27.8■■■□□ 2.04
CRAT-207ENST00000458362 ARAP3Q8WWN8 1544 aa27.74■■■□□ 2.03
CRAT-207ENST00000458362 PANK3Q9H999 370 aa27.73■■■□□ 2.03
CRAT-207ENST00000458362 CC2D1BQ5T0F9 858 aaKnown RBP27.72■■■□□ 2.03
CRAT-207ENST00000458362 CCDC136Q96JN2 1154 aa27.72■■■□□ 2.03
CRAT-207ENST00000458362 MADDQ8WXG6 1647 aa27.71■■■□□ 2.03
CRAT-207ENST00000458362 SALL2Q9Y467 1007 aaPredicted RBP27.71■■■□□ 2.03
CRAT-207ENST00000458362 TMF1P82094 1093 aa27.7■■■□□ 2.02
CRAT-207ENST00000458362 ZFYVE16Q7Z3T8 1539 aa27.7■■■□□ 2.02
CRAT-207ENST00000458362 SPAG9O60271 1321 aaKnown RBP27.69■■■□□ 2.02
CRAT-207ENST00000458362 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
CRAT-207ENST00000458362 AFAP1Q8N556 730 aa27.69■■■□□ 2.02
CRAT-207ENST00000458362 RTEL1-TNFRSF6BF6WH68 1400 aa27.68■■■□□ 2.02
CRAT-207ENST00000458362 IQGAP1P46940 1657 aa27.67■■■□□ 2.02
CRAT-207ENST00000458362 TRPM2O94759 1503 aa27.66■■■□□ 2.02
CRAT-207ENST00000458362 CEP152O94986 1710 aa27.65■■■□□ 2.02
CRAT-207ENST00000458362 SPHKAPQ2M3C7 1700 aa27.65■■■□□ 2.02
CRAT-207ENST00000458362 RRP1P56182 461 aaKnown RBP27.65■■■□□ 2.02
CRAT-207ENST00000458362 CLTCL1P53675 1640 aa27.64■■■□□ 2.02
CRAT-207ENST00000458362 DEPDC5O75140 1603 aa27.64■■■□□ 2.01
CRAT-207ENST00000458362 BLMP54132 1417 aaPredicted RBP27.62■■■□□ 2.01
CRAT-207ENST00000458362 RCAN3Q9UKA8 241 aa27.62■■■□□ 2.01
CRAT-207ENST00000458362 PTPRTO14522 1441 aa27.61■■■□□ 2.01
CRAT-207ENST00000458362 WDR7Q9Y4E6 1490 aa27.61■■■□□ 2.01
CRAT-207ENST00000458362 PDE3BQ13370 1112 aa27.6■■■□□ 2.01
CRAT-207ENST00000458362 CDCA7LQ96GN5 454 aa27.6■■■□□ 2.01
CRAT-207ENST00000458362 TET3O43151 1660 aa27.58■■■□□ 2.01
CRAT-207ENST00000458362 INSRP06213 1382 aa27.57■■■□□ 2
CRAT-207ENST00000458362 EXOC6Q8TAG9 804 aa27.57■■■□□ 2
CRAT-207ENST00000458362 INO80Q9ULG1 1556 aaPredicted RBP27.57■■■□□ 2
CRAT-207ENST00000458362 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
CRAT-207ENST00000458362 ATP7AQ04656 1500 aa27.56■■■□□ 2
CRAT-207ENST00000458362 ABCA9Q8IUA7 1624 aa27.55■■■□□ 2
CRAT-207ENST00000458362 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
CRAT-207ENST00000458362 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
CRAT-207ENST00000458362 SCAPERQ9BY12 1400 aa27.53■■■□□ 2
CRAT-207ENST00000458362 STAC3Q96MF2 364 aa27.53■■■□□ 2
CRAT-207ENST00000458362 SCAF11Q99590 1463 aaKnown RBP27.53■■■□□ 2
CRAT-207ENST00000458362 FANCAO15360 1455 aa27.52■■■□□ 2
CRAT-207ENST00000458362 SYNMO15061 1565 aa27.49■■□□□ 1.99
CRAT-207ENST00000458362 MYOM1P52179 1685 aa27.47■■□□□ 1.99
CRAT-207ENST00000458362 MROH1Q8NDA8 1641 aa27.47■■□□□ 1.99
CRAT-207ENST00000458362 KANK1Q14678 1352 aa27.47■■□□□ 1.99
CRAT-207ENST00000458362 PPP2R1AP30153 589 aa27.46■■□□□ 1.99
CRAT-207ENST00000458362 AMER1Q5JTC6 1135 aaPredicted RBP27.46■■□□□ 1.99
CRAT-207ENST00000458362 KNSTRNQ9Y448 316 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms