RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RPRD2Q5VT52 1461 aaKnown RBP5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 KIF27Q86VH2 1401 aa5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 ZNF521Q96K83 1311 aa5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 ADAMTS8Q9UP79 889 aa5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 CD2BP2O95400 341 aaKnown RBP5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 RLBP1P12271 317 aa5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 DNAH14Q0VDD8 3507 aa5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 CAMSAP2Q08AD1 1489 aa5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 MYO15AQ9UKN7 3530 aa5.97□□□□□ -1.45
DEPDC1-202ENST00000456315 ARID3AQ99856 593 aa5.96□□□□□ -1.45
DEPDC1-202ENST00000456315 SNAPC4Q5SXM2 1469 aa5.96□□□□□ -1.45
DEPDC1-202ENST00000456315 RTEL1-TNFRSF6BF6WH68 1400 aa5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 USP47Q96K76 1375 aa5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 CLASP1Q7Z460 1538 aa5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 BIVM-ERCC5R4GMW8 1640 aa5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.96□□□□□ -1.46
DEPDC1-202ENST00000456315 FMN1Q68DA7 1419 aa5.95□□□□□ -1.46
DEPDC1-202ENST00000456315 ESPNB1AK53 854 aa5.95□□□□□ -1.46
DEPDC1-202ENST00000456315 TESK2Q96S53 571 aa5.95□□□□□ -1.46
DEPDC1-202ENST00000456315 ZBTB22O15209 634 aa5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 ZNF608Q9ULD9 1512 aaPredicted RBP5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 PNNQ9H307 717 aaKnown RBP5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 NAP1L5Q96NT1 182 aaPredicted RBP5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 ZHX1Q9UKY1 873 aaPredicted RBP5.94□□□□□ -1.46
DEPDC1-202ENST00000456315 MCM4P33991 863 aa5.93□□□□□ -1.46
DEPDC1-202ENST00000456315 ABCA5Q8WWZ7 1642 aa5.93□□□□□ -1.46
DEPDC1-202ENST00000456315 WDFY3Q8IZQ1 3526 aa5.93□□□□□ -1.46
DEPDC1-202ENST00000456315 PRDM10Q9NQV6 1147 aa5.93□□□□□ -1.46
DEPDC1-202ENST00000456315 IGSF3O75054 1194 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 RBM42Q9BTD8 480 aaKnown RBP5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 KDM2AQ9Y2K7 1162 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 MTUS2Q5JR59 1369 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 RRP9O43818 475 aaKnown RBP5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 PANK1Q8TE04 598 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 PARD3Q8TEW0 1356 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 DDIT3P35638 169 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 SPEGQ15772 3267 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 FAM177BA6PVY3 158 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 CC2D1BQ5T0F9 858 aaKnown RBP5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 PZPP20742 1482 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 MBD5Q9P267 1494 aa5.92□□□□□ -1.46
DEPDC1-202ENST00000456315 FGD1P98174 961 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 SLC4A1APQ9BWU0 796 aaKnown RBP5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 RAD54L2Q9Y4B4 1467 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 ZSCAN20P17040 1043 aaPredicted RBP5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 PKP1Q13835 747 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 KIF2CQ99661 725 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 SHROOM2Q13796 1616 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 FGD5Q6ZNL6 1462 aa5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 GTF2E1P29083 439 aaPredicted RBP5.91□□□□□ -1.46
DEPDC1-202ENST00000456315 BCL2L13Q9BXK5 485 aa5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 CASKIN1Q8WXD9 1431 aa5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 TRMT2AQ8IZ69 625 aaKnown RBP5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 COG6Q9Y2V7 657 aa5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 CFAP43Q8NDM7 1665 aa5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 KTN1Q86UP2 1357 aaKnown RBP5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 MPNDQ8N594 471 aa5.9□□□□□ -1.46
DEPDC1-202ENST00000456315 TCHHQ07283 1943 aa5.9□□□□□ -1.47
DEPDC1-202ENST00000456315 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.47
DEPDC1-202ENST00000456315 TBC1D32Q96NH3 1257 aa5.9□□□□□ -1.47
DEPDC1-202ENST00000456315 NLRP13Q86W25 1043 aa5.89□□□□□ -1.47
DEPDC1-202ENST00000456315 DDRGK1Q96HY6 314 aa5.89□□□□□ -1.47
DEPDC1-202ENST00000456315 TRAK2O60296 914 aa5.89□□□□□ -1.47
DEPDC1-202ENST00000456315 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
DEPDC1-202ENST00000456315 PANK3Q9H999 370 aa5.89□□□□□ -1.47
DEPDC1-202ENST00000456315 KDM5CP41229 1560 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 MYBBP1AQ9BQG0 1328 aaKnown RBP5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 BRD4O60885 1362 aaPredicted RBP5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 ARHGEF11O15085 1522 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 DISP3Q9P2K9 1392 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 PKD2Q13563 968 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 NSFL1CQ9UNZ2 370 aaKnown RBP5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 APAF1O14727 1248 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 MIA2Q96PC5 1412 aa5.88□□□□□ -1.47
DEPDC1-202ENST00000456315 DTNBO60941 627 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 CLUAP1Q96AJ1 413 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 AMER1Q5JTC6 1135 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 ZNF710Q8N1W2 664 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 BCL11BQ9C0K0 894 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 MAGI2Q86UL8 1455 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 GRPEL1Q9HAV7 217 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 CENPQQ7L2Z9 268 aaPredicted RBP5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 ABCC5O15440 1437 aa5.87□□□□□ -1.47
DEPDC1-202ENST00000456315 CARD11Q9BXL7 1154 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 POLR1AO95602 1720 aaPredicted RBP5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 EYSQ5T1H1 3165 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 KIAA0586Q9BVV6 1533 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 MYH16Q9H6N6 1097 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 TDRD9Q8NDG6 1382 aaKnown RBP5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 FAM13BQ9NYF5 915 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 NESP48681 1621 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 CDK13Q14004 1512 aaKnown RBP5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 FYCO1Q9BQS8 1478 aa5.86□□□□□ -1.47
DEPDC1-202ENST00000456315 STAC3Q96MF2 364 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms