RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 GCC2Q8IWJ2 1684 aa25.86■■□□□ 1.73
PMPCB-206ENST00000456433 MLECQ14165 292 aa25.85■■□□□ 1.73
PMPCB-206ENST00000456433 MROH1Q8NDA8 1641 aa25.85■■□□□ 1.73
PMPCB-206ENST00000456433 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
PMPCB-206ENST00000456433 PRDM15P57071 1507 aaPredicted RBP25.83■■□□□ 1.72
PMPCB-206ENST00000456433 NAIPQ13075 1403 aa25.82■■□□□ 1.72
PMPCB-206ENST00000456433 CNTLNQ9NXG0 1405 aa25.82■■□□□ 1.72
PMPCB-206ENST00000456433 RIMS1Q86UR5 1692 aaKnown RBP25.8■■□□□ 1.72
PMPCB-206ENST00000456433 KDM5DQ9BY66 1539 aa25.8■■□□□ 1.72
PMPCB-206ENST00000456433 GGT6Q6P531 493 aa25.8■■□□□ 1.72
PMPCB-206ENST00000456433 MROH2AA6NES4 1674 aa25.79■■□□□ 1.72
PMPCB-206ENST00000456433 ZC3H13Q5T200 1668 aaKnown RBP25.77■■□□□ 1.72
PMPCB-206ENST00000456433 UNC13BO14795 1591 aa25.77■■□□□ 1.72
PMPCB-206ENST00000456433 PTPRMP28827 1452 aa25.76■■□□□ 1.71
PMPCB-206ENST00000456433 VWDEQ8N2E2 1590 aa25.76■■□□□ 1.71
PMPCB-206ENST00000456433 CLTCQ00610 1675 aaKnown RBP25.75■■□□□ 1.71
PMPCB-206ENST00000456433 ABCC3O15438 1527 aa25.73■■□□□ 1.71
PMPCB-206ENST00000456433 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
PMPCB-206ENST00000456433 LMTK2Q8IWU2 1503 aa25.7■■□□□ 1.7
PMPCB-206ENST00000456433 KANK1Q14678 1352 aa25.69■■□□□ 1.7
PMPCB-206ENST00000456433 C3P01024 1663 aa25.69■■□□□ 1.7
PMPCB-206ENST00000456433 CEP152O94986 1710 aa25.68■■□□□ 1.7
PMPCB-206ENST00000456433 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
PMPCB-206ENST00000456433 ZMYM3Q14202 1370 aa25.67■■□□□ 1.7
PMPCB-206ENST00000456433 IQGAP3Q86VI3 1631 aa25.66■■□□□ 1.7
PMPCB-206ENST00000456433 SETD5Q9C0A6 1442 aa25.65■■□□□ 1.7
PMPCB-206ENST00000456433 CAMSAP1Q5T5Y3 1602 aa25.65■■□□□ 1.7
PMPCB-206ENST00000456433 TRIM26Q12899 539 aaPredicted RBP25.63■■□□□ 1.69
PMPCB-206ENST00000456433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.693e-9■■□□□ 11.8
PMPCB-206ENST00000456433 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
PMPCB-206ENST00000456433 PZPP20742 1482 aa25.62■■□□□ 1.69
PMPCB-206ENST00000456433 TET3O43151 1660 aa25.61■■□□□ 1.69
PMPCB-206ENST00000456433 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
PMPCB-206ENST00000456433 SETD1BQ9UPS6 1966 aaKnown RBP25.6■■□□□ 1.69
PMPCB-206ENST00000456433 NPATQ14207 1427 aa25.6■■□□□ 1.69
PMPCB-206ENST00000456433 NUP155O75694 1391 aa25.59■■□□□ 1.69
PMPCB-206ENST00000456433 EFCAB6Q5THR3 1501 aa25.59■■□□□ 1.69
PMPCB-206ENST00000456433 CEBPAP49715 358 aaPredicted RBP25.56■■□□□ 1.68
PMPCB-206ENST00000456433 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
PMPCB-206ENST00000456433 RPRD2Q5VT52 1461 aaKnown RBP25.54■■□□□ 1.68
PMPCB-206ENST00000456433 HRCP23327 699 aa25.54■■□□□ 1.68
PMPCB-206ENST00000456433 SPATA31D1Q6ZQQ2 1576 aa25.52■■□□□ 1.68
PMPCB-206ENST00000456433 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
PMPCB-206ENST00000456433 PREX1Q8TCU6 1659 aa25.5■■□□□ 1.67
PMPCB-206ENST00000456433 E9PCH4 1651 aa25.49■■□□□ 1.67
PMPCB-206ENST00000456433 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
PMPCB-206ENST00000456433 PLPPR3Q6T4P5 718 aa25.47■■□□□ 1.67
PMPCB-206ENST00000456433 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
PMPCB-206ENST00000456433 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
PMPCB-206ENST00000456433 NOS1P29475 1434 aa25.46■■□□□ 1.67
PMPCB-206ENST00000456433 TNRQ92752 1358 aa25.44■■□□□ 1.66
PMPCB-206ENST00000456433 MYO3AQ8NEV4 1616 aa25.44■■□□□ 1.66
PMPCB-206ENST00000456433 UHRF1BP1Q6BDS2 1440 aa25.42■■□□□ 1.66
PMPCB-206ENST00000456433 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
PMPCB-206ENST00000456433 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
PMPCB-206ENST00000456433 LMTK3Q96Q04 1460 aa25.4■■□□□ 1.66
PMPCB-206ENST00000456433 SYNMO15061 1565 aa25.39■■□□□ 1.66
PMPCB-206ENST00000456433 SLC4A1APQ9BWU0 796 aaKnown RBP25.39■■□□□ 1.66
PMPCB-206ENST00000456433 PTPRTO14522 1441 aa25.37■■□□□ 1.65
PMPCB-206ENST00000456433 CEP170BQ9Y4F5 1589 aaPredicted RBP25.37■■□□□ 1.65
PMPCB-206ENST00000456433 SPHKAPQ2M3C7 1700 aa25.37■■□□□ 1.65
PMPCB-206ENST00000456433 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
PMPCB-206ENST00000456433 MPHOSPH9Q99550 1183 aa25.36■■□□□ 1.65
PMPCB-206ENST00000456433 PKD2Q13563 968 aa25.35■■□□□ 1.65
PMPCB-206ENST00000456433 PIK3C2BO00750 1634 aa25.34■■□□□ 1.65
PMPCB-206ENST00000456433 TRPM2O94759 1503 aa25.32■■□□□ 1.64
PMPCB-206ENST00000456433 SLC52A1Q9NWF4 448 aa25.31■■□□□ 1.64
PMPCB-206ENST00000456433 KDM5AP29375 1690 aaKnown RBP25.31■■□□□ 1.64
PMPCB-206ENST00000456433 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
PMPCB-206ENST00000456433 UGGT1Q9NYU2 1555 aa25.27■■□□□ 1.64
PMPCB-206ENST00000456433 UBR1Q8IWV7 1749 aa25.26■■□□□ 1.63
PMPCB-206ENST00000456433 IDI1Q13907 227 aa25.25■■□□□ 1.63
PMPCB-206ENST00000456433 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
PMPCB-206ENST00000456433 ADGRB3O60242 1522 aa25.23■■□□□ 1.63
PMPCB-206ENST00000456433 CLTCL1P53675 1640 aa25.22■■□□□ 1.63
PMPCB-206ENST00000456433 FOXD1Q16676 465 aa25.2■■□□□ 1.62
PMPCB-206ENST00000456433 TMEM131LA2VDJ0 1609 aa25.19■■□□□ 1.62
PMPCB-206ENST00000456433 THEMISQ8N1K5 641 aaPredicted RBP25.19■■□□□ 1.62
PMPCB-206ENST00000456433 HSPA2P54652 639 aa25.18■■□□□ 1.62
PMPCB-206ENST00000456433 ANKRD30BQ9BXX2 1392 aa25.17■■□□□ 1.62
PMPCB-206ENST00000456433 SLIT1O75093 1534 aa25.17■■□□□ 1.62
PMPCB-206ENST00000456433 MYO5BQ9ULV0 1848 aa25.16■■□□□ 1.62
PMPCB-206ENST00000456433 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
PMPCB-206ENST00000456433 KIF1BO60333 1816 aa25.15■■□□□ 1.62
PMPCB-206ENST00000456433 CCDC144AA2RUR9 1427 aa25.14■■□□□ 1.62
PMPCB-206ENST00000456433 STRCQ7RTU9 1775 aa25.13■■□□□ 1.61
PMPCB-206ENST00000456433 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
PMPCB-206ENST00000456433 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
PMPCB-206ENST00000456433 NEURL4Q96JN8 1562 aa25.12■■□□□ 1.61
PMPCB-206ENST00000456433 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
PMPCB-206ENST00000456433 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
PMPCB-206ENST00000456433 ZFYVE9O95405 1425 aa25.07■■□□□ 1.6
PMPCB-206ENST00000456433 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
PMPCB-206ENST00000456433 MED14O60244 1454 aa25.05■■□□□ 1.6
PMPCB-206ENST00000456433 SCAF11Q99590 1463 aaKnown RBP25.05■■□□□ 1.6
PMPCB-206ENST00000456433 ANKLE2Q86XL3 938 aa25.05■■□□□ 1.6
PMPCB-206ENST00000456433 CHGAP10645 457 aaKnown RBP25.04■■□□□ 1.6
PMPCB-206ENST00000456433 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
PMPCB-206ENST00000456433 LTKP29376 864 aa25■■□□□ 1.59
PMPCB-206ENST00000456433 EID1Q9Y6B2 187 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms