RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RALGAPBQ86X10 1494 aa26.2■■□□□ 1.78
CNEP1R1-203ENST00000458059 RNF123Q5XPI4 1314 aa26.19■■□□□ 1.78
CNEP1R1-203ENST00000458059 RRP1P56182 461 aaKnown RBP26.18■■□□□ 1.78
CNEP1R1-203ENST00000458059 RCAN3Q9UKA8 241 aa26.18■■□□□ 1.78
CNEP1R1-203ENST00000458059 ARID4BQ4LE39 1312 aaPredicted RBP26.15■■□□□ 1.78
CNEP1R1-203ENST00000458059 ATP10BO94823 1461 aa26.15■■□□□ 1.78
CNEP1R1-203ENST00000458059 RALBP1Q15311 655 aa26.14■■□□□ 1.78
CNEP1R1-203ENST00000458059 CROCC2H7BZ55 1655 aa26.14■■□□□ 1.78
CNEP1R1-203ENST00000458059 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
CNEP1R1-203ENST00000458059 ZBTB47Q9UFB7 747 aaPredicted RBP26.13■■□□□ 1.77
CNEP1R1-203ENST00000458059 UHRF1BP1Q6BDS2 1440 aa26.13■■□□□ 1.77
CNEP1R1-203ENST00000458059 IPO9Q96P70 1041 aaKnown RBP26.12■■□□□ 1.77
CNEP1R1-203ENST00000458059 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
CNEP1R1-203ENST00000458059 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
CNEP1R1-203ENST00000458059 BRD4O60885 1362 aaPredicted RBP26.11■■□□□ 1.77
CNEP1R1-203ENST00000458059 NLRP13Q86W25 1043 aa26.1■■□□□ 1.77
CNEP1R1-203ENST00000458059 KTN1Q86UP2 1357 aaKnown RBP26.1■■□□□ 1.77
CNEP1R1-203ENST00000458059 LRPPRCP42704 1394 aaKnown RBP26.09■■□□□ 1.77
CNEP1R1-203ENST00000458059 PANK3Q9H999 370 aa26.08■■□□□ 1.77
CNEP1R1-203ENST00000458059 CCDC144AA2RUR9 1427 aa26.07■■□□□ 1.76
CNEP1R1-203ENST00000458059 ABCC10Q5T3U5 1492 aa26.06■■□□□ 1.76
CNEP1R1-203ENST00000458059 LAS1LQ9Y4W2 734 aaKnown RBP26.04■■□□□ 1.76
CNEP1R1-203ENST00000458059 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
CNEP1R1-203ENST00000458059 ADCY10Q96PN6 1610 aa26.03■■□□□ 1.76
CNEP1R1-203ENST00000458059 PER1O15534 1290 aaPredicted RBP26.01■■□□□ 1.75
CNEP1R1-203ENST00000458059 ARHGEF12Q9NZN5 1544 aa26■■□□□ 1.75
CNEP1R1-203ENST00000458059 RTL5Q5HYW3 569 aaPredicted RBP25.99■■□□□ 1.75
CNEP1R1-203ENST00000458059 FAM135AQ9P2D6 1515 aa25.99■■□□□ 1.75
CNEP1R1-203ENST00000458059 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
CNEP1R1-203ENST00000458059 CRBNQ96SW2 442 aa25.98■■□□□ 1.75
CNEP1R1-203ENST00000458059 PTPRGP23470 1445 aa25.98■■□□□ 1.75
CNEP1R1-203ENST00000458059 PDE4AP27815 886 aa25.97■■□□□ 1.75
CNEP1R1-203ENST00000458059 PARD3Q8TEW0 1356 aa25.96■■□□□ 1.75
CNEP1R1-203ENST00000458059 ABCA8O94911 1581 aa25.96■■□□□ 1.75
CNEP1R1-203ENST00000458059 SHANK2Q9UPX8 1470 aa25.95■■□□□ 1.75
CNEP1R1-203ENST00000458059 C20orf194Q5TEA3 1177 aa25.95■■□□□ 1.75
CNEP1R1-203ENST00000458059 NUP160Q12769 1436 aa25.95■■□□□ 1.75
CNEP1R1-203ENST00000458059 TESK2Q96S53 571 aa25.95■■□□□ 1.74
CNEP1R1-203ENST00000458059 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
CNEP1R1-203ENST00000458059 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
CNEP1R1-203ENST00000458059 ADAMTS8Q9UP79 889 aa25.92■■□□□ 1.74
CNEP1R1-203ENST00000458059 A2MP01023 1474 aa25.9■■□□□ 1.74
CNEP1R1-203ENST00000458059 PLA2R1Q13018 1463 aa25.9■■□□□ 1.74
CNEP1R1-203ENST00000458059 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
CNEP1R1-203ENST00000458059 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
CNEP1R1-203ENST00000458059 PLEKHH2Q8IVE3 1493 aa25.9■■□□□ 1.74
CNEP1R1-203ENST00000458059 TMF1P82094 1093 aa25.89■■□□□ 1.74
CNEP1R1-203ENST00000458059 TCERG1O14776 1098 aaKnown RBP25.88■■□□□ 1.73
CNEP1R1-203ENST00000458059 ARHGAP5Q13017 1502 aa25.87■■□□□ 1.73
CNEP1R1-203ENST00000458059 PDE3BQ13370 1112 aa25.86■■□□□ 1.73
CNEP1R1-203ENST00000458059 MYT1LQ9UL68 1186 aa25.86■■□□□ 1.73
CNEP1R1-203ENST00000458059 ERBINQ96RT1 1412 aa25.85■■□□□ 1.73
CNEP1R1-203ENST00000458059 E9PCH4 1651 aa25.84■■□□□ 1.73
CNEP1R1-203ENST00000458059 BACH2Q9BYV9 841 aa25.84■■□□□ 1.73
CNEP1R1-203ENST00000458059 CCDC146Q8IYE0 955 aa25.84■■□□□ 1.73
CNEP1R1-203ENST00000458059 TRPM1Q7Z4N2 1603 aa25.84■■□□□ 1.73
CNEP1R1-203ENST00000458059 SLC4A3P48751 1232 aa25.83■■□□□ 1.73
CNEP1R1-203ENST00000458059 CDC42BPBQ9Y5S2 1711 aa25.82■■□□□ 1.72
CNEP1R1-203ENST00000458059 KNSTRNQ9Y448 316 aa25.82■■□□□ 1.72
CNEP1R1-203ENST00000458059 WDR43Q15061 677 aaKnown RBP eCLIP25.81■■□□□ 1.72
CNEP1R1-203ENST00000458059 NEFMP07197 916 aa25.8■■□□□ 1.72
CNEP1R1-203ENST00000458059 COL17A1Q9UMD9 1497 aaPredicted RBP25.8■■□□□ 1.72
CNEP1R1-203ENST00000458059 ARHGEF5Q12774 1597 aa25.77■■□□□ 1.72
CNEP1R1-203ENST00000458059 RSPH4AQ5TD94 716 aa25.76■■□□□ 1.71
CNEP1R1-203ENST00000458059 PPP2R1AP30153 589 aa25.75■■□□□ 1.71
CNEP1R1-203ENST00000458059 TTC37Q6PGP7 1564 aa25.75■■□□□ 1.71
CNEP1R1-203ENST00000458059 PLEKHH1Q9ULM0 1364 aa25.74■■□□□ 1.71
CNEP1R1-203ENST00000458059 RGS3P49796 1198 aa25.73■■□□□ 1.71
CNEP1R1-203ENST00000458059 GPRASP1Q5JY77 1395 aa25.72■■□□□ 1.71
CNEP1R1-203ENST00000458059 RTN4Q9NQC3 1192 aaKnown RBP25.72■■□□□ 1.71
CNEP1R1-203ENST00000458059 AFAP1Q8N556 730 aa25.71■■□□□ 1.71
CNEP1R1-203ENST00000458059 PREX2Q70Z35 1606 aa25.7■■□□□ 1.71
CNEP1R1-203ENST00000458059 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
CNEP1R1-203ENST00000458059 MAGI2Q86UL8 1455 aa25.69■■□□□ 1.7
CNEP1R1-203ENST00000458059 PRDM15P57071 1507 aaPredicted RBP25.67■■□□□ 1.7
CNEP1R1-203ENST00000458059 DUSP27Q5VZP5 1158 aa25.67■■□□□ 1.7
CNEP1R1-203ENST00000458059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.67■■□□□ 1.7
CNEP1R1-203ENST00000458059 MYO5CQ9NQX4 1742 aa25.66■■□□□ 1.7
CNEP1R1-203ENST00000458059 MS4A1P11836 297 aa25.66■■□□□ 1.7
CNEP1R1-203ENST00000458059 SPINK5Q9NQ38 1064 aaPredicted RBP25.65■■□□□ 1.7
CNEP1R1-203ENST00000458059 WASHC2CQ9Y4E1 1318 aa25.65■■□□□ 1.7
CNEP1R1-203ENST00000458059 APAF1O14727 1248 aa25.65■■□□□ 1.7
CNEP1R1-203ENST00000458059 AMER1Q5JTC6 1135 aaPredicted RBP25.65■■□□□ 1.7
CNEP1R1-203ENST00000458059 GOLGA2Q08379 1002 aa25.64■■□□□ 1.7
CNEP1R1-203ENST00000458059 IL27Q8NEV9 243 aa25.64■■□□□ 1.69
CNEP1R1-203ENST00000458059 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
CNEP1R1-203ENST00000458059 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
CNEP1R1-203ENST00000458059 BCAR3O75815 825 aa25.61■■□□□ 1.69
CNEP1R1-203ENST00000458059 NEUROD2Q15784 382 aa25.61■■□□□ 1.69
CNEP1R1-203ENST00000458059 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
CNEP1R1-203ENST00000458059 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
CNEP1R1-203ENST00000458059 ZMYM4Q5VZL5 1548 aa25.59■■□□□ 1.69
CNEP1R1-203ENST00000458059 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
CNEP1R1-203ENST00000458059 WDR7Q9Y4E6 1490 aa25.59■■□□□ 1.69
CNEP1R1-203ENST00000458059 UNC13BO14795 1591 aa25.58■■□□□ 1.69
CNEP1R1-203ENST00000458059 DMRT2Q9Y5R5 561 aa25.58■■□□□ 1.69
CNEP1R1-203ENST00000458059 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
CNEP1R1-203ENST00000458059 CFAP70Q5T0N1 1121 aa25.57■■□□□ 1.68
CNEP1R1-203ENST00000458059 SPAG9O60271 1321 aaKnown RBP25.57■■□□□ 1.68
CNEP1R1-203ENST00000458059 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms