RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 AKNAQ7Z591 1439 aa3.8□□□□□ -1.8
NEDD1-204ENST00000457368 LTBP4Q8N2S1 1624 aa3.8□□□□□ -1.8
NEDD1-204ENST00000457368 C7P10643 843 aa3.8□□□□□ -1.8
NEDD1-204ENST00000457368 ATP10BO94823 1461 aa3.8□□□□□ -1.8
NEDD1-204ENST00000457368 ARHGEF12Q9NZN5 1544 aa3.8□□□□□ -1.8
NEDD1-204ENST00000457368 SLAIN1Q8ND83 568 aa3.79□□□□□ -1.8
NEDD1-204ENST00000457368 DENND4BO75064 1496 aaPredicted RBP3.79□□□□□ -1.8
NEDD1-204ENST00000457368 PLCG2P16885 1265 aa3.79□□□□□ -1.8
NEDD1-204ENST00000457368 VASPP50552 380 aaPredicted RBP3.79□□□□□ -1.8
NEDD1-204ENST00000457368 ASTLQ6HA08 431 aaPredicted RBP3.79□□□□□ -1.8
NEDD1-204ENST00000457368 ZBTB47Q9UFB7 747 aaPredicted RBP3.79□□□□□ -1.8
NEDD1-204ENST00000457368 RIMS1Q86UR5 1692 aaKnown RBP3.79□□□□□ -1.8
NEDD1-204ENST00000457368 RAPGEF3O95398 923 aa3.79□□□□□ -1.8
NEDD1-204ENST00000457368 EFCAB5A4FU69 1503 aa3.78□□□□□ -1.8
NEDD1-204ENST00000457368 NUBP1P53384 320 aa3.78□□□□□ -1.8
NEDD1-204ENST00000457368 PROM2Q8N271 834 aa3.78□□□□□ -1.8
NEDD1-204ENST00000457368 KCNH8Q96L42 1107 aa3.78□□□□□ -1.8
NEDD1-204ENST00000457368 POTEFA5A3E0 1075 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 RICTORQ6R327 1708 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 PREX1Q8TCU6 1659 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 TTBK1Q5TCY1 1321 aaPredicted RBP3.77□□□□□ -1.81
NEDD1-204ENST00000457368 ZFYVE16Q7Z3T8 1539 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 STRCQ7RTU9 1775 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 CFAP74Q9C0B2 1584 aa3.77□□□□□ -1.81
NEDD1-204ENST00000457368 ARID4BQ4LE39 1312 aaPredicted RBP3.77□□□□□ -1.81
NEDD1-204ENST00000457368 FBXO3Q9UK99 471 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 UHRF1BP1Q6BDS2 1440 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 MAMSTRQ6ZN01 415 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 NCOA1Q15788 1441 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 C9orf84Q5VXU9 1444 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 REREQ9P2R6 1566 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 ATP10AO60312 1499 aa3.76□□□□□ -1.81
NEDD1-204ENST00000457368 CABP2Q9NPB3 220 aa3.75□□□□□ -1.81
NEDD1-204ENST00000457368 PRXQ9BXM0 1461 aa3.75□□□□□ -1.81
NEDD1-204ENST00000457368 SETD1BQ9UPS6 1966 aaKnown RBP3.75□□□□□ -1.81
NEDD1-204ENST00000457368 TIE1P35590 1138 aa3.75□□□□□ -1.81
NEDD1-204ENST00000457368 MKRN3Q13064 507 aaKnown RBP3.75□□□□□ -1.81
NEDD1-204ENST00000457368 FAM9AQ8IZU1 332 aaPredicted RBP3.75□□□□□ -1.81
NEDD1-204ENST00000457368 SIGLEC1Q9BZZ2 1709 aa3.75□□□□□ -1.81
NEDD1-204ENST00000457368 AGLP35573 1532 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 TRAPPC8Q9Y2L5 1435 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 C3orf67Q6ZVT6 689 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 FER1L4A9Z1Z3 1794 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 HECW1Q76N89 1606 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 NPATQ14207 1427 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 CTTNBP2Q8WZ74 1663 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 PLA2R1Q13018 1463 aa3.74□□□□□ -1.81
NEDD1-204ENST00000457368 NUP153P49790 1475 aaKnown RBP3.73□□□□□ -1.81
NEDD1-204ENST00000457368 DPY19L2Q6NUT2 758 aa3.73□□□□□ -1.81
NEDD1-204ENST00000457368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.73□□□□□ -1.811e-9■■■■□ 20.2
NEDD1-204ENST00000457368 PLCH2O75038 1416 aa3.73□□□□□ -1.81
NEDD1-204ENST00000457368 CNTLNQ9NXG0 1405 aa3.73□□□□□ -1.81
NEDD1-204ENST00000457368 MED1Q15648 1581 aaPredicted RBP3.73□□□□□ -1.81
NEDD1-204ENST00000457368 SAMD9Q5K651 1589 aa3.73□□□□□ -1.81
NEDD1-204ENST00000457368 IFNLR1Q8IU57 520 aaPredicted RBP3.73□□□□□ -1.81
NEDD1-204ENST00000457368 RAPGEF6Q8TEU7 1601 aa3.72□□□□□ -1.81
NEDD1-204ENST00000457368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.72□□□□□ -1.81
NEDD1-204ENST00000457368 KDM5CP41229 1560 aa3.72□□□□□ -1.81
NEDD1-204ENST00000457368 PKD2Q13563 968 aa3.72□□□□□ -1.81
NEDD1-204ENST00000457368 TCOF1Q13428 1488 aaKnown RBP3.72□□□□□ -1.81
NEDD1-204ENST00000457368 SCAPERQ9BY12 1400 aa3.72□□□□□ -1.81
NEDD1-204ENST00000457368 G3V3G9 751 aa3.71□□□□□ -1.81
NEDD1-204ENST00000457368 MLH3Q9UHC1 1453 aa3.71□□□□□ -1.81
NEDD1-204ENST00000457368 PLEKHD1A6NEE1 506 aa3.71□□□□□ -1.82
NEDD1-204ENST00000457368 PSEN1P49768 467 aa3.71□□□□□ -1.82
NEDD1-204ENST00000457368 ZNF518AQ6AHZ1 1483 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 CPS1P31327 1500 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 UBAP1LF5GYI3 381 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 SUPT5HO00267 1087 aaKnown RBP3.7□□□□□ -1.82
NEDD1-204ENST00000457368 CEBPAP49715 358 aaPredicted RBP3.7□□□□□ -1.82
NEDD1-204ENST00000457368 FAM205CA6NFA0 338 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 ST18O60284 1047 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 CDAN1Q8IWY9 1227 aa3.7□□□□□ -1.82
NEDD1-204ENST00000457368 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
NEDD1-204ENST00000457368 EFCAB2Q5VUJ9 269 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 OCEL1Q9H607 264 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 DIP2CQ9Y2E4 1556 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.69□□□□□ -1.82
NEDD1-204ENST00000457368 C3P01024 1663 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 MROH2AA6NES4 1674 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 HSPA1LP34931 641 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 MLECQ14165 292 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 CAMSAP1Q5T5Y3 1602 aa3.69□□□□□ -1.82
NEDD1-204ENST00000457368 ZNF335Q9H4Z2 1342 aaPredicted RBP3.69□□□□□ -1.82
NEDD1-204ENST00000457368 ZNF142P52746 1687 aaPredicted RBP3.68□□□□□ -1.82
NEDD1-204ENST00000457368 ZNF467Q7Z7K2 595 aaPredicted RBP3.68□□□□□ -1.82
NEDD1-204ENST00000457368 SPOCK2Q92563 424 aa3.68□□□□□ -1.82
NEDD1-204ENST00000457368 PTPRKQ15262 1439 aa3.68□□□□□ -1.82
NEDD1-204ENST00000457368 TOM1O60784 492 aa3.68□□□□□ -1.82
NEDD1-204ENST00000457368 GSE1Q14687 1217 aa3.68□□□□□ -1.82
NEDD1-204ENST00000457368 EMP3P54852 163 aa3.67□□□□□ -1.82
NEDD1-204ENST00000457368 ALKQ9UM73 1620 aa3.67□□□□□ -1.82
NEDD1-204ENST00000457368 ZMYM3Q14202 1370 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 IRX5P78411 483 aaPredicted RBP3.66□□□□□ -1.82
NEDD1-204ENST00000457368 EFCAB3Q8N7B9 438 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 SHANK2Q9UPX8 1470 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 CEP170BQ9Y4F5 1589 aaPredicted RBP3.66□□□□□ -1.82
NEDD1-204ENST00000457368 NCKAP5LQ9HCH0 1330 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 A2ML1A8K2U0 1454 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 ARID3CA6NKF2 412 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms