RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
TRAPPC12-212ENST00000457845 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
TRAPPC12-212ENST00000457845 UNC13BO14795 1591 aa17.74■□□□□ 0.43
TRAPPC12-212ENST00000457845 PRDM15P57071 1507 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC12-212ENST00000457845 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC12-212ENST00000457845 KDM4FA0A1W2PPD8 638 aa17.73■□□□□ 0.43
TRAPPC12-212ENST00000457845 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
TRAPPC12-212ENST00000457845 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
TRAPPC12-212ENST00000457845 ZC3H13Q5T200 1668 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-212ENST00000457845 RIMS1Q86UR5 1692 aaKnown RBP17.72■□□□□ 0.43
TRAPPC12-212ENST00000457845 VWDEQ8N2E2 1590 aa17.72■□□□□ 0.43
TRAPPC12-212ENST00000457845 MLECQ14165 292 aa17.72■□□□□ 0.43
TRAPPC12-212ENST00000457845 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
TRAPPC12-212ENST00000457845 GGT6Q6P531 493 aa17.71■□□□□ 0.43
TRAPPC12-212ENST00000457845 CEP152O94986 1710 aa17.7■□□□□ 0.42
TRAPPC12-212ENST00000457845 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
TRAPPC12-212ENST00000457845 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
TRAPPC12-212ENST00000457845 ABCC3O15438 1527 aa17.67■□□□□ 0.42
TRAPPC12-212ENST00000457845 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
TRAPPC12-212ENST00000457845 C3P01024 1663 aa17.67■□□□□ 0.42
TRAPPC12-212ENST00000457845 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
TRAPPC12-212ENST00000457845 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
TRAPPC12-212ENST00000457845 PTPRMP28827 1452 aa17.64■□□□□ 0.41
TRAPPC12-212ENST00000457845 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
TRAPPC12-212ENST00000457845 HRCP23327 699 aa17.63■□□□□ 0.41
TRAPPC12-212ENST00000457845 TET3O43151 1660 aa17.63■□□□□ 0.41
TRAPPC12-212ENST00000457845 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
TRAPPC12-212ENST00000457845 KANK1Q14678 1352 aa17.63■□□□□ 0.41
TRAPPC12-212ENST00000457845 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-212ENST00000457845 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-212ENST00000457845 ZMYM3Q14202 1370 aa17.62■□□□□ 0.41
TRAPPC12-212ENST00000457845 CFAP65Q6ZU64 1925 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-212ENST00000457845 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
TRAPPC12-212ENST00000457845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.411e-8■□□□□ 8.6
TRAPPC12-212ENST00000457845 NUP155O75694 1391 aa17.6■□□□□ 0.41
TRAPPC12-212ENST00000457845 ARHGAP31Q2M1Z3 1444 aa17.6■□□□□ 0.41
TRAPPC12-212ENST00000457845 EFCAB6Q5THR3 1501 aa17.58■□□□□ 0.41
TRAPPC12-212ENST00000457845 PZPP20742 1482 aa17.58■□□□□ 0.41
TRAPPC12-212ENST00000457845 E9PCH4 1651 aa17.58■□□□□ 0.4
TRAPPC12-212ENST00000457845 PREX1Q8TCU6 1659 aa17.56■□□□□ 0.4
TRAPPC12-212ENST00000457845 CEBPAP49715 358 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC12-212ENST00000457845 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
TRAPPC12-212ENST00000457845 NPATQ14207 1427 aa17.55■□□□□ 0.4
TRAPPC12-212ENST00000457845 SPATA31D1Q6ZQQ2 1576 aa17.53■□□□□ 0.4
TRAPPC12-212ENST00000457845 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
TRAPPC12-212ENST00000457845 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
TRAPPC12-212ENST00000457845 NOS1P29475 1434 aa17.49■□□□□ 0.39
TRAPPC12-212ENST00000457845 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC12-212ENST00000457845 SPHKAPQ2M3C7 1700 aa17.49■□□□□ 0.39
TRAPPC12-212ENST00000457845 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
TRAPPC12-212ENST00000457845 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
TRAPPC12-212ENST00000457845 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
TRAPPC12-212ENST00000457845 SYNMO15061 1565 aa17.46■□□□□ 0.39
TRAPPC12-212ENST00000457845 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
TRAPPC12-212ENST00000457845 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC12-212ENST00000457845 PTPRTO14522 1441 aa17.45■□□□□ 0.38
TRAPPC12-212ENST00000457845 PIK3C2BO00750 1634 aa17.44■□□□□ 0.38
TRAPPC12-212ENST00000457845 TNRQ92752 1358 aa17.44■□□□□ 0.38
TRAPPC12-212ENST00000457845 PKD2Q13563 968 aa17.44■□□□□ 0.38
TRAPPC12-212ENST00000457845 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
TRAPPC12-212ENST00000457845 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
TRAPPC12-212ENST00000457845 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
TRAPPC12-212ENST00000457845 PLA2R1Q13018 1463 aa17.41■□□□□ 0.38
TRAPPC12-212ENST00000457845 TRPM2O94759 1503 aa17.41■□□□□ 0.38
TRAPPC12-212ENST00000457845 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-212ENST00000457845 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.38
TRAPPC12-212ENST00000457845 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
TRAPPC12-212ENST00000457845 LMTK3Q96Q04 1460 aa17.39■□□□□ 0.37
TRAPPC12-212ENST00000457845 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC12-212ENST00000457845 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
TRAPPC12-212ENST00000457845 SLC52A1Q9NWF4 448 aa17.38■□□□□ 0.37
TRAPPC12-212ENST00000457845 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
TRAPPC12-212ENST00000457845 CLTCL1P53675 1640 aa17.37■□□□□ 0.37
TRAPPC12-212ENST00000457845 KIF1BO60333 1816 aa17.37■□□□□ 0.37
TRAPPC12-212ENST00000457845 UGGT1Q9NYU2 1555 aa17.36■□□□□ 0.37
TRAPPC12-212ENST00000457845 IDI1Q13907 227 aa17.36■□□□□ 0.37
TRAPPC12-212ENST00000457845 FOXD1Q16676 465 aa17.36■□□□□ 0.37
TRAPPC12-212ENST00000457845 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
TRAPPC12-212ENST00000457845 TMEM131LA2VDJ0 1609 aa17.34■□□□□ 0.37
TRAPPC12-212ENST00000457845 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
TRAPPC12-212ENST00000457845 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
TRAPPC12-212ENST00000457845 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
TRAPPC12-212ENST00000457845 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
TRAPPC12-212ENST00000457845 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC12-212ENST00000457845 STRCQ7RTU9 1775 aa17.28■□□□□ 0.36
TRAPPC12-212ENST00000457845 SLIT1O75093 1534 aa17.27■□□□□ 0.36
TRAPPC12-212ENST00000457845 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
TRAPPC12-212ENST00000457845 POLR1AO95602 1720 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC12-212ENST00000457845 HSPA2P54652 639 aa17.25■□□□□ 0.35
TRAPPC12-212ENST00000457845 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
TRAPPC12-212ENST00000457845 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
TRAPPC12-212ENST00000457845 IFT172Q9UG01 1749 aa17.23■□□□□ 0.35
TRAPPC12-212ENST00000457845 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
TRAPPC12-212ENST00000457845 PPLO60437 1756 aa17.23■□□□□ 0.35
TRAPPC12-212ENST00000457845 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
TRAPPC12-212ENST00000457845 NEXMIFQ5QGS0 1516 aa17.2■□□□□ 0.34
TRAPPC12-212ENST00000457845 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-212ENST00000457845 MED14O60244 1454 aa17.18■□□□□ 0.34
TRAPPC12-212ENST00000457845 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
TRAPPC12-212ENST00000457845 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms