RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 GGT6Q6P531 493 aa15.45■□□□□ 0.06
RFX3-210ENST00000457373 PTPRMP28827 1452 aa15.45■□□□□ 0.06
RFX3-210ENST00000457373 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
RFX3-210ENST00000457373 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
RFX3-210ENST00000457373 KIF3BO15066 747 aa15.43■□□□□ 0.06
RFX3-210ENST00000457373 ITGAEP38570 1179 aa15.42■□□□□ 0.06
RFX3-210ENST00000457373 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
RFX3-210ENST00000457373 SHANK2Q9UPX8 1470 aa15.41■□□□□ 0.06
RFX3-210ENST00000457373 CEBPAP49715 358 aaPredicted RBP15.39■□□□□ 0.05
RFX3-210ENST00000457373 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
RFX3-210ENST00000457373 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
RFX3-210ENST00000457373 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
RFX3-210ENST00000457373 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
RFX3-210ENST00000457373 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
RFX3-210ENST00000457373 PTPRKQ15262 1439 aa15.36■□□□□ 0.05
RFX3-210ENST00000457373 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
RFX3-210ENST00000457373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
RFX3-210ENST00000457373 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
RFX3-210ENST00000457373 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
RFX3-210ENST00000457373 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
RFX3-210ENST00000457373 C3P01024 1663 aa15.34■□□□□ 0.05
RFX3-210ENST00000457373 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
RFX3-210ENST00000457373 ADGRL2O95490 1459 aa15.33■□□□□ 0.05
RFX3-210ENST00000457373 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
RFX3-210ENST00000457373 RTN4Q9NQC3 1192 aaKnown RBP15.32■□□□□ 0.04
RFX3-210ENST00000457373 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
RFX3-210ENST00000457373 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
RFX3-210ENST00000457373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.047e-6■□□□□ 10.8
RFX3-210ENST00000457373 WASHC2CQ9Y4E1 1318 aa15.31■□□□□ 0.04
RFX3-210ENST00000457373 ERBINQ96RT1 1412 aa15.31■□□□□ 0.04
RFX3-210ENST00000457373 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
RFX3-210ENST00000457373 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.04
RFX3-210ENST00000457373 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.04
RFX3-210ENST00000457373 ROCK1Q13464 1354 aa15.27■□□□□ 0.04
RFX3-210ENST00000457373 CEP152O94986 1710 aa15.27■□□□□ 0.04
RFX3-210ENST00000457373 MROH1Q8NDA8 1641 aa15.27■□□□□ 0.03
RFX3-210ENST00000457373 SETD1BQ9UPS6 1966 aaKnown RBP15.26■□□□□ 0.03
RFX3-210ENST00000457373 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
RFX3-210ENST00000457373 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
RFX3-210ENST00000457373 CFAP65Q6ZU64 1925 aaKnown RBP15.24■□□□□ 0.03
RFX3-210ENST00000457373 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
RFX3-210ENST00000457373 KANK1Q14678 1352 aa15.24■□□□□ 0.03
RFX3-210ENST00000457373 ABCC3O15438 1527 aa15.23■□□□□ 0.03
RFX3-210ENST00000457373 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
RFX3-210ENST00000457373 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
RFX3-210ENST00000457373 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
RFX3-210ENST00000457373 DEPDC5O75140 1603 aa15.23■□□□□ 0.03
RFX3-210ENST00000457373 PRDM15P57071 1507 aaPredicted RBP15.22■□□□□ 0.03
RFX3-210ENST00000457373 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
RFX3-210ENST00000457373 HSPA2P54652 639 aa15.22■□□□□ 0.03
RFX3-210ENST00000457373 UHRF1BP1Q6BDS2 1440 aa15.21■□□□□ 0.03
RFX3-210ENST00000457373 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.02
RFX3-210ENST00000457373 NPATQ14207 1427 aa15.2■□□□□ 0.02
RFX3-210ENST00000457373 PZPP20742 1482 aa15.2■□□□□ 0.02
RFX3-210ENST00000457373 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
RFX3-210ENST00000457373 VWDEQ8N2E2 1590 aa15.17■□□□□ 0.02
RFX3-210ENST00000457373 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
RFX3-210ENST00000457373 NAIPQ13075 1403 aa15.17■□□□□ 0.02
RFX3-210ENST00000457373 UNC13BO14795 1591 aa15.16■□□□□ 0.02
RFX3-210ENST00000457373 TNRQ92752 1358 aa15.16■□□□□ 0.02
RFX3-210ENST00000457373 MYO3AQ8NEV4 1616 aa15.15■□□□□ 0.02
RFX3-210ENST00000457373 NUP155O75694 1391 aa15.14■□□□□ 0.01
RFX3-210ENST00000457373 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
RFX3-210ENST00000457373 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
RFX3-210ENST00000457373 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
RFX3-210ENST00000457373 ARHGAP31Q2M1Z3 1444 aa15.13■□□□□ 0.01
RFX3-210ENST00000457373 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
RFX3-210ENST00000457373 ERVK-7P63135 1459 aa15.13■□□□□ 0.01
RFX3-210ENST00000457373 SPATA31D1Q6ZQQ2 1576 aa15.12■□□□□ 0.01
RFX3-210ENST00000457373 CEP170BQ9Y4F5 1589 aaPredicted RBP15.11■□□□□ 0.01
RFX3-210ENST00000457373 TET3O43151 1660 aa15.11■□□□□ 0.01
RFX3-210ENST00000457373 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
RFX3-210ENST00000457373 ZNF142P52746 1687 aaPredicted RBP15.1■□□□□ 0.01
RFX3-210ENST00000457373 EFCAB6Q5THR3 1501 aa15.1■□□□□ 0.01
RFX3-210ENST00000457373 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
RFX3-210ENST00000457373 E9PCH4 1651 aa15.07■□□□□ 0
RFX3-210ENST00000457373 NLRP1Q9C000 1473 aa15.07■□□□□ 0
RFX3-210ENST00000457373 STRCQ7RTU9 1775 aa15.06■□□□□ 0
RFX3-210ENST00000457373 FKBP8Q14318 412 aa15.06■□□□□ 0
RFX3-210ENST00000457373 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
RFX3-210ENST00000457373 NCKAP5LQ9HCH0 1330 aa15.05■□□□□ -0
RFX3-210ENST00000457373 UGGT1Q9NYU2 1555 aa15.05■□□□□ -0
RFX3-210ENST00000457373 SYNMO15061 1565 aa15.04■□□□□ -0
RFX3-210ENST00000457373 RPRD2Q5VT52 1461 aaKnown RBP15.04■□□□□ -0
RFX3-210ENST00000457373 NOS1P29475 1434 aa15.04■□□□□ -0
RFX3-210ENST00000457373 SETD5Q9C0A6 1442 aa15.04■□□□□ -0
RFX3-210ENST00000457373 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
RFX3-210ENST00000457373 IDI1Q13907 227 aa15.03■□□□□ -0
RFX3-210ENST00000457373 PIK3C2BO00750 1634 aa15.03■□□□□ -0
RFX3-210ENST00000457373 UBR1Q8IWV7 1749 aa15.02□□□□□ -0.01
RFX3-210ENST00000457373 PKD2Q13563 968 aa15.01□□□□□ -0.01
RFX3-210ENST00000457373 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
RFX3-210ENST00000457373 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
RFX3-210ENST00000457373 PLA2R1Q13018 1463 aa15□□□□□ -0.01
RFX3-210ENST00000457373 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
RFX3-210ENST00000457373 ANKLE2Q86XL3 938 aa14.99□□□□□ -0.01
RFX3-210ENST00000457373 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
RFX3-210ENST00000457373 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
RFX3-210ENST00000457373 MYO5BQ9ULV0 1848 aa14.97□□□□□ -0.01
RFX3-210ENST00000457373 MPHOSPH9Q99550 1183 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms